RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 CCDC14Q49A88 953 aa15.13■□□□□ 0.01
CCNF-201ENST00000293968 ANKRD20A4Q4UJ75 823 aa15.13■□□□□ 0.01
CCNF-201ENST00000293968 PACS1Q6VY07 963 aa15.13■□□□□ 0.01
CCNF-201ENST00000293968 NCAPG2Q86XI2 1143 aa15.13■□□□□ 0.01
CCNF-201ENST00000293968 DNAAF3Q8N9W5 541 aa15.13■□□□□ 0.01
CCNF-201ENST00000293968 RAB3IL1Q8TBN0 382 aa15.13■□□□□ 0.01
CCNF-201ENST00000293968 SREK1Q8WXA9 508 aaKnown RBP15.13■□□□□ 0.01
CCNF-201ENST00000293968 SCYL1Q96KG9 808 aa15.13■□□□□ 0.01
CCNF-201ENST00000293968 WDR55Q9H6Y2 383 aaPredicted RBP15.13■□□□□ 0.01
CCNF-201ENST00000293968 NRDE2Q9H7Z3 1164 aa15.13■□□□□ 0.01
CCNF-201ENST00000293968 MFHAS1Q9Y4C4 1052 aa15.13■□□□□ 0.01
CCNF-201ENST00000293968 GJA3Q9Y6H8 435 aa15.13■□□□□ 0.01
CCNF-201ENST00000293968 RPS6KL1Q9Y6S9 549 aa15.13■□□□□ 0.01
CCNF-201ENST00000293968 IL1BP01584 269 aa15.13■□□□□ 0.01
CCNF-201ENST00000293968 GRIA2P42262 883 aa15.13■□□□□ 0.01
CCNF-201ENST00000293968 PHKA2P46019 1235 aa15.13■□□□□ 0.01
CCNF-201ENST00000293968 ABCE1P61221 599 aaKnown RBP15.13■□□□□ 0.01
CCNF-201ENST00000293968 FAM91A1Q658Y4 838 aa15.13■□□□□ 0.01
CCNF-201ENST00000293968 RNF111Q6ZNA4 994 aa15.13■□□□□ 0.01
CCNF-201ENST00000293968 JADE3Q92613 823 aa15.13■□□□□ 0.01
CCNF-201ENST00000293968 FAM149B1Q96BN6 582 aa15.13■□□□□ 0.01
CCNF-201ENST00000293968 MCRS1Q96EZ8 462 aa15.13■□□□□ 0.01
CCNF-201ENST00000293968 PRPF18Q99633 342 aaKnown RBP15.13■□□□□ 0.01
CCNF-201ENST00000293968 COG4Q9H9E3 785 aa15.13■□□□□ 0.01
CCNF-201ENST00000293968 HESX1Q9UBX0 185 aa15.13■□□□□ 0.01
CCNF-201ENST00000293968 AFG3L2Q9Y4W6 797 aa15.13■□□□□ 0.01
CCNF-201ENST00000293968 QSER1Q2KHR3 1735 aa15.12■□□□□ 0.01
CCNF-201ENST00000293968 FAM159BA6NKW6 160 aa15.12■□□□□ 0.01
CCNF-201ENST00000293968 MAP1SQ66K74 1059 aaPredicted RBP15.12■□□□□ 0.01
CCNF-201ENST00000293968 SAMD7Q7Z3H4 446 aa15.12■□□□□ 0.01
CCNF-201ENST00000293968 SNX32Q86XE0 403 aa15.12■□□□□ 0.01
CCNF-201ENST00000293968 FBXW8Q8N3Y1 598 aa15.12■□□□□ 0.01
CCNF-201ENST00000293968 CNKSR2Q8WXI2 1034 aa15.12■□□□□ 0.01
CCNF-201ENST00000293968 CPB2Q96IY4 423 aa15.12■□□□□ 0.01
CCNF-201ENST00000293968 CDRT15Q96T59 188 aa15.12■□□□□ 0.01
CCNF-201ENST00000293968 UNKQ9C0B0 810 aaKnown RBP15.12■□□□□ 0.01
CCNF-201ENST00000293968 CAB39LQ9H9S4 337 aa15.12■□□□□ 0.01
CCNF-201ENST00000293968 DCDC2Q9UHG0 476 aa15.12■□□□□ 0.01
CCNF-201ENST00000293968 SSX2IPQ9Y2D8 614 aa15.12■□□□□ 0.01
CCNF-201ENST00000293968 ANKRD33BA6NCL7 494 aa15.12■□□□□ 0.01
CCNF-201ENST00000293968 ALDOAP04075 364 aaKnown RBP15.12■□□□□ 0.01
CCNF-201ENST00000293968 ITGA2BP08514 1039 aa15.12■□□□□ 0.01
CCNF-201ENST00000293968 TFE3P19532 575 aaPredicted RBP15.12■□□□□ 0.01
CCNF-201ENST00000293968 GARSP41250 739 aaKnown RBP15.12■□□□□ 0.01
CCNF-201ENST00000293968 TMED1Q13445 227 aa15.12■□□□□ 0.01
CCNF-201ENST00000293968 TNFAIP1Q13829 316 aa15.12■□□□□ 0.01
CCNF-201ENST00000293968 ZNF280CQ8ND82 737 aa15.12■□□□□ 0.01
CCNF-201ENST00000293968 TFB1MQ8WVM0 346 aaKnown RBP15.12■□□□□ 0.01
CCNF-201ENST00000293968 AZIN2Q96A70 460 aa15.12■□□□□ 0.01
CCNF-201ENST00000293968 DTNBP1Q96EV8 351 aa15.12■□□□□ 0.01
CCNF-201ENST00000293968 TMA16Q96EY4 203 aaKnown RBP15.12■□□□□ 0.01
CCNF-201ENST00000293968 C1orf21Q9H246 121 aa15.12■□□□□ 0.01
CCNF-201ENST00000293968 PLAC1Q9HBJ0 212 aa15.12■□□□□ 0.01
CCNF-201ENST00000293968 RBBP6Q7Z6E9 1792 aaKnown RBP15.12■□□□□ 0.01
CCNF-201ENST00000293968 VDRP11473 427 aa15.12■□□□□ 0.01
CCNF-201ENST00000293968 OLIG2Q13516 323 aa15.12■□□□□ 0.01
CCNF-201ENST00000293968 TAZQ16635 292 aa15.12■□□□□ 0.01
CCNF-201ENST00000293968 RARS2Q5T160 578 aaKnown RBP15.12■□□□□ 0.01
CCNF-201ENST00000293968 ZNF781Q8N8C0 355 aa15.12■□□□□ 0.01
CCNF-201ENST00000293968 COLGALT1Q8NBJ5 622 aa15.12■□□□□ 0.01
CCNF-201ENST00000293968 DNAJB4Q9UDY4 337 aa15.12■□□□□ 0.01
CCNF-201ENST00000293968 SIX4Q9UIU6 781 aa15.12■□□□□ 0.01
CCNF-201ENST00000293968 SORCS3Q9UPU3 1222 aa15.12■□□□□ 0.01
CCNF-201ENST00000293968 GOLGA8TH3BQL2 631 aa15.11■□□□□ 0.01
CCNF-201ENST00000293968 STAG3L1P0CL83 205 aa15.11■□□□□ 0.01
CCNF-201ENST00000293968 ADORA2BP29275 332 aa15.11■□□□□ 0.01
CCNF-201ENST00000293968 PCLAFQ15004 111 aa15.11■□□□□ 0.01
CCNF-201ENST00000293968 IER5Q5VY09 327 aa15.11■□□□□ 0.01
CCNF-201ENST00000293968 RTKN2Q8IZC4 609 aa15.11■□□□□ 0.01
CCNF-201ENST00000293968 DCUN1D1Q96GG9 259 aa15.11■□□□□ 0.01
CCNF-201ENST00000293968 LENG8Q96PV6 779 aaPredicted RBP15.11■□□□□ 0.01
CCNF-201ENST00000293968 ITGA11Q9UKX5 1188 aa15.11■□□□□ 0.01
CCNF-201ENST00000293968 ATP9BO43861 1147 aa15.11■□□□□ 0.01
CCNF-201ENST00000293968 CILPO75339 1184 aa15.11■□□□□ 0.01
CCNF-201ENST00000293968 SRGAP2BP0DMP2 458 aa15.11■□□□□ 0.01
CCNF-201ENST00000293968 NELFEP18615 380 aaKnown RBP15.11■□□□□ 0.01
CCNF-201ENST00000293968 CXCL9Q07325 125 aa15.11■□□□□ 0.01
CCNF-201ENST00000293968 ART3Q13508 389 aa15.11■□□□□ 0.01
CCNF-201ENST00000293968 SLC9B1Q4ZJI4 515 aa15.11■□□□□ 0.01
CCNF-201ENST00000293968 PPM1LQ5SGD2 360 aa15.11■□□□□ 0.01
CCNF-201ENST00000293968 FBXL19Q6PCT2 694 aa15.11■□□□□ 0.01
CCNF-201ENST00000293968 LRRC39Q96DD0 335 aa15.11■□□□□ 0.01
CCNF-201ENST00000293968 LPIN3Q9BQK8 851 aa15.11■□□□□ 0.01
CCNF-201ENST00000293968 LZTS1Q9Y250 596 aa15.11■□□□□ 0.01
CCNF-201ENST00000293968 FDFT1P37268 417 aa15.11■□□□□ 0.01
CCNF-201ENST00000293968 GLRBP48167 497 aa15.11■□□□□ 0.01
CCNF-201ENST00000293968 ACAP1Q15027 740 aa15.11■□□□□ 0.01
CCNF-201ENST00000293968 STILQ15468 1287 aa15.11■□□□□ 0.01
CCNF-201ENST00000293968 MAVSQ7Z434 540 aa15.11■□□□□ 0.01
CCNF-201ENST00000293968 PTAR1Q7Z6K3 402 aaPredicted RBP15.11■□□□□ 0.01
CCNF-201ENST00000293968 TDRD5Q8NAT2 981 aaKnown RBP15.11■□□□□ 0.01
CCNF-201ENST00000293968 ZNF669Q96BR6 464 aaPredicted RBP15.11■□□□□ 0.01
CCNF-201ENST00000293968 GCOM2Q9BZD3 368 aaPredicted RBP15.11■□□□□ 0.01
CCNF-201ENST00000293968 CDT1Q9H211 546 aa15.11■□□□□ 0.01
CCNF-201ENST00000293968 ZNF214Q9UL59 606 aaPredicted RBP15.11■□□□□ 0.01
CCNF-201ENST00000293968 PLSCR1O15162 318 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 PEX1O43933 1283 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 MAFO75444 373 aaPredicted RBP15.1■□□□□ 0.01
CCNF-201ENST00000293968 AMHP03971 560 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 IL4RP24394 825 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms