RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 STON1Q9Y6Q2 735 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 ZC3H11AO75152 810 aaKnown RBP eCLIP16.49■□□□□ 0.23
SSRP1-202ENST00000293880 ELK3P41970 407 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 SCNN1BP51168 640 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 MYL6P60660 151 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 GIT2Q14161 759 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 TKFCQ3LXA3 575 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 ARHGAP15Q53QZ3 475 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 C16orf46Q6P387 395 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 SLC30A10Q6XR72 485 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 PPP2R3CQ969Q6 453 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 SLITRK1Q96PX8 696 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 DPY30Q9C005 99 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 DCLK3Q9C098 648 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 ZNF222Q9UK12 451 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 SLC12A8A0AV02 714 aa16.48■□□□□ 0.23
SSRP1-202ENST00000293880 ARF4P18085 180 aaPredicted RBP16.48■□□□□ 0.23
SSRP1-202ENST00000293880 KLHL12Q53G59 568 aa16.48■□□□□ 0.23
SSRP1-202ENST00000293880 CAMKK2Q96RR4 588 aa16.48■□□□□ 0.23
SSRP1-202ENST00000293880 RGS18Q9NS28 235 aa16.48■□□□□ 0.23
SSRP1-202ENST00000293880 PRMT7Q9NVM4 692 aaPredicted RBP16.48■□□□□ 0.23
SSRP1-202ENST00000293880 LOC100506127A0A0U1RQW1 187 aa16.48■□□□□ 0.23
SSRP1-202ENST00000293880 SEC22BO75396 215 aa16.48■□□□□ 0.23
SSRP1-202ENST00000293880 RARGP13631 454 aa16.48■□□□□ 0.23
SSRP1-202ENST00000293880 RHOAP61586 193 aa16.48■□□□□ 0.23
SSRP1-202ENST00000293880 MPP3Q13368 585 aa16.48■□□□□ 0.23
SSRP1-202ENST00000293880 DOK6Q6PKX4 331 aa16.48■□□□□ 0.23
SSRP1-202ENST00000293880 C16orf59Q7L2K0 433 aa16.48■□□□□ 0.23
SSRP1-202ENST00000293880 GGA3Q9NZ52 723 aa16.48■□□□□ 0.23
SSRP1-202ENST00000293880 H2AFXP16104 143 aaPredicted RBP16.48■□□□□ 0.23
SSRP1-202ENST00000293880 ERCC2P18074 760 aa16.48■□□□□ 0.23
SSRP1-202ENST00000293880 DNAJB2P25686 324 aa16.48■□□□□ 0.23
SSRP1-202ENST00000293880 STIP1P31948 543 aaKnown RBP16.48■□□□□ 0.23
SSRP1-202ENST00000293880 TIGD7Q6NT04 549 aaPredicted RBP16.48■□□□□ 0.23
SSRP1-202ENST00000293880 RXFP2Q8WXD0 754 aa16.48■□□□□ 0.23
SSRP1-202ENST00000293880 KDM6AO15550 1401 aaPredicted RBP16.48■□□□□ 0.23
SSRP1-202ENST00000293880 EFCAB10A6NFE3 127 aa16.48■□□□□ 0.23
SSRP1-202ENST00000293880 CES2O00748 559 aa16.48■□□□□ 0.23
SSRP1-202ENST00000293880 FMO4P31512 558 aa16.48■□□□□ 0.23
SSRP1-202ENST00000293880 DCTN2Q13561 401 aaKnown RBP16.48■□□□□ 0.23
SSRP1-202ENST00000293880 GSTA3Q16772 222 aa16.48■□□□□ 0.23
SSRP1-202ENST00000293880 KCNMB4Q86W47 210 aa16.48■□□□□ 0.23
SSRP1-202ENST00000293880 SNX32Q86XE0 403 aa16.48■□□□□ 0.23
SSRP1-202ENST00000293880 FAM45AQ8TCE6 357 aa16.48■□□□□ 0.23
SSRP1-202ENST00000293880 VPS33AQ96AX1 596 aa16.48■□□□□ 0.23
SSRP1-202ENST00000293880 CCDC126Q96EE4 140 aa16.48■□□□□ 0.23
SSRP1-202ENST00000293880 PLA2R1Q13018 1463 aa16.48■□□□□ 0.23
SSRP1-202ENST00000293880 FAM220BPB1ANY3 271 aa16.48■□□□□ 0.23
SSRP1-202ENST00000293880 TSPAN19P0C672 248 aa16.48■□□□□ 0.23
SSRP1-202ENST00000293880 NT5C2P49902 561 aa16.48■□□□□ 0.23
SSRP1-202ENST00000293880 DET1Q7L5Y6 550 aa16.48■□□□□ 0.23
SSRP1-202ENST00000293880 LINC00116Q8NCU8 138 aa16.48■□□□□ 0.23
SSRP1-202ENST00000293880 SLC5A5Q92911 643 aa16.48■□□□□ 0.23
SSRP1-202ENST00000293880 CDRT15Q96T59 188 aa16.48■□□□□ 0.23
SSRP1-202ENST00000293880 APBA2Q99767 749 aa16.48■□□□□ 0.23
SSRP1-202ENST00000293880 LACRTQ9GZZ8 138 aa16.48■□□□□ 0.23
SSRP1-202ENST00000293880 EHD3Q9NZN3 535 aa16.48■□□□□ 0.23
SSRP1-202ENST00000293880 SPATA31A1Q5TZJ5 1347 aa16.47■□□□□ 0.23
SSRP1-202ENST00000293880 ALDH5A1P51649 535 aaPredicted RBP16.47■□□□□ 0.23
SSRP1-202ENST00000293880 EIF2B5Q13144 721 aaKnown RBP16.47■□□□□ 0.23
SSRP1-202ENST00000293880 PDK2Q15119 407 aa16.47■□□□□ 0.23
SSRP1-202ENST00000293880 PCDH20Q8N6Y1 951 aaKnown RBP16.47■□□□□ 0.23
SSRP1-202ENST00000293880 FBXO28Q9NVF7 368 aa16.47■□□□□ 0.23
SSRP1-202ENST00000293880 NINJ2Q9NZG7 142 aa16.47■□□□□ 0.23
SSRP1-202ENST00000293880 A0A1W2PRG6 482 aa16.47■□□□□ 0.23
SSRP1-202ENST00000293880 RHOCP08134 193 aa16.47■□□□□ 0.23
SSRP1-202ENST00000293880 TNNI3P19429 210 aa16.47■□□□□ 0.23
SSRP1-202ENST00000293880 MRPS22P82650 360 aaKnown RBP16.47■□□□□ 0.23
SSRP1-202ENST00000293880 SNAPC2Q13487 334 aa16.47■□□□□ 0.23
SSRP1-202ENST00000293880 WDR93Q6P2C0 686 aa16.47■□□□□ 0.23
SSRP1-202ENST00000293880 STK32CQ86UX6 486 aa16.47■□□□□ 0.23
SSRP1-202ENST00000293880 RSPH1Q8WYR4 309 aa16.47■□□□□ 0.23
SSRP1-202ENST00000293880 CROTQ9UKG9 612 aa16.47■□□□□ 0.23
SSRP1-202ENST00000293880 R3HDM2Q9Y2K5 976 aaKnown RBP16.47■□□□□ 0.23
SSRP1-202ENST00000293880 A0A0U1RQJ8 604 aa16.47■□□□□ 0.23
SSRP1-202ENST00000293880 MOXD2PA6NHM9 499 aa16.47■□□□□ 0.23
SSRP1-202ENST00000293880 NPY2RP49146 381 aa16.47■□□□□ 0.23
SSRP1-202ENST00000293880 SBK1Q52WX2 424 aa16.47■□□□□ 0.23
SSRP1-202ENST00000293880 RNASE11Q8TAA1 199 aaKnown RBP16.47■□□□□ 0.23
SSRP1-202ENST00000293880 C2CD2Q9Y426 696 aa16.47■□□□□ 0.23
SSRP1-202ENST00000293880 MTSS1O43312 755 aa16.47■□□□□ 0.23
SSRP1-202ENST00000293880 IDH3BO43837 385 aa16.47■□□□□ 0.23
SSRP1-202ENST00000293880 GRIN3BO60391 1043 aa16.47■□□□□ 0.23
SSRP1-202ENST00000293880 MICAL2O94851 1124 aa16.47■□□□□ 0.23
SSRP1-202ENST00000293880 ACAT1P24752 427 aaKnown RBP16.47■□□□□ 0.23
SSRP1-202ENST00000293880 NPTX2P47972 431 aa16.47■□□□□ 0.23
SSRP1-202ENST00000293880 TOB1P50616 345 aaPredicted RBP16.47■□□□□ 0.23
SSRP1-202ENST00000293880 ZIK1Q3SY52 487 aaPredicted RBP16.47■□□□□ 0.23
SSRP1-202ENST00000293880 TRMT11Q7Z4G4 463 aaKnown RBP16.47■□□□□ 0.23
SSRP1-202ENST00000293880 ENGASEQ8NFI3 743 aa16.47■□□□□ 0.23
SSRP1-202ENST00000293880 ABCG8Q9H221 673 aa16.47■□□□□ 0.23
SSRP1-202ENST00000293880 EURLQ9NYK6 297 aa16.47■□□□□ 0.23
SSRP1-202ENST00000293880 ARHGAP20Q9P2F6 1191 aa16.47■□□□□ 0.23
SSRP1-202ENST00000293880 MYL12BO14950 172 aa16.47■□□□□ 0.23
SSRP1-202ENST00000293880 CLOCKO15516 846 aa16.47■□□□□ 0.23
SSRP1-202ENST00000293880 SLC41A1Q8IVJ1 513 aa16.47■□□□□ 0.23
SSRP1-202ENST00000293880 FBXO30Q8TB52 745 aa16.47■□□□□ 0.23
SSRP1-202ENST00000293880 TAS1R2Q8TE23 839 aa16.47■□□□□ 0.23
SSRP1-202ENST00000293880 NDUFAF1Q9Y375 327 aa16.47■□□□□ 0.23
SSRP1-202ENST00000293880 C1orf167Q5SNV9 1468 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms