RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 AP4E1Q9UPM8 1137 aa15.7■□□□□ 0.1
CCDC140-201ENST00000295226 SH3BP1Q9Y3L3 701 aa15.7■□□□□ 0.1
CCDC140-201ENST00000295226 PCDHA3Q9Y5H8 950 aa15.7■□□□□ 0.1
CCDC140-201ENST00000295226 HELZP42694 1942 aaKnown RBP15.69■□□□□ 0.1
CCDC140-201ENST00000295226 DENND4AQ7Z401 1863 aa15.69■□□□□ 0.1
CCDC140-201ENST00000295226 CXCR5P32302 372 aa15.69■□□□□ 0.1
CCDC140-201ENST00000295226 CTNNA1P35221 906 aaKnown RBP15.69■□□□□ 0.1
CCDC140-201ENST00000295226 ZNF211Q13398 564 aaPredicted RBP15.69■□□□□ 0.1
CCDC140-201ENST00000295226 RPS6KA1Q15418 735 aa15.69■□□□□ 0.1
CCDC140-201ENST00000295226 BOLA3Q53S33 107 aa15.69■□□□□ 0.1
CCDC140-201ENST00000295226 PARM1Q6UWI2 310 aa15.69■□□□□ 0.1
CCDC140-201ENST00000295226 ANKS1BQ7Z6G8 1248 aa15.69■□□□□ 0.1
CCDC140-201ENST00000295226 GPR161Q8N6U8 529 aaKnown RBP15.69■□□□□ 0.1
CCDC140-201ENST00000295226 RNF25Q96BH1 459 aaPredicted RBP15.69■□□□□ 0.1
CCDC140-201ENST00000295226 KCTD15Q96SI1 283 aaPredicted RBP15.69■□□□□ 0.1
CCDC140-201ENST00000295226 RPP25Q9BUL9 199 aaKnown RBP15.69■□□□□ 0.1
CCDC140-201ENST00000295226 PLA2G2FQ9BZM2 168 aa15.69■□□□□ 0.1
CCDC140-201ENST00000295226 JRKLQ9Y4A0 524 aa15.69■□□□□ 0.1
CCDC140-201ENST00000295226 HS3ST4Q9Y661 456 aa15.69■□□□□ 0.1
CCDC140-201ENST00000295226 SOBPA7XYQ1 873 aa15.68■□□□□ 0.1
CCDC140-201ENST00000295226 PSTPIP1O43586 416 aa15.68■□□□□ 0.1
CCDC140-201ENST00000295226 KRT1P04264 644 aa15.68■□□□□ 0.1
CCDC140-201ENST00000295226 SLC2A3P11169 496 aa15.68■□□□□ 0.1
CCDC140-201ENST00000295226 FCARP24071 287 aa15.68■□□□□ 0.1
CCDC140-201ENST00000295226 CTNNA2P26232 953 aa15.68■□□□□ 0.1
CCDC140-201ENST00000295226 L1CAMP32004 1257 aa15.68■□□□□ 0.1
CCDC140-201ENST00000295226 VCPP55072 806 aaKnown RBP15.68■□□□□ 0.1
CCDC140-201ENST00000295226 MMRN1Q13201 1228 aa15.68■□□□□ 0.1
CCDC140-201ENST00000295226 ZNF77Q15935 545 aa15.68■□□□□ 0.1
CCDC140-201ENST00000295226 ERCC6LQ2NKX8 1250 aa15.68■□□□□ 0.1
CCDC140-201ENST00000295226 ARL13BQ3SXY8 428 aa15.68■□□□□ 0.1
CCDC140-201ENST00000295226 LEXMQ3ZCV2 418 aa15.68■□□□□ 0.1
CCDC140-201ENST00000295226 PPP6R3Q5H9R7 873 aaPredicted RBP15.68■□□□□ 0.1
CCDC140-201ENST00000295226 DCAF12L1Q5VU92 463 aa15.68■□□□□ 0.1
CCDC140-201ENST00000295226 RAP1GAP2Q684P5 730 aa15.68■□□□□ 0.1
CCDC140-201ENST00000295226 NUGGCQ68CJ6 796 aa15.68■□□□□ 0.1
CCDC140-201ENST00000295226 RFWD3Q6PCD5 774 aa15.68■□□□□ 0.1
CCDC140-201ENST00000295226 UNC45BQ8IWX7 931 aa15.68■□□□□ 0.1
CCDC140-201ENST00000295226 BBS7Q8IWZ6 715 aa15.68■□□□□ 0.1
CCDC140-201ENST00000295226 ATP6V0D2Q8N8Y2 350 aa15.68■□□□□ 0.1
CCDC140-201ENST00000295226 KCTD6Q8NC69 237 aa15.68■□□□□ 0.1
CCDC140-201ENST00000295226 NTAN1Q96AB6 310 aa15.68■□□□□ 0.1
CCDC140-201ENST00000295226 RPGRIP1Q96KN7 1286 aa15.68■□□□□ 0.1
CCDC140-201ENST00000295226 BTN2A3PQ96KV6 586 aa15.68■□□□□ 0.1
CCDC140-201ENST00000295226 NCAPGQ9BPX3 1015 aa15.68■□□□□ 0.1
CCDC140-201ENST00000295226 KXD1Q9BQD3 176 aa15.68■□□□□ 0.1
CCDC140-201ENST00000295226 LINC00597Q9H2U6 94 aa15.68■□□□□ 0.1
CCDC140-201ENST00000295226 SLC12A6Q9UHW9 1150 aa15.68■□□□□ 0.1
CCDC140-201ENST00000295226 HEPACAM2A8MVW5 462 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 CREB3O43889 395 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 ACSL4O60488 711 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 TSPAN3O60637 253 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 SRGAP2O75044 1071 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 TUBBP07437 444 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 KRT7P08729 469 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 PYGMP11217 842 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 H2AFXP16104 143 aaPredicted RBP15.67■□□□□ 0.1
CCDC140-201ENST00000295226 SLC6A4P31645 630 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 CDH6P55285 790 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 MS4A13Q5J8X5 152 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 EFHC2Q5JST6 749 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 LRRC38Q5VT99 294 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 PTCRAQ6ISU1 281 aaPredicted RBP15.67■□□□□ 0.1
CCDC140-201ENST00000295226 Q6ZNB5 142 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 CELF5Q8N6W0 485 aaKnown RBP15.67■□□□□ 0.1
CCDC140-201ENST00000295226 FGF14Q92915 247 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 ZFYVE19Q96K21 471 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 OR12D3Q9UGF7 316 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 ZMYM5Q9UJ78 669 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 MYOFQ9NZM1 2061 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 NUP210Q8TEM1 1887 aaPredicted RBP15.67■□□□□ 0.1
CCDC140-201ENST00000295226 CCDC66A2RUB6 948 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 LRRD1A4D1F6 860 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 C2CD4DB7Z1M9 353 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 KCNK3O14649 394 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 IL9P15248 144 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 SLC11A2P49281 568 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 IRAK1P51617 712 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 ARSEP51690 589 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 MLLT6P55198 1093 aaPredicted RBP15.67■□□□□ 0.1
CCDC140-201ENST00000295226 SCAPQ12770 1279 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 USP4Q13107 963 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 KRT81Q14533 505 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 NAA30Q147X3 362 aaPredicted RBP15.67■□□□□ 0.1
CCDC140-201ENST00000295226 FAM133BQ5BKY9 247 aaKnown RBP15.67■□□□□ 0.1
CCDC140-201ENST00000295226 ARTNQ5T4W7 220 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 MFSD7Q6UXD7 560 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 HTR3DQ70Z44 454 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 POLNQ7Z5Q5 900 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 UBL4BQ8N7F7 174 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 TEKT4Q8WW24 435 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 RSAD2Q8WXG1 361 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 P2RY11Q96G91 374 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 HAPLN3Q96S86 360 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 PCDH18Q9HCL0 1135 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 ZFP14Q9HCL3 533 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 LSM7Q9UK45 103 aaKnown RBP15.67■□□□□ 0.1
CCDC140-201ENST00000295226 VANGL2Q9ULK5 521 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 WNT6Q9Y6F9 365 aa15.67■□□□□ 0.1
CCDC140-201ENST00000295226 C3orf70A6NLC5 250 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms