RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 ITM2CQ9NQX7 267 aa26.27■■□□□ 1.8
U2AF1-201ENST00000291552 ABCB8Q9NUT2 735 aa26.27■■□□□ 1.8
U2AF1-201ENST00000291552 CYTH4Q9UIA0 394 aa26.27■■□□□ 1.8
U2AF1-201ENST00000291552 WASF3Q9UPY6 502 aa26.27■■□□□ 1.8
U2AF1-201ENST00000291552 FBXO21O94952 628 aa26.26■■□□□ 1.79
U2AF1-201ENST00000291552 EPHX1P07099 455 aa26.26■■□□□ 1.79
U2AF1-201ENST00000291552 PIK3R6Q5UE93 754 aa26.26■■□□□ 1.79
U2AF1-201ENST00000291552 CACUL1Q86Y37 369 aa26.26■■□□□ 1.79
U2AF1-201ENST00000291552 DQX1Q8TE96 717 aaKnown RBP26.26■■□□□ 1.79
U2AF1-201ENST00000291552 WFIKKN2Q8TEU8 576 aa26.26■■□□□ 1.79
U2AF1-201ENST00000291552 FCRL2Q96LA5 508 aaPredicted RBP26.26■■□□□ 1.79
U2AF1-201ENST00000291552 PRICKLE1Q96MT3 831 aaPredicted RBP26.26■■□□□ 1.79
U2AF1-201ENST00000291552 ACP6Q9NPH0 428 aa26.26■■□□□ 1.79
U2AF1-201ENST00000291552 GGA2Q9UJY4 613 aa26.26■■□□□ 1.79
U2AF1-201ENST00000291552 SYNCRIPO60506 623 aaKnown RBP26.25■■□□□ 1.79
U2AF1-201ENST00000291552 NDUFS2O75306 463 aa26.25■■□□□ 1.79
U2AF1-201ENST00000291552 CEACAM1P13688 526 aa26.25■■□□□ 1.79
U2AF1-201ENST00000291552 TPMTP51580 245 aa26.25■■□□□ 1.79
U2AF1-201ENST00000291552 TBX4P57082 545 aa26.25■■□□□ 1.79
U2AF1-201ENST00000291552 RING1Q06587 406 aa26.25■■□□□ 1.79
U2AF1-201ENST00000291552 PTPRNQ16849 979 aa26.25■■□□□ 1.79
U2AF1-201ENST00000291552 GJB7Q6PEY0 223 aa26.25■■□□□ 1.79
U2AF1-201ENST00000291552 SERPINA13PQ6UXR4 307 aa26.25■■□□□ 1.79
U2AF1-201ENST00000291552 CHST9Q7L1S5 443 aa26.25■■□□□ 1.79
U2AF1-201ENST00000291552 PIP4P1Q86T03 277 aa26.25■■□□□ 1.79
U2AF1-201ENST00000291552 ZNF366Q8N895 744 aa26.25■■□□□ 1.79
U2AF1-201ENST00000291552 SIPA1Q96FS4 1042 aa26.25■■□□□ 1.79
U2AF1-201ENST00000291552 LMLNQ96KR4 655 aa26.25■■□□□ 1.79
U2AF1-201ENST00000291552 GTPBP2Q9BX10 602 aaKnown RBP26.25■■□□□ 1.79
U2AF1-201ENST00000291552 TMEM245Q9H330 911 aa26.25■■□□□ 1.79
U2AF1-201ENST00000291552 TIMM44O43615 452 aa26.24■■□□□ 1.79
U2AF1-201ENST00000291552 ACSL4O60488 711 aa26.24■■□□□ 1.79
U2AF1-201ENST00000291552 KRT37O76014 449 aa26.24■■□□□ 1.79
U2AF1-201ENST00000291552 IGLV3-19P01714 112 aa26.24■■□□□ 1.79
U2AF1-201ENST00000291552 PABPC1P11940 636 aaKnown RBP26.24■■□□□ 1.79
U2AF1-201ENST00000291552 KRT5P13647 590 aa26.24■■□□□ 1.79
U2AF1-201ENST00000291552 MAOBP27338 520 aa26.24■■□□□ 1.79
U2AF1-201ENST00000291552 CD70P32970 193 aa26.24■■□□□ 1.79
U2AF1-201ENST00000291552 APBA1Q02410 837 aa26.24■■□□□ 1.79
U2AF1-201ENST00000291552 GFPT1Q06210 699 aaPredicted RBP26.24■■□□□ 1.79
U2AF1-201ENST00000291552 SEMA3BQ13214 749 aa26.24■■□□□ 1.79
U2AF1-201ENST00000291552 CAMK2GQ13555 558 aaPredicted RBP26.24■■□□□ 1.79
U2AF1-201ENST00000291552 NUGGCQ68CJ6 796 aa26.24■■□□□ 1.79
U2AF1-201ENST00000291552 RABEPKQ7Z6M1 372 aa26.24■■□□□ 1.79
U2AF1-201ENST00000291552 SCUBE3Q8IX30 993 aa26.24■■□□□ 1.79
U2AF1-201ENST00000291552 MINDY1Q8N5J2 469 aa26.24■■□□□ 1.79
U2AF1-201ENST00000291552 CRACR2AQ9BSW2 395 aa26.24■■□□□ 1.79
U2AF1-201ENST00000291552 GPR174Q9BXC1 333 aa26.24■■□□□ 1.79
U2AF1-201ENST00000291552 UBE2TQ9NPD8 197 aaPredicted RBP26.24■■□□□ 1.79
U2AF1-201ENST00000291552 KIAA1468Q9P260 1216 aa26.24■■□□□ 1.79
U2AF1-201ENST00000291552 ARHGAP33O14559 1287 aa26.23■■□□□ 1.79
U2AF1-201ENST00000291552 TBL1XO60907 577 aa26.23■■□□□ 1.79
U2AF1-201ENST00000291552 TOP3BO95985 862 aaKnown RBP26.23■■□□□ 1.79
U2AF1-201ENST00000291552 TAC4Q86UU9 113 aa26.23■■□□□ 1.79
U2AF1-201ENST00000291552 FOXJ1Q92949 421 aa26.23■■□□□ 1.79
U2AF1-201ENST00000291552 SLC39A13Q96H72 371 aa26.23■■□□□ 1.79
U2AF1-201ENST00000291552 SLC4A5Q9BY07 1137 aa26.23■■□□□ 1.79
U2AF1-201ENST00000291552 RWDD2AQ9UIY3 292 aa26.23■■□□□ 1.79
U2AF1-201ENST00000291552 NAALADL1Q9UQQ1 740 aa26.23■■□□□ 1.79
U2AF1-201ENST00000291552 BECN2A8MW95 431 aa26.22■■□□□ 1.79
U2AF1-201ENST00000291552 C7P10643 843 aa26.22■■□□□ 1.79
U2AF1-201ENST00000291552 CAMK4Q16566 473 aa26.22■■□□□ 1.79
U2AF1-201ENST00000291552 MEA1Q16626 185 aa26.22■■□□□ 1.79
U2AF1-201ENST00000291552 ST3GAL2Q16842 350 aa26.22■■□□□ 1.79
U2AF1-201ENST00000291552 FNDC3BQ53EP0 1204 aaKnown RBP26.22■■□□□ 1.79
U2AF1-201ENST00000291552 MPP7Q5T2T1 576 aa26.22■■□□□ 1.79
U2AF1-201ENST00000291552 MBLAC2Q68D91 279 aa26.22■■□□□ 1.79
U2AF1-201ENST00000291552 TRIM65Q6PJ69 517 aa26.22■■□□□ 1.79
U2AF1-201ENST00000291552 IRF2BP1Q8IU81 584 aa26.22■■□□□ 1.79
U2AF1-201ENST00000291552 UNC45BQ8IWX7 931 aa26.22■■□□□ 1.79
U2AF1-201ENST00000291552 RGL4Q8IZJ4 473 aa26.22■■□□□ 1.79
U2AF1-201ENST00000291552 AHI1Q8N157 1196 aa26.22■■□□□ 1.79
U2AF1-201ENST00000291552 OR2T3Q8NH03 318 aa26.22■■□□□ 1.79
U2AF1-201ENST00000291552 ADAM32Q8TC27 787 aa26.22■■□□□ 1.79
U2AF1-201ENST00000291552 DNASE2BQ8WZ79 361 aa26.22■■□□□ 1.79
U2AF1-201ENST00000291552 PRCCQ92733 491 aaPredicted RBP26.22■■□□□ 1.79
U2AF1-201ENST00000291552 GOLGA1Q92805 767 aa26.22■■□□□ 1.79
U2AF1-201ENST00000291552 AZIN2Q96A70 460 aa26.22■■□□□ 1.79
U2AF1-201ENST00000291552 IRX2Q9BZI1 471 aaPredicted RBP26.22■■□□□ 1.79
U2AF1-201ENST00000291552 ST7Q9NRC1 585 aa26.22■■□□□ 1.79
U2AF1-201ENST00000291552 TJP2Q9UDY2 1190 aa26.22■■□□□ 1.79
U2AF1-201ENST00000291552 TP53BP1Q12888 1972 aaPredicted RBP26.21■■□□□ 1.79
U2AF1-201ENST00000291552 UPK3BL1B0FP48 263 aa26.21■■□□□ 1.79
U2AF1-201ENST00000291552 UPK3BL2E5RIL1 263 aa26.21■■□□□ 1.79
U2AF1-201ENST00000291552 PAPSS1O43252 624 aaPredicted RBP26.21■■□□□ 1.79
U2AF1-201ENST00000291552 LETM1O95202 739 aaPredicted RBP26.21■■□□□ 1.79
U2AF1-201ENST00000291552 SLC9A1P19634 815 aa26.21■■□□□ 1.79
U2AF1-201ENST00000291552 SLC11A2P49281 568 aa26.21■■□□□ 1.79
U2AF1-201ENST00000291552 ARID5AQ03989 594 aa26.21■■□□□ 1.79
U2AF1-201ENST00000291552 FOXC1Q12948 553 aa26.21■■□□□ 1.79
U2AF1-201ENST00000291552 NNTQ13423 1086 aa26.21■■□□□ 1.79
U2AF1-201ENST00000291552 E2F5Q15329 346 aa26.21■■□□□ 1.79
U2AF1-201ENST00000291552 SYPL2Q5VXT5 272 aa26.21■■□□□ 1.79
U2AF1-201ENST00000291552 STK32AQ8WU08 396 aa26.21■■□□□ 1.79
U2AF1-201ENST00000291552 ZNF606Q8WXB4 792 aa26.21■■□□□ 1.79
U2AF1-201ENST00000291552 FAM149B1Q96BN6 582 aa26.21■■□□□ 1.79
U2AF1-201ENST00000291552 NUCKS1Q9H1E3 243 aaKnown RBP26.21■■□□□ 1.79
U2AF1-201ENST00000291552 XPO7Q9UIA9 1087 aaKnown RBP26.21■■□□□ 1.79
U2AF1-201ENST00000291552 TLR6Q9Y2C9 796 aa26.21■■□□□ 1.79
U2AF1-201ENST00000291552 TMEM131Q92545 1883 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms