RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 CXCL12P48061 93 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 NUMBP49757 651 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 CCR3P51677 355 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 SGSHP51688 502 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 ZNF75DP51815 510 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 ATXN1P54253 815 aaKnown RBP6.77□□□□□ -1.33
CD44-204ENST00000279452 PTPN5P54829 565 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 SATB1Q01826 763 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 GFPT1Q06210 699 aaPredicted RBP6.77□□□□□ -1.33
CD44-204ENST00000279452 CCINQ13939 588 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 C15orf59Q2T9L4 293 aaPredicted RBP6.77□□□□□ -1.33
CD44-204ENST00000279452 GAB4Q2WGN9 574 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 ARL13BQ3SXY8 428 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 SLC25A52Q3SY17 297 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 FBXO43Q4G163 708 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 MS4A13Q5J8X5 152 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 RABGAP1LQ5R372 815 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 CCDC122Q5T0U0 273 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 FYB2Q5VWT5 728 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 HEATR6Q6AI08 1181 aaKnown RBP6.77□□□□□ -1.33
CD44-204ENST00000279452 NADSYN1Q6IA69 706 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 SDE2Q6IQ49 451 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 ANKS1BQ7Z6G8 1248 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 CIR1Q86X95 450 aaPredicted RBP6.77□□□□□ -1.33
CD44-204ENST00000279452 C1orf210Q8IVY1 113 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 SFTPA1Q8IWL2 248 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 CHPFQ8IZ52 775 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 SYNPOQ8N3V7 929 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 CCDC33Q8N5R6 958 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 ALLCQ8N6M5 410 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 TERB1Q8NA31 727 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 PRSS33Q8NF86 280 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 CCDC26Q8TAB7 109 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 FAM172AQ8WUF8 416 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 ACDQ96AP0 544 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 CLDN23Q96B33 292 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 SLC39A13Q96H72 371 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 PRICKLE1Q96MT3 831 aaPredicted RBP6.77□□□□□ -1.33
CD44-204ENST00000279452 NPY6RQ99463 290 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 CHRDQ9H2X0 955 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 PARVAQ9NVD7 372 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 FAM86C1Q9NVL1 165 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 MARK1Q9P0L2 795 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 TMEM59LQ9UK28 342 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 VANGL2Q9ULK5 521 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 SCINQ9Y6U3 715 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 ANAPC1Q9H1A4 1944 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 VCANP13611 3396 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 A0A087X0T9 212 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 C2CD4BA6NLJ0 364 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 SIGLEC16A6NMB1 481 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 ZBTB24O43167 697 aaPredicted RBP6.76□□□□□ -1.33
CD44-204ENST00000279452 CCP110O43303 1012 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 SRGAP2O75044 1071 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 ADCY5O95622 1261 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 PENKP01210 267 aaPredicted RBP6.76□□□□□ -1.33
CD44-204ENST00000279452 IGLV3-25P01717 112 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 FAM228BP0C875 321 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 MYBL1P10243 752 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 HOXD9P28356 352 aaPredicted RBP6.76□□□□□ -1.33
CD44-204ENST00000279452 SSR1P43307 286 aaKnown RBP6.76□□□□□ -1.33
CD44-204ENST00000279452 NUBP1P53384 320 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 RPL7AP62424 266 aaKnown RBP6.76□□□□□ -1.33
CD44-204ENST00000279452 RPS24P62847 133 aaKnown RBP6.76□□□□□ -1.33
CD44-204ENST00000279452 MESP2Q0VG99 397 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 PTP4A2Q12974 167 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 MTA1Q13330 715 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 CCDC14Q49A88 953 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 FAM133BQ5BKY9 247 aaKnown RBP6.76□□□□□ -1.33
CD44-204ENST00000279452 BRMS1LQ5PSV4 323 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 SH3PXD2AQ5TCZ1 1133 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 EMC10Q5UCC4 262 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 PIK3R6Q5UE93 754 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 OTUD1Q5VV17 481 aaPredicted RBP6.76□□□□□ -1.33
CD44-204ENST00000279452 HGSNATQ68CP4 663 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 TRNP1Q6NT89 227 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 PKN3Q6P5Z2 889 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 ALKBH5Q6P6C2 394 aaKnown RBP6.76□□□□□ -1.33
CD44-204ENST00000279452 WDR59Q6PJI9 974 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 LRRC31Q6UY01 552 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 CHST9Q7L1S5 443 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 TRMT11Q7Z4G4 463 aaKnown RBP6.76□□□□□ -1.33
CD44-204ENST00000279452 ETFBKMTQ8IXQ9 262 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 FAM217AQ8IXS0 508 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 PGBD3Q8N328 593 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 SPEM1Q8N4L4 309 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 ZNF513Q8N8E2 541 aaPredicted RBP6.76□□□□□ -1.33
CD44-204ENST00000279452 ZNF557Q8N988 423 aaPredicted RBP6.76□□□□□ -1.33
CD44-204ENST00000279452 SPC24Q8NBT2 197 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 TSTD1Q8NFU3 115 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 UCMAQ8WVF2 138 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 CTNNBL1Q8WYA6 563 aaPredicted RBP6.76□□□□□ -1.33
CD44-204ENST00000279452 EZH1Q92800 747 aaPredicted RBP6.76□□□□□ -1.33
CD44-204ENST00000279452 CCDC42Q96M95 316 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 HHIPQ96QV1 700 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 DNAJC7Q99615 494 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 SYT11Q9BT88 431 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 IER2Q9BTL4 223 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 MRPL47Q9HD33 250 aaKnown RBP6.76□□□□□ -1.33
CD44-204ENST00000279452 TMPRSS4Q9NRS4 437 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms