RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 TTLL4Q14679 1199 aa16.11■□□□□ 0.17
UBR3-201ENST00000272793 INTS6LQ5JSJ4 861 aaKnown RBP16.11■□□□□ 0.17
UBR3-201ENST00000272793 ZIM3Q96PE6 472 aa16.11■□□□□ 0.17
UBR3-201ENST00000272793 ALDH8A1Q9H2A2 487 aaPredicted RBP16.11■□□□□ 0.17
UBR3-201ENST00000272793 AHSPQ9NZD4 102 aa16.11■□□□□ 0.17
UBR3-201ENST00000272793 AKAP7Q9P0M2 348 aaPredicted RBP16.11■□□□□ 0.17
UBR3-201ENST00000272793 YEATS2Q9ULM3 1422 aa16.11■□□□□ 0.17
UBR3-201ENST00000272793 RBP3P10745 1247 aa16.11■□□□□ 0.17
UBR3-201ENST00000272793 SLC2A4P14672 509 aa16.11■□□□□ 0.17
UBR3-201ENST00000272793 MAN2A2P49641 1150 aa16.11■□□□□ 0.17
UBR3-201ENST00000272793 ZNF621Q6ZSS3 439 aa16.11■□□□□ 0.17
UBR3-201ENST00000272793 STK32CQ86UX6 486 aa16.11■□□□□ 0.17
UBR3-201ENST00000272793 ZZZ3Q8IYH5 903 aa16.11■□□□□ 0.17
UBR3-201ENST00000272793 INTS2Q9H0H0 1204 aaKnown RBP16.11■□□□□ 0.17
UBR3-201ENST00000272793 CRNNQ9UBG3 495 aaPredicted RBP16.11■□□□□ 0.17
UBR3-201ENST00000272793 MYRFQ9Y2G1 1151 aa16.11■□□□□ 0.17
UBR3-201ENST00000272793 LRG1P02750 347 aa16.11■□□□□ 0.17
UBR3-201ENST00000272793 SRCP12931 536 aa16.11■□□□□ 0.17
UBR3-201ENST00000272793 IRAK1P51617 712 aa16.11■□□□□ 0.17
UBR3-201ENST00000272793 PDIA6Q15084 440 aa16.11■□□□□ 0.17
UBR3-201ENST00000272793 TBC1D25Q3MII6 688 aa16.11■□□□□ 0.17
UBR3-201ENST00000272793 TNFAIP8L1Q8WVP5 186 aa16.11■□□□□ 0.17
UBR3-201ENST00000272793 RPRD1AQ96P16 312 aaPredicted RBP16.11■□□□□ 0.17
UBR3-201ENST00000272793 FICDQ9BVA6 458 aa16.11■□□□□ 0.17
UBR3-201ENST00000272793 POLR3FQ9H1D9 316 aaPredicted RBP16.11■□□□□ 0.17
UBR3-201ENST00000272793 CPVLQ9H3G5 476 aa16.11■□□□□ 0.17
UBR3-201ENST00000272793 TOR3AQ9H497 397 aa16.11■□□□□ 0.17
UBR3-201ENST00000272793 PSMD9O00233 223 aa16.11■□□□□ 0.17
UBR3-201ENST00000272793 PGRMC2O15173 223 aa16.11■□□□□ 0.17
UBR3-201ENST00000272793 CORO7P57737 925 aa16.11■□□□□ 0.17
UBR3-201ENST00000272793 ARHGEF19Q8IW93 802 aa16.11■□□□□ 0.17
UBR3-201ENST00000272793 RNF145Q96MT1 663 aa16.11■□□□□ 0.17
UBR3-201ENST00000272793 MMP19Q99542 508 aa16.11■□□□□ 0.17
UBR3-201ENST00000272793 PHB2Q99623 299 aa16.11■□□□□ 0.17
UBR3-201ENST00000272793 ETAA1Q9NY74 926 aa16.11■□□□□ 0.17
UBR3-201ENST00000272793 INVSQ9Y283 1065 aa16.11■□□□□ 0.17
UBR3-201ENST00000272793 WDR19Q8NEZ3 1342 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 CDC25CP30307 473 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 MNDAP41218 407 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 SETD9Q8NE22 299 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 ZNF669Q96BR6 464 aaPredicted RBP16.1■□□□□ 0.17
UBR3-201ENST00000272793 DBNDD1Q9H9R9 158 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 ARHGAP28Q9P2N2 729 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 CROTQ9UKG9 612 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 H3BM21 787 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 SASH1O94885 1247 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 PI16Q6UXB8 463 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 TMEM68Q96MH6 324 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 VPS33BQ9H267 617 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 DCLRE1BQ9H816 532 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 VPS4AQ9UN37 437 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 CDH3P22223 829 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 MEA1Q16626 185 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 MFSD14CQ5VZR4 134 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 TTC39CQ8N584 583 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 ATL1Q8WXF7 558 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 ENTPD4Q9Y227 616 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 RP1P56715 2156 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 PNMA6FA0A0J9YX94 578 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 FOXN3O00409 490 aaPredicted RBP16.1■□□□□ 0.17
UBR3-201ENST00000272793 SNRNP48Q6IEG0 339 aaKnown RBP16.1■□□□□ 0.17
UBR3-201ENST00000272793 SLC25A25Q6KCM7 469 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 PRR23CQ6ZRP0 262 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 ZNF280BQ86YH2 543 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 FNDC5Q8NAU1 212 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 SSH3Q8TE77 659 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 HEXDCQ8WVB3 486 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 SGSM3Q96HU1 749 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 FAM111AQ96PZ2 611 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 CNPPD1Q9BV87 410 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 GRXCR2A6NFK2 248 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 SEC24AO95486 1093 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 NR3C2P08235 984 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 ATP2C1P98194 919 aaPredicted RBP16.1■□□□□ 0.17
UBR3-201ENST00000272793 DEF8Q6ZN54 512 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 ZNF560Q96MR9 790 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 TMEM120AQ9BXJ8 343 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 AGO2Q9UKV8 859 aaKnown RBP16.1■□□□□ 0.17
UBR3-201ENST00000272793 DCLK1O15075 740 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 ENDOD1O94919 500 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 ANXA6P08133 673 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 SLC1A1P43005 524 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 ZFP69Q49AA0 526 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 GPAT3Q53EU6 434 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 TRMT11Q7Z4G4 463 aaKnown RBP16.1■□□□□ 0.17
UBR3-201ENST00000272793 HIPK1Q86Z02 1210 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 FAM167AQ96KS9 214 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 SNX12Q9UMY4 172 aa16.1■□□□□ 0.17
UBR3-201ENST00000272793 NQO1P15559 274 aaKnown RBP16.09■□□□□ 0.17
UBR3-201ENST00000272793 ECHS1P30084 290 aa16.09■□□□□ 0.17
UBR3-201ENST00000272793 PTGER2P43116 358 aa16.09■□□□□ 0.17
UBR3-201ENST00000272793 RP9Q8TA86 221 aaKnown RBP16.09■□□□□ 0.17
UBR3-201ENST00000272793 KLHL5Q96PQ7 755 aa16.09■□□□□ 0.17
UBR3-201ENST00000272793 FARP2O94887 1054 aaPredicted RBP16.09■□□□□ 0.17
UBR3-201ENST00000272793 PIK3C3Q8NEB9 887 aa16.09■□□□□ 0.17
UBR3-201ENST00000272793 RFFLQ8WZ73 363 aa16.09■□□□□ 0.17
UBR3-201ENST00000272793 CHCHD6Q9BRQ6 235 aa16.09■□□□□ 0.17
UBR3-201ENST00000272793 TMEM117Q9H0C3 514 aa16.09■□□□□ 0.17
UBR3-201ENST00000272793 PMF1-BGLAPU3KQ54 211 aa16.09■□□□□ 0.17
UBR3-201ENST00000272793 PFASO15067 1338 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms