RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 TMPRSS6Q8IU80 811 aa9.37□□□□□ -0.91
TPM3-201ENST00000271850 CPXM2Q8N436 756 aa9.37□□□□□ -0.91
TPM3-201ENST00000271850 ZCCHC9Q8N567 271 aaKnown RBP9.37□□□□□ -0.91
TPM3-201ENST00000271850 ZNF366Q8N895 744 aa9.37□□□□□ -0.91
TPM3-201ENST00000271850 PNPLA1Q8N8W4 532 aa9.37□□□□□ -0.91
TPM3-201ENST00000271850 BAHD1Q8TBE0 780 aaPredicted RBP9.37□□□□□ -0.91
TPM3-201ENST00000271850 ZCCHC14Q8WYQ9 949 aaKnown RBP9.37□□□□□ -0.91
TPM3-201ENST00000271850 ERCC4Q92889 916 aaPredicted RBP9.37□□□□□ -0.91
TPM3-201ENST00000271850 LMLNQ96KR4 655 aa9.37□□□□□ -0.91
TPM3-201ENST00000271850 SPATA32Q96LK8 384 aa9.37□□□□□ -0.91
TPM3-201ENST00000271850 HEXIM2Q96MH2 286 aaKnown RBP9.37□□□□□ -0.91
TPM3-201ENST00000271850 ORAI3Q9BRQ5 295 aa9.37□□□□□ -0.91
TPM3-201ENST00000271850 GPR174Q9BXC1 333 aa9.37□□□□□ -0.91
TPM3-201ENST00000271850 UBXN6Q9BZV1 441 aa9.37□□□□□ -0.91
TPM3-201ENST00000271850 TMEM245Q9H330 911 aa9.37□□□□□ -0.91
TPM3-201ENST00000271850 SLC32A1Q9H598 525 aa9.37□□□□□ -0.91
TPM3-201ENST00000271850 PRDM16Q9HAZ2 1276 aa9.37□□□□□ -0.91
TPM3-201ENST00000271850 RAB20Q9NX57 234 aa9.37□□□□□ -0.91
TPM3-201ENST00000271850 ELOVL2Q9NXB9 296 aa9.37□□□□□ -0.91
TPM3-201ENST00000271850 MARCH2Q9P0N8 246 aa9.37□□□□□ -0.91
TPM3-201ENST00000271850 SFMBT1Q9UHJ3 866 aa9.37□□□□□ -0.91
TPM3-201ENST00000271850 STOML2Q9UJZ1 356 aa9.37□□□□□ -0.91
TPM3-201ENST00000271850 FNDC3AQ9Y2H6 1198 aaKnown RBP9.37□□□□□ -0.91
TPM3-201ENST00000271850 COQ4Q9Y3A0 265 aa9.37□□□□□ -0.91
TPM3-201ENST00000271850 FASNP49327 2511 aaKnown RBP9.36□□□□□ -0.91
TPM3-201ENST00000271850 A0A1W2PQ27 194 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 A0A1W2PQ64 194 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 TRIM49BA6NDI0 452 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 YJEFN3A6XGL0 299 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 E7ENQ6 273 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 DKK1O94907 266 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 ZNF202O95125 648 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 KIF20AO95235 890 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 FTH1P19P0C7X4 201 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 RALAP11233 206 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 GTF2H1P32780 548 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 TKTL1P51854 596 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 RING1Q06587 406 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 GOLGA8FQ08AF8 430 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 GOLGA8DPQ0D2H9 430 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 PNOCQ13519 176 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 GOLGA7BQ2TAP0 167 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 EDRF1Q3B7T1 1238 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 PLEKHG6Q3KR16 790 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 KCNT1Q5JUK3 1230 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 DCAF12L1Q5VU92 463 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 ANKS1BQ7Z6G8 1248 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 KIAA0907Q7Z7F0 614 aaPredicted RBP9.36□□□□□ -0.91
TPM3-201ENST00000271850 ADIPOR2Q86V24 386 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 MARCH9Q86YJ5 346 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 FMNL3Q8IVF7 1028 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 NAXDQ8IW45 347 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 RGL4Q8IZJ4 473 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 ANKRD52Q8NB46 1076 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 FBXL13Q8NEE6 735 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 CLEC4CQ8WTT0 213 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 CYB5D2Q8WUJ1 264 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 TFAP2BQ92481 460 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 EDEM1Q92611 657 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 KAT5Q92993 513 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 MYO19Q96H55 970 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 IMPG2Q9BZV3 1241 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 MTG2Q9H4K7 406 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 C6orf106Q9H6K1 298 aaPredicted RBP9.36□□□□□ -0.91
TPM3-201ENST00000271850 TSPAN16Q9UKR8 245 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 PCOLCE2Q9UKZ9 415 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 FCF1Q9Y324 198 aaKnown RBP9.36□□□□□ -0.91
TPM3-201ENST00000271850 CABIN1Q9Y6J0 2220 aa9.36□□□□□ -0.91
TPM3-201ENST00000271850 PTPRBP23467 1997 aa9.35□□□□□ -0.91
TPM3-201ENST00000271850 GOLGA6L7A0A1B0GV03 622 aa9.35□□□□□ -0.91
TPM3-201ENST00000271850 TMEM8BA6NDV4 472 aa9.35□□□□□ -0.91
TPM3-201ENST00000271850 METTL12A8MUP2 240 aa9.35□□□□□ -0.91
TPM3-201ENST00000271850 C10orf142B7Z368 130 aa9.35□□□□□ -0.91
TPM3-201ENST00000271850 RNF225M0QZC1 329 aaPredicted RBP9.35□□□□□ -0.91
TPM3-201ENST00000271850 O00370 1275 aa9.35□□□□□ -0.91
TPM3-201ENST00000271850 XPO1O14980 1071 aaKnown RBP9.35□□□□□ -0.91
TPM3-201ENST00000271850 TSPAN3O60637 253 aa9.35□□□□□ -0.91
TPM3-201ENST00000271850 ZBED1O96006 694 aa9.35□□□□□ -0.91
TPM3-201ENST00000271850 KRT13P13646 458 aa9.35□□□□□ -0.91
TPM3-201ENST00000271850 SLC6A4P31645 630 aa9.35□□□□□ -0.91
TPM3-201ENST00000271850 ACSL1P33121 698 aa9.35□□□□□ -0.91
TPM3-201ENST00000271850 CHKAP35790 457 aa9.35□□□□□ -0.91
TPM3-201ENST00000271850 PRCPP42785 496 aa9.35□□□□□ -0.91
TPM3-201ENST00000271850 ATXN3P54252 364 aaPredicted RBP9.35□□□□□ -0.91
TPM3-201ENST00000271850 KRT85P78386 507 aa9.35□□□□□ -0.91
TPM3-201ENST00000271850 COG7P83436 770 aa9.35□□□□□ -0.91
TPM3-201ENST00000271850 ADIGQ0VDE8 80 aa9.35□□□□□ -0.91
TPM3-201ENST00000271850 CAMK2GQ13555 558 aaPredicted RBP9.35□□□□□ -0.91
TPM3-201ENST00000271850 CUL2Q13617 745 aa9.35□□□□□ -0.91
TPM3-201ENST00000271850 TRIP6Q15654 476 aaKnown RBP9.35□□□□□ -0.91
TPM3-201ENST00000271850 FAM133BQ5BKY9 247 aaKnown RBP9.35□□□□□ -0.91
TPM3-201ENST00000271850 NADSYN1Q6IA69 706 aa9.35□□□□□ -0.91
TPM3-201ENST00000271850 SDE2Q6IQ49 451 aa9.35□□□□□ -0.91
TPM3-201ENST00000271850 LAYNQ6UX15 382 aa9.35□□□□□ -0.91
TPM3-201ENST00000271850 IGSF10Q6WRI0 2623 aa9.35□□□□□ -0.91
TPM3-201ENST00000271850 DBX2Q6ZNG2 339 aa9.35□□□□□ -0.91
TPM3-201ENST00000271850 HDDC3Q8N4P3 179 aa9.35□□□□□ -0.91
TPM3-201ENST00000271850 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.35□□□□□ -0.91
TPM3-201ENST00000271850 UBA3Q8TBC4 463 aa9.35□□□□□ -0.91
TPM3-201ENST00000271850 ADAMTS14Q8WXS8 1223 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms