RNA–Protein interactions for RNA: ENST00000296444.6

SHISA5-201, Transcript of shisa family member 5, humanhuman

TSL 1 (best) BASIC

Gene SHISA5, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-201ENST00000296444 DPYSQ14117 519 aa24.9■■□□□ 1.58
SHISA5-201ENST00000296444 BTBD8Q5XKL5 378 aa24.9■■□□□ 1.58
SHISA5-201ENST00000296444 TTC19Q6DKK2 380 aaPredicted RBP24.9■■□□□ 1.58
SHISA5-201ENST00000296444 RFX8Q6ZV50 586 aa24.9■■□□□ 1.58
SHISA5-201ENST00000296444 ZNF473Q8WTR7 871 aaKnown RBP24.9■■□□□ 1.58
SHISA5-201ENST00000296444 IRGQQ8WZA9 623 aa24.9■■□□□ 1.58
SHISA5-201ENST00000296444 PRCCQ92733 491 aaPredicted RBP24.9■■□□□ 1.58
SHISA5-201ENST00000296444 PGAP3Q96FM1 320 aaPredicted RBP24.9■■□□□ 1.58
SHISA5-201ENST00000296444 CLSTN3Q9BQT9 956 aa24.9■■□□□ 1.58
SHISA5-201ENST00000296444 TMEM175Q9BSA9 504 aa24.9■■□□□ 1.58
SHISA5-201ENST00000296444 ARHGEF37A1IGU5 675 aa24.9■■□□□ 1.58
SHISA5-201ENST00000296444 AVILO75366 819 aa24.9■■□□□ 1.58
SHISA5-201ENST00000296444 SEC24AO95486 1093 aa24.9■■□□□ 1.58
SHISA5-201ENST00000296444 SRGAP2BP0DMP2 458 aa24.9■■□□□ 1.58
SHISA5-201ENST00000296444 ERCC2P18074 760 aa24.9■■□□□ 1.58
SHISA5-201ENST00000296444 ACTN3Q08043 901 aaPredicted RBP24.9■■□□□ 1.58
SHISA5-201ENST00000296444 NFE2Q16621 373 aaPredicted RBP24.9■■□□□ 1.58
SHISA5-201ENST00000296444 OR12D3Q9UGF7 316 aa24.9■■□□□ 1.58
SHISA5-201ENST00000296444 MYO16Q9Y6X6 1858 aa24.9■■□□□ 1.58
SHISA5-201ENST00000296444 EEF2KO00418 725 aaKnown RBP24.89■■□□□ 1.58
SHISA5-201ENST00000296444 NUMBP49757 651 aa24.89■■□□□ 1.58
SHISA5-201ENST00000296444 EFHC2Q5JST6 749 aa24.89■■□□□ 1.58
SHISA5-201ENST00000296444 CCDC13Q8IYE1 715 aa24.89■■□□□ 1.58
SHISA5-201ENST00000296444 EPS8L3Q8TE67 593 aaKnown RBP24.89■■□□□ 1.58
SHISA5-201ENST00000296444 RNF34Q969K3 372 aa24.89■■□□□ 1.58
SHISA5-201ENST00000296444 RBM15Q96T37 977 aaKnown RBP eCLIP24.89■■□□□ 1.58
SHISA5-201ENST00000296444 NINJ2Q9NZG7 142 aa24.89■■□□□ 1.58
SHISA5-201ENST00000296444 COL4A4P53420 1690 aaPredicted RBP24.89■■□□□ 1.58
SHISA5-201ENST00000296444 HMGB1P1B2RPK0 211 aaPredicted RBP24.89■■□□□ 1.57
SHISA5-201ENST00000296444 MOCS2O96007 188 aaPredicted RBP24.89■■□□□ 1.57
SHISA5-201ENST00000296444 TGM2P21980 687 aa24.89■■□□□ 1.57
SHISA5-201ENST00000296444 DNAJB2P25686 324 aa24.89■■□□□ 1.57
SHISA5-201ENST00000296444 ARL4AP40617 200 aa24.89■■□□□ 1.57
SHISA5-201ENST00000296444 TAF10Q12962 218 aa24.89■■□□□ 1.57
SHISA5-201ENST00000296444 FUBP3Q96I24 572 aaKnown RBP eCLIP24.89■■□□□ 1.57
SHISA5-201ENST00000296444 CXXC1Q9P0U4 656 aaPredicted RBP24.89■■□□□ 1.57
SHISA5-201ENST00000296444 BCCIPQ9P287 314 aaKnown RBP eCLIP24.89■■□□□ 1.57
SHISA5-201ENST00000296444 MAGED2Q9UNF1 606 aaPredicted RBP24.89■■□□□ 1.57
SHISA5-201ENST00000296444 DCLK1O15075 740 aa24.88■■□□□ 1.57
SHISA5-201ENST00000296444 LRIG2O94898 1065 aa24.88■■□□□ 1.57
SHISA5-201ENST00000296444 METTL18O95568 372 aa24.88■■□□□ 1.57
SHISA5-201ENST00000296444 HSPA1AP0DMV8 641 aaKnown RBP24.88■■□□□ 1.57
SHISA5-201ENST00000296444 HSPA1BP0DMV9 641 aaKnown RBP24.88■■□□□ 1.57
SHISA5-201ENST00000296444 NR1D1P20393 614 aa24.88■■□□□ 1.57
SHISA5-201ENST00000296444 BASP1P80723 227 aaKnown RBP24.88■■□□□ 1.57
SHISA5-201ENST00000296444 RNF168Q8IYW5 571 aaPredicted RBP24.88■■□□□ 1.57
SHISA5-201ENST00000296444 AGGF1Q8N302 714 aaeCLIP24.88■■□□□ 1.57
SHISA5-201ENST00000296444 NAT8LQ8N9F0 302 aa24.88■■□□□ 1.57
SHISA5-201ENST00000296444 C8orf48Q96LL4 319 aa24.88■■□□□ 1.57
SHISA5-201ENST00000296444 NDFIP2Q9NV92 336 aa24.88■■□□□ 1.57
SHISA5-201ENST00000296444 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.88■■□□□ 1.57
SHISA5-201ENST00000296444 TLDC2A0PJX2 215 aa24.88■■□□□ 1.57
SHISA5-201ENST00000296444 OR6C75A6NL08 312 aa24.88■■□□□ 1.57
SHISA5-201ENST00000296444 NECAB2Q7Z6G3 386 aa24.88■■□□□ 1.57
SHISA5-201ENST00000296444 ANKMY2Q8IV38 441 aa24.88■■□□□ 1.57
SHISA5-201ENST00000296444 ACTR5Q9H9F9 607 aaPredicted RBP24.88■■□□□ 1.57
SHISA5-201ENST00000296444 TMBIM4Q9HC24 238 aa24.88■■□□□ 1.57
SHISA5-201ENST00000296444 CEP290O15078 2479 aa24.88■■□□□ 1.57
SHISA5-201ENST00000296444 IRAK2O43187 625 aa24.87■■□□□ 1.57
SHISA5-201ENST00000296444 VSTM1Q6UX27 236 aa24.87■■□□□ 1.57
SHISA5-201ENST00000296444 DENND5BQ6ZUT9 1274 aa24.87■■□□□ 1.57
SHISA5-201ENST00000296444 C14orf80Q86SX3 495 aa24.87■■□□□ 1.57
SHISA5-201ENST00000296444 OLFM3Q96PB7 478 aa24.87■■□□□ 1.57
SHISA5-201ENST00000296444 SAYSD1Q9NPB0 183 aa24.87■■□□□ 1.57
SHISA5-201ENST00000296444 ABCC13Q9NSE7 274 aa24.87■■□□□ 1.57
SHISA5-201ENST00000296444 NEU3Q9UQ49 428 aa24.87■■□□□ 1.57
SHISA5-201ENST00000296444 SCML2Q9UQR0 700 aa24.87■■□□□ 1.57
SHISA5-201ENST00000296444 FAM107AO95990 144 aa24.87■■□□□ 1.57
SHISA5-201ENST00000296444 PSMD5Q16401 504 aa24.87■■□□□ 1.57
SHISA5-201ENST00000296444 PREPLQ4J6C6 727 aaPredicted RBP24.87■■□□□ 1.57
SHISA5-201ENST00000296444 MFSD5Q6N075 450 aa24.87■■□□□ 1.57
SHISA5-201ENST00000296444 NLRP14Q86W24 1093 aa24.87■■□□□ 1.57
SHISA5-201ENST00000296444 IGDCC3Q8IVU1 814 aa24.87■■□□□ 1.57
SHISA5-201ENST00000296444 SCML4Q8N228 414 aa24.87■■□□□ 1.57
SHISA5-201ENST00000296444 ZCCHC9Q8N567 271 aaKnown RBP24.87■■□□□ 1.57
SHISA5-201ENST00000296444 ARFGAP2Q8N6H7 521 aa24.87■■□□□ 1.57
SHISA5-201ENST00000296444 GIMAP7Q8NHV1 300 aa24.87■■□□□ 1.57
SHISA5-201ENST00000296444 CELF6Q96J87 481 aaKnown RBP24.87■■□□□ 1.57
SHISA5-201ENST00000296444 CTNNAL1Q9UBT7 734 aa24.87■■□□□ 1.57
SHISA5-201ENST00000296444 PTPRSQ13332 1948 aa24.87■■□□□ 1.57
SHISA5-201ENST00000296444 PARNO95453 639 aaKnown RBP24.86■■□□□ 1.57
SHISA5-201ENST00000296444 HAPLN1P10915 354 aaPredicted RBP24.86■■□□□ 1.57
SHISA5-201ENST00000296444 MDH1P40925 334 aaKnown RBP24.86■■□□□ 1.57
SHISA5-201ENST00000296444 ATP1A2P50993 1020 aa24.86■■□□□ 1.57
SHISA5-201ENST00000296444 SCAPQ12770 1279 aa24.86■■□□□ 1.57
SHISA5-201ENST00000296444 BTG3Q14201 252 aaPredicted RBP24.86■■□□□ 1.57
SHISA5-201ENST00000296444 LONRF1Q17RB8 773 aa24.86■■□□□ 1.57
SHISA5-201ENST00000296444 ANKS3Q6ZW76 656 aa24.86■■□□□ 1.57
SHISA5-201ENST00000296444 SPRED2Q7Z698 418 aa24.86■■□□□ 1.57
SHISA5-201ENST00000296444 NTAN1Q96AB6 310 aa24.86■■□□□ 1.57
SHISA5-201ENST00000296444 ATP6V1G3Q96LB4 118 aa24.86■■□□□ 1.57
SHISA5-201ENST00000296444 PRDM12Q9H4Q4 367 aa24.86■■□□□ 1.57
SHISA5-201ENST00000296444 CCSER2Q9H7U1 834 aa24.86■■□□□ 1.57
SHISA5-201ENST00000296444 KLC4Q9NSK0 619 aa24.86■■□□□ 1.57
SHISA5-201ENST00000296444 KIAA0355O15063 1070 aa24.86■■□□□ 1.57
SHISA5-201ENST00000296444 RASSF9O75901 435 aa24.86■■□□□ 1.57
SHISA5-201ENST00000296444 SPATA31D3P0C874 917 aa24.86■■□□□ 1.57
SHISA5-201ENST00000296444 GRIA1P42261 906 aa24.86■■□□□ 1.57
SHISA5-201ENST00000296444 USP41Q3LFD5 358 aa24.86■■□□□ 1.57
SHISA5-201ENST00000296444 DENND2CQ68D51 928 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms