RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 PWP2Q15269 919 aaKnown RBP14.73□□□□□ -0.05
TMEM47-201ENST00000275954 SLC1A5Q15758 541 aa14.73□□□□□ -0.05
TMEM47-201ENST00000275954 UGP2Q16851 508 aa14.73□□□□□ -0.05
TMEM47-201ENST00000275954 ANO4Q32M45 955 aa14.73□□□□□ -0.05
TMEM47-201ENST00000275954 PDZD8Q8NEN9 1154 aa14.73□□□□□ -0.05
TMEM47-201ENST00000275954 TMEM169Q96HH4 297 aa14.73□□□□□ -0.05
TMEM47-201ENST00000275954 TKTL2Q9H0I9 626 aa14.73□□□□□ -0.05
TMEM47-201ENST00000275954 FAM96AQ9H5X1 160 aa14.73□□□□□ -0.05
TMEM47-201ENST00000275954 IL1RL2Q9HB29 575 aa14.73□□□□□ -0.05
TMEM47-201ENST00000275954 AFF4Q9UHB7 1163 aaKnown RBP14.73□□□□□ -0.05
TMEM47-201ENST00000275954 PPME1Q9Y570 386 aa14.73□□□□□ -0.05
TMEM47-201ENST00000275954 GRIN2DO15399 1336 aa14.73□□□□□ -0.05
TMEM47-201ENST00000275954 DNM1LO00429 736 aa14.72□□□□□ -0.05
TMEM47-201ENST00000275954 CASQ2O14958 399 aaPredicted RBP14.72□□□□□ -0.05
TMEM47-201ENST00000275954 GLRA3O75311 464 aa14.72□□□□□ -0.05
TMEM47-201ENST00000275954 CILPO75339 1184 aa14.72□□□□□ -0.05
TMEM47-201ENST00000275954 ACCSLQ4AC99 568 aa14.72□□□□□ -0.05
TMEM47-201ENST00000275954 TEX9Q8N6V9 391 aa14.72□□□□□ -0.05
TMEM47-201ENST00000275954 DNAJC9Q8WXX5 260 aa14.72□□□□□ -0.05
TMEM47-201ENST00000275954 CPT1BQ92523 772 aa14.72□□□□□ -0.05
TMEM47-201ENST00000275954 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.72□□□□□ -0.05
TMEM47-201ENST00000275954 CATSPERBQ9H7T0 1116 aa14.72□□□□□ -0.05
TMEM47-201ENST00000275954 F5P12259 2224 aa14.72□□□□□ -0.05
TMEM47-201ENST00000275954 PRRG1O14668 218 aa14.72□□□□□ -0.05
TMEM47-201ENST00000275954 TM9SF1O15321 606 aa14.72□□□□□ -0.05
TMEM47-201ENST00000275954 NVLO15381 856 aaKnown RBP14.72□□□□□ -0.05
TMEM47-201ENST00000275954 SNX2O60749 519 aa14.72□□□□□ -0.05
TMEM47-201ENST00000275954 CPA3P15088 417 aa14.72□□□□□ -0.05
TMEM47-201ENST00000275954 MGAT5Q09328 741 aa14.72□□□□□ -0.05
TMEM47-201ENST00000275954 ANKRD20A2Q5SQ80 823 aa14.72□□□□□ -0.05
TMEM47-201ENST00000275954 TMCO4Q5TGY1 634 aa14.72□□□□□ -0.05
TMEM47-201ENST00000275954 ANKRD20A1Q5TYW2 823 aa14.72□□□□□ -0.05
TMEM47-201ENST00000275954 B3GALNT2Q8NCR0 500 aa14.72□□□□□ -0.05
TMEM47-201ENST00000275954 APOPT1Q96IL0 206 aa14.72□□□□□ -0.05
TMEM47-201ENST00000275954 FICDQ9BVA6 458 aa14.72□□□□□ -0.05
TMEM47-201ENST00000275954 PDZD7Q9H5P4 517 aa14.72□□□□□ -0.05
TMEM47-201ENST00000275954 ANLNQ9NQW6 1124 aa14.72□□□□□ -0.05
TMEM47-201ENST00000275954 RUVBL2Q9Y230 463 aaKnown RBP14.72□□□□□ -0.05
TMEM47-201ENST00000275954 C2CD2Q9Y426 696 aa14.72□□□□□ -0.05
TMEM47-201ENST00000275954 MARF1Q9Y4F3 1742 aaKnown RBP14.72□□□□□ -0.05
TMEM47-201ENST00000275954 VAPBO95292 243 aa14.72□□□□□ -0.05
TMEM47-201ENST00000275954 SPATA31D3P0C874 917 aa14.72□□□□□ -0.05
TMEM47-201ENST00000275954 IGFBP4P22692 258 aa14.72□□□□□ -0.05
TMEM47-201ENST00000275954 ELF3P78545 371 aaPredicted RBP14.72□□□□□ -0.05
TMEM47-201ENST00000275954 ACAP1Q15027 740 aa14.72□□□□□ -0.05
TMEM47-201ENST00000275954 FNBP1LQ5T0N5 605 aa14.72□□□□□ -0.05
TMEM47-201ENST00000275954 CAPRIN2Q6IMN6 1127 aaKnown RBP14.72□□□□□ -0.05
TMEM47-201ENST00000275954 C4orf22Q6V702 233 aa14.72□□□□□ -0.05
TMEM47-201ENST00000275954 SPATA31D4Q6ZUB0 917 aa14.72□□□□□ -0.05
TMEM47-201ENST00000275954 EFHD1Q9BUP0 239 aa14.72□□□□□ -0.05
TMEM47-201ENST00000275954 PCDH18Q9HCL0 1135 aa14.72□□□□□ -0.05
TMEM47-201ENST00000275954 NT5MQ9NPB1 228 aa14.72□□□□□ -0.05
TMEM47-201ENST00000275954 FBXO6Q9NRD1 293 aaPredicted RBP14.72□□□□□ -0.05
TMEM47-201ENST00000275954 GPR182O15218 404 aa14.71□□□□□ -0.05
TMEM47-201ENST00000275954 PHGDHO43175 533 aaKnown RBP14.71□□□□□ -0.05
TMEM47-201ENST00000275954 CHEK2O96017 543 aa14.71□□□□□ -0.05
TMEM47-201ENST00000275954 F9P00740 461 aa14.71□□□□□ -0.05
TMEM47-201ENST00000275954 ATP4AP20648 1035 aa14.71□□□□□ -0.05
TMEM47-201ENST00000275954 CYP2C18P33260 490 aa14.71□□□□□ -0.05
TMEM47-201ENST00000275954 SLC45A4Q5BKX6 768 aa14.71□□□□□ -0.05
TMEM47-201ENST00000275954 TAS1R3Q7RTX0 852 aa14.71□□□□□ -0.05
TMEM47-201ENST00000275954 TMEM130Q8N3G9 435 aa14.71□□□□□ -0.05
TMEM47-201ENST00000275954 RNF148Q8N7C7 305 aa14.71□□□□□ -0.05
TMEM47-201ENST00000275954 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.71□□□□□ -0.05
TMEM47-201ENST00000275954 ACSS3Q9H6R3 686 aa14.71□□□□□ -0.05
TMEM47-201ENST00000275954 HACD3Q9P035 362 aa14.71□□□□□ -0.05
TMEM47-201ENST00000275954 ST3GAL5Q9UNP4 418 aa14.71□□□□□ -0.05
TMEM47-201ENST00000275954 C2orf71A6NGG8 1288 aa14.71□□□□□ -0.05
TMEM47-201ENST00000275954 MMP3P08254 477 aa14.71□□□□□ -0.05
TMEM47-201ENST00000275954 HADHBP55084 474 aaKnown RBP14.71□□□□□ -0.05
TMEM47-201ENST00000275954 WNT7BP56706 349 aa14.71□□□□□ -0.05
TMEM47-201ENST00000275954 TWF1Q12792 350 aa14.71□□□□□ -0.05
TMEM47-201ENST00000275954 LRRC43Q8N309 656 aa14.71□□□□□ -0.05
TMEM47-201ENST00000275954 ANKRD52Q8NB46 1076 aa14.71□□□□□ -0.05
TMEM47-201ENST00000275954 UPF3AQ9H1J1 476 aaKnown RBP14.71□□□□□ -0.05
TMEM47-201ENST00000275954 IGFLR1Q9H665 355 aa14.71□□□□□ -0.05
TMEM47-201ENST00000275954 NDFIP2Q9NV92 336 aa14.71□□□□□ -0.05
TMEM47-201ENST00000275954 TULP2O00295 520 aa14.71□□□□□ -0.05
TMEM47-201ENST00000275954 MTSS1O43312 755 aa14.71□□□□□ -0.05
TMEM47-201ENST00000275954 MTA2O94776 668 aa14.71□□□□□ -0.05
TMEM47-201ENST00000275954 LTFP02788 710 aa14.71□□□□□ -0.05
TMEM47-201ENST00000275954 HOXC6P09630 235 aa14.71□□□□□ -0.05
TMEM47-201ENST00000275954 IL1R2P27930 398 aa14.71□□□□□ -0.05
TMEM47-201ENST00000275954 LHX1P48742 406 aa14.71□□□□□ -0.05
TMEM47-201ENST00000275954 PLK1P53350 603 aa14.71□□□□□ -0.05
TMEM47-201ENST00000275954 BTG3Q14201 252 aaPredicted RBP14.71□□□□□ -0.05
TMEM47-201ENST00000275954 LDLRAD1Q5T700 205 aa14.71□□□□□ -0.05
TMEM47-201ENST00000275954 FRA10AC1Q70Z53 315 aa14.71□□□□□ -0.05
TMEM47-201ENST00000275954 RBM23Q86U06 439 aaKnown RBP14.71□□□□□ -0.05
TMEM47-201ENST00000275954 NAT9Q9BTE0 207 aa14.71□□□□□ -0.05
TMEM47-201ENST00000275954 TRIM4Q9C037 500 aa14.71□□□□□ -0.05
TMEM47-201ENST00000275954 DPEP3Q9H4B8 488 aa14.71□□□□□ -0.05
TMEM47-201ENST00000275954 ZNF112Q9UJU3 913 aa14.71□□□□□ -0.05
TMEM47-201ENST00000275954 NRCAMQ92823 1304 aa14.71□□□□□ -0.05
TMEM47-201ENST00000275954 MEI4A8MW99 385 aa14.71□□□□□ -0.06
TMEM47-201ENST00000275954 UBTFL6P0CB48 400 aaPredicted RBP14.71□□□□□ -0.06
TMEM47-201ENST00000275954 OGDHQ02218 1023 aa14.71□□□□□ -0.06
TMEM47-201ENST00000275954 MBTD1Q05BQ5 628 aa14.71□□□□□ -0.06
TMEM47-201ENST00000275954 TMEM259Q4ZIN3 620 aa14.71□□□□□ -0.06
TMEM47-201ENST00000275954 PTAR1Q7Z6K3 402 aaPredicted RBP14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms