RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 TPI1P60174 286 aa15.8■□□□□ 0.12
SF3B4-201ENST00000271628 ITIH4Q14624 930 aa15.8■□□□□ 0.12
SF3B4-201ENST00000271628 ZNF280DQ6N043 979 aa15.8■□□□□ 0.12
SF3B4-201ENST00000271628 CTU1Q7Z7A3 348 aaKnown RBP15.8■□□□□ 0.12
SF3B4-201ENST00000271628 PIGWQ7Z7B1 504 aa15.8■□□□□ 0.12
SF3B4-201ENST00000271628 EXOC3L1Q86VI1 746 aa15.8■□□□□ 0.12
SF3B4-201ENST00000271628 SCN4BQ8IWT1 228 aa15.8■□□□□ 0.12
SF3B4-201ENST00000271628 DQX1Q8TE96 717 aaKnown RBP15.8■□□□□ 0.12
SF3B4-201ENST00000271628 C8orf48Q96LL4 319 aa15.8■□□□□ 0.12
SF3B4-201ENST00000271628 EPAS1Q99814 870 aa15.8■□□□□ 0.12
SF3B4-201ENST00000271628 OXCT2Q9BYC2 517 aaPredicted RBP15.8■□□□□ 0.12
SF3B4-201ENST00000271628 HIPK3Q9H422 1215 aa15.8■□□□□ 0.12
SF3B4-201ENST00000271628 FBXO44Q9H4M3 255 aa15.8■□□□□ 0.12
SF3B4-201ENST00000271628 TMPRSS4Q9NRS4 437 aa15.8■□□□□ 0.12
SF3B4-201ENST00000271628 DCLK1O15075 740 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 MYCP01106 439 aaPredicted RBP15.79■□□□□ 0.12
SF3B4-201ENST00000271628 IGLV3-25P01717 112 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 CXCL10P02778 98 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 MAGEA11P43364 429 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 GLUD2P49448 558 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 MNAT1P51948 309 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 SMARCB1Q12824 385 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 NR1H3Q13133 447 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 RASA2Q15283 850 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 BBS9Q3SYG4 887 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 CTXN3Q4LDR2 81 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 BRMS1LQ5PSV4 323 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 HP1BP3Q5SSJ5 553 aaPredicted RBP15.79■□□□□ 0.12
SF3B4-201ENST00000271628 FAM171A1Q5VUB5 890 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 SLC39A5Q6ZMH5 540 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 TAC4Q86UU9 113 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 CEP57Q86XR8 500 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 NUP93Q8N1F7 819 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 CRIPAKQ8N1N5 446 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 FBXO36Q8NEA4 188 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 CCDC110Q8TBZ0 833 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 RNF34Q969K3 372 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 TOX2Q96NM4 488 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 OSBPL2Q9H1P3 480 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 ETNK1Q9HBU6 452 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 KLC4Q9NSK0 619 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 OR12D3Q9UGF7 316 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 SLC24A2Q9UI40 661 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 ACTL7BQ9Y614 415 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 MFSD11O43934 449 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 ERCC2P18074 760 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 GAD2Q05329 585 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 EIF4EBP2Q13542 120 aaPredicted RBP15.79■□□□□ 0.12
SF3B4-201ENST00000271628 MSS51Q4VC12 460 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 CCDC38Q502W7 563 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 ARHGEF18Q6ZSZ5 1173 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 C3orf62Q6ZUJ4 267 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 MON1AQ86VX9 555 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 ANKMY2Q8IV38 441 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 MCUQ8NE86 351 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 BRD8Q9H0E9 1235 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 NSRP1Q9H0G5 558 aaKnown RBP15.79■□□□□ 0.12
SF3B4-201ENST00000271628 SAMD15Q9P1V8 674 aa15.79■□□□□ 0.12
SF3B4-201ENST00000271628 TTC3P53804 2025 aa15.78■□□□□ 0.12
SF3B4-201ENST00000271628 CCT8L1PA6NM43 557 aa15.78■□□□□ 0.12
SF3B4-201ENST00000271628 SPAG6O75602 509 aa15.78■□□□□ 0.12
SF3B4-201ENST00000271628 APRTP07741 180 aa15.78■□□□□ 0.12
SF3B4-201ENST00000271628 TPSB2P20231 275 aa15.78■□□□□ 0.12
SF3B4-201ENST00000271628 FGFR3P22607 806 aa15.78■□□□□ 0.12
SF3B4-201ENST00000271628 SERPINB6P35237 376 aa15.78■□□□□ 0.12
SF3B4-201ENST00000271628 FDFT1P37268 417 aa15.78■□□□□ 0.12
SF3B4-201ENST00000271628 SARNPP82979 210 aaKnown RBP15.78■□□□□ 0.12
SF3B4-201ENST00000271628 IFRD2Q12894 506 aaPredicted RBP15.78■□□□□ 0.12
SF3B4-201ENST00000271628 TPSAB1Q15661 275 aa15.78■□□□□ 0.12
SF3B4-201ENST00000271628 KLHL38Q2WGJ6 581 aa15.78■□□□□ 0.12
SF3B4-201ENST00000271628 ARHGAP18Q8N392 663 aa15.78■□□□□ 0.12
SF3B4-201ENST00000271628 LRRC39Q96DD0 335 aa15.78■□□□□ 0.12
SF3B4-201ENST00000271628 GPR62Q9BZJ7 368 aa15.78■□□□□ 0.12
SF3B4-201ENST00000271628 SLC40A1Q9NP59 571 aa15.78■□□□□ 0.12
SF3B4-201ENST00000271628 ANLNQ9NQW6 1124 aa15.78■□□□□ 0.12
SF3B4-201ENST00000271628 EURLQ9NYK6 297 aa15.78■□□□□ 0.12
SF3B4-201ENST00000271628 A0A0A0MRY4 1105 aa15.77■□□□□ 0.12
SF3B4-201ENST00000271628 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.77■□□□□ 0.12
SF3B4-201ENST00000271628 FAM72CH0Y354 149 aa15.77■□□□□ 0.12
SF3B4-201ENST00000271628 IRAK2O43187 625 aa15.77■□□□□ 0.12
SF3B4-201ENST00000271628 MX2P20592 715 aa15.77■□□□□ 0.12
SF3B4-201ENST00000271628 SCTRP47872 440 aa15.77■□□□□ 0.12
SF3B4-201ENST00000271628 SLC11A1P49279 550 aa15.77■□□□□ 0.12
SF3B4-201ENST00000271628 GPX6P59796 221 aa15.77■□□□□ 0.12
SF3B4-201ENST00000271628 CDK16Q00536 496 aa15.77■□□□□ 0.12
SF3B4-201ENST00000271628 AP1B1Q10567 949 aa15.77■□□□□ 0.12
SF3B4-201ENST00000271628 PRKD1Q15139 912 aaPredicted RBP15.77■□□□□ 0.12
SF3B4-201ENST00000271628 ANKRD20A2Q5SQ80 823 aa15.77■□□□□ 0.12
SF3B4-201ENST00000271628 FAM72AQ5TYM5 149 aa15.77■□□□□ 0.12
SF3B4-201ENST00000271628 ANKRD20A1Q5TYW2 823 aa15.77■□□□□ 0.12
SF3B4-201ENST00000271628 ANKRD20A3Q5VUR7 823 aa15.77■□□□□ 0.12
SF3B4-201ENST00000271628 FAM72DQ6L9T8 149 aa15.77■□□□□ 0.12
SF3B4-201ENST00000271628 FAM72BQ86X60 149 aa15.77■□□□□ 0.12
SF3B4-201ENST00000271628 CCNYQ8ND76 341 aa15.77■□□□□ 0.12
SF3B4-201ENST00000271628 SCLYQ96I15 445 aa15.77■□□□□ 0.12
SF3B4-201ENST00000271628 SPATA13Q96N96 652 aa15.77■□□□□ 0.12
SF3B4-201ENST00000271628 HAPLN3Q96S86 360 aa15.77■□□□□ 0.12
SF3B4-201ENST00000271628 LGMNQ99538 433 aa15.77■□□□□ 0.12
SF3B4-201ENST00000271628 PRMT1Q99873 361 aaKnown RBP15.77■□□□□ 0.12
SF3B4-201ENST00000271628 SMOC2Q9H3U7 446 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms