RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 TRPM4Q8TD43 1214 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 LZICQ8WZA0 190 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 PTPRN2Q92932 1015 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 ULK4Q96C45 1275 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 APOPT1Q96IL0 206 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 GPR88Q9GZN0 384 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 CDY2AQ9Y6F7 541 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 CDY1Q9Y6F8 540 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 MYPNQ86TC9 1320 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 UBA6A0AVT1 1052 aaPredicted RBP12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 MYO1GB0I1T2 1018 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 JCHAINP01591 159 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 CAPN1P07384 714 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 UNGP13051 313 aaPredicted RBP12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 FOXN2P32314 431 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 HSPA13P48723 471 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 XRCC4Q13426 336 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 PDK2Q15119 407 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 IMPG1Q17R60 797 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 ITPRIPL1Q6GPH6 555 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 LMO3Q8TAP4 145 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 GLMNQ92990 594 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 OXNAD1Q96HP4 312 aaPredicted RBP12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 TCRBV9S1A1TA0A576 114 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 GAS2O43903 313 aaKnown RBP12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 LRCH4O75427 683 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 ZNF23P17027 643 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 PAMP19021 973 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 GDF10P55107 478 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 GAD2Q05329 585 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 BTBD8Q5XKL5 378 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 MFSD5Q6N075 450 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 VSTM1Q6UX27 236 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 SZRD1Q7Z422 152 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 STRA8Q7Z7C7 330 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 BBS5Q8N3I7 341 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 GPRC5AQ8NFJ5 357 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 SLC2A14Q8TDB8 520 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 ALOX15BO15296 676 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 KRT36O76013 467 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 ERBB2P04626 1255 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 NFKBIAP25963 317 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 ADCYAP1R1P41586 468 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 ADIGQ0VDE8 80 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 NEDD8Q15843 81 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 RSBN1Q5VWQ0 802 aaPredicted RBP12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 NOTUMQ6P988 496 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 USP13Q92995 863 aaPredicted RBP12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 ELMO2Q96JJ3 720 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 CYP4F12Q9HCS2 524 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 SYBUQ9NX95 663 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 TAGLN3Q9UI15 199 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 NR2E3Q9Y5X4 410 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 MYH11P35749 1972 aa12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 TAF4O00268 1085 aa12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 ZMPSTE24O75844 475 aa12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 VNN1O95497 513 aa12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 PLIN5Q00G26 463 aa12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 BBS12Q6ZW61 710 aa12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 SNRNP25Q9BV90 132 aaKnown RBP12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 ATXN3LQ9H3M9 355 aa12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 ACSS2Q9NR19 701 aa12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 HACD3Q9P035 362 aa12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 ZNF536O15090 1300 aa12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 TJP1Q07157 1748 aa12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 PKD1L3Q7Z443 1732 aa12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 DOT1LQ8TEK3 1739 aa12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 BCL10O95999 233 aa12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 ERVK-10P10266 1014 aa12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 TGFB3P10600 412 aa12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 HMOX2P30519 316 aa12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 TAF6P49848 677 aa12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 BST1Q10588 318 aa12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 ITGADQ13349 1161 aa12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 PDAP1Q13442 181 aaKnown RBP12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 LBRQ14739 615 aaKnown RBP12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 SH3PXD2AQ5TCZ1 1133 aa12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 TSHZ1Q6ZSZ6 1077 aa12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 P3H2Q8IVL5 708 aa12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 ZC3H15Q8WU90 426 aaKnown RBP12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 PARVBQ9HBI1 364 aa12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 IARS2Q9NSE4 1012 aaKnown RBP12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 STARD13Q9Y3M8 1113 aa12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 LZTS3O60299 673 aaPredicted RBP12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 EDF1O60869 148 aaKnown RBP12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 RGS2P41220 211 aa12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 ALYREFQ86V81 257 aaKnown RBP12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 DEFB106AQ8N104 65 aa12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 L3MBTL3Q96JM7 780 aaPredicted RBP12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 RERGLQ9H628 205 aa12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 DRG1Q9Y295 367 aaKnown RBP12.86□□□□□ -0.35
SLC6A1-201ENST00000287766 MAFO75444 373 aaPredicted RBP12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 SRP72O76094 671 aaKnown RBP12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 TRUB2O95900 331 aaKnown RBP12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 ITGAVP06756 1048 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 HSPA1AP0DMV8 641 aaKnown RBP12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 HSPA1BP0DMV9 641 aaKnown RBP12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 CPT1BQ92523 772 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 FIZ1Q96SL8 496 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms