RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 BRAFP15056 766 aa17.15■□□□□ 0.34
CCDC40-201ENST00000269318 GEMIN4P57678 1058 aaKnown RBP17.15■□□□□ 0.34
CCDC40-201ENST00000269318 MPP2Q14168 576 aa17.15■□□□□ 0.34
CCDC40-201ENST00000269318 EFTUD2Q15029 972 aaKnown RBP eCLIP17.15■□□□□ 0.34
CCDC40-201ENST00000269318 MTFR1Q15390 333 aa17.15■□□□□ 0.34
CCDC40-201ENST00000269318 NFE2Q16621 373 aaPredicted RBP17.15■□□□□ 0.34
CCDC40-201ENST00000269318 ARHGEF18Q6ZSZ5 1173 aa17.15■□□□□ 0.34
CCDC40-201ENST00000269318 SRRM1Q8IYB3 904 aaKnown RBP17.15■□□□□ 0.34
CCDC40-201ENST00000269318 APBB2Q92870 758 aa17.15■□□□□ 0.34
CCDC40-201ENST00000269318 P2RY11Q96G91 374 aa17.15■□□□□ 0.34
CCDC40-201ENST00000269318 DEFB118Q96PH6 123 aa17.15■□□□□ 0.34
CCDC40-201ENST00000269318 ABCC13Q9NSE7 274 aa17.15■□□□□ 0.34
CCDC40-201ENST00000269318 MARCH5Q9NX47 278 aa17.15■□□□□ 0.34
CCDC40-201ENST00000269318 ABI2Q9NYB9 513 aaPredicted RBP17.15■□□□□ 0.34
CCDC40-201ENST00000269318 OGDHLQ9ULD0 1010 aa17.15■□□□□ 0.34
CCDC40-201ENST00000269318 SNX10Q9Y5X0 201 aa17.15■□□□□ 0.34
CCDC40-201ENST00000269318 RAD54BQ9Y620 910 aa17.15■□□□□ 0.34
CCDC40-201ENST00000269318 PPP1R12AO14974 1030 aaPredicted RBP17.15■□□□□ 0.34
CCDC40-201ENST00000269318 IRAK2O43187 625 aa17.15■□□□□ 0.34
CCDC40-201ENST00000269318 KLHL38Q2WGJ6 581 aa17.15■□□□□ 0.34
CCDC40-201ENST00000269318 NPWQ8N729 165 aa17.15■□□□□ 0.34
CCDC40-201ENST00000269318 ZNF317Q96PQ6 595 aaPredicted RBP17.15■□□□□ 0.34
CCDC40-201ENST00000269318 GPR62Q9BZJ7 368 aa17.15■□□□□ 0.34
CCDC40-201ENST00000269318 ARHGEF38Q9NXL2 777 aa17.15■□□□□ 0.34
CCDC40-201ENST00000269318 PSMC3IPQ9P2W1 217 aaPredicted RBP17.15■□□□□ 0.34
CCDC40-201ENST00000269318 OR12D3Q9UGF7 316 aa17.15■□□□□ 0.34
CCDC40-201ENST00000269318 RSPH14Q9UHP6 348 aa17.15■□□□□ 0.34
CCDC40-201ENST00000269318 RASA4BC9J798 803 aa17.14■□□□□ 0.33
CCDC40-201ENST00000269318 RNF103O00237 685 aa17.14■□□□□ 0.33
CCDC40-201ENST00000269318 RASA4O43374 803 aa17.14■□□□□ 0.33
CCDC40-201ENST00000269318 PQBP1O60828 265 aaKnown RBP17.14■□□□□ 0.33
CCDC40-201ENST00000269318 AP1B1Q10567 949 aa17.14■□□□□ 0.33
CCDC40-201ENST00000269318 WASHC5Q12768 1159 aa17.14■□□□□ 0.33
CCDC40-201ENST00000269318 IFRD2Q12894 506 aaPredicted RBP17.14■□□□□ 0.33
CCDC40-201ENST00000269318 FAM171A1Q5VUB5 890 aa17.14■□□□□ 0.33
CCDC40-201ENST00000269318 SCN4BQ8IWT1 228 aa17.14■□□□□ 0.33
CCDC40-201ENST00000269318 C8orf48Q96LL4 319 aa17.14■□□□□ 0.33
CCDC40-201ENST00000269318 OSBPL2Q9H1P3 480 aa17.14■□□□□ 0.33
CCDC40-201ENST00000269318 SMOC2Q9H3U7 446 aa17.14■□□□□ 0.33
CCDC40-201ENST00000269318 NMUR1Q9HB89 426 aa17.14■□□□□ 0.33
CCDC40-201ENST00000269318 PLAC1Q9HBJ0 212 aa17.14■□□□□ 0.33
CCDC40-201ENST00000269318 HCSTQ9UBK5 93 aa17.14■□□□□ 0.33
CCDC40-201ENST00000269318 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.13■□□□□ 0.33
CCDC40-201ENST00000269318 TCRBV9S1A1TA0A576 114 aa17.13■□□□□ 0.33
CCDC40-201ENST00000269318 OPHN1O60890 802 aa17.13■□□□□ 0.33
CCDC40-201ENST00000269318 SPAG6O75602 509 aa17.13■□□□□ 0.33
CCDC40-201ENST00000269318 LRIG2O94898 1065 aa17.13■□□□□ 0.33
CCDC40-201ENST00000269318 MYCP01106 439 aaPredicted RBP17.13■□□□□ 0.33
CCDC40-201ENST00000269318 ATP2A2P16615 1042 aaKnown RBP17.13■□□□□ 0.33
CCDC40-201ENST00000269318 FGFR3P22607 806 aa17.13■□□□□ 0.33
CCDC40-201ENST00000269318 FDFT1P37268 417 aa17.13■□□□□ 0.33
CCDC40-201ENST00000269318 SLC11A1P49279 550 aa17.13■□□□□ 0.33
CCDC40-201ENST00000269318 PKN2Q16513 984 aaKnown RBP17.13■□□□□ 0.33
CCDC40-201ENST00000269318 BTBD8Q5XKL5 378 aa17.13■□□□□ 0.33
CCDC40-201ENST00000269318 ADGRD1Q6QNK2 874 aa17.13■□□□□ 0.33
CCDC40-201ENST00000269318 DENND5BQ6ZUT9 1274 aa17.13■□□□□ 0.33
CCDC40-201ENST00000269318 PDZD4Q76G19 769 aaPredicted RBP17.13■□□□□ 0.33
CCDC40-201ENST00000269318 LRRC39Q96DD0 335 aa17.13■□□□□ 0.33
CCDC40-201ENST00000269318 EPAS1Q99814 870 aa17.13■□□□□ 0.33
CCDC40-201ENST00000269318 PRMT1Q99873 361 aaKnown RBP17.13■□□□□ 0.33
CCDC40-201ENST00000269318 NEU3Q9UQ49 428 aa17.13■□□□□ 0.33
CCDC40-201ENST00000269318 TET1Q8NFU7 2136 aa17.13■□□□□ 0.33
CCDC40-201ENST00000269318 C1QAP02745 245 aa17.13■□□□□ 0.33
CCDC40-201ENST00000269318 CXCL10P02778 98 aa17.13■□□□□ 0.33
CCDC40-201ENST00000269318 CYP2C18P33260 490 aa17.13■□□□□ 0.33
CCDC40-201ENST00000269318 MAGEA11P43364 429 aa17.13■□□□□ 0.33
CCDC40-201ENST00000269318 GPR15P49685 360 aa17.13■□□□□ 0.33
CCDC40-201ENST00000269318 CTXN3Q4LDR2 81 aa17.13■□□□□ 0.33
CCDC40-201ENST00000269318 NPAS4Q8IUM7 802 aa17.13■□□□□ 0.33
CCDC40-201ENST00000269318 CCNYQ8ND76 341 aa17.13■□□□□ 0.33
CCDC40-201ENST00000269318 CASP10Q92851 521 aa17.13■□□□□ 0.33
CCDC40-201ENST00000269318 CHMP6Q96FZ7 201 aa17.13■□□□□ 0.33
CCDC40-201ENST00000269318 PAFAH2Q99487 392 aa17.13■□□□□ 0.33
CCDC40-201ENST00000269318 LRFN2Q9ULH4 789 aa17.13■□□□□ 0.33
CCDC40-201ENST00000269318 SCML2Q9UQR0 700 aa17.13■□□□□ 0.33
CCDC40-201ENST00000269318 TANC1Q9C0D5 1861 aa17.12■□□□□ 0.33
CCDC40-201ENST00000269318 TTC3P53804 2025 aa17.12■□□□□ 0.33
CCDC40-201ENST00000269318 OR6C75A6NL08 312 aa17.12■□□□□ 0.33
CCDC40-201ENST00000269318 TRIM66O15016 1216 aa17.12■□□□□ 0.33
CCDC40-201ENST00000269318 NCAM2O15394 837 aa17.12■□□□□ 0.33
CCDC40-201ENST00000269318 PIAS1O75925 651 aa17.12■□□□□ 0.33
CCDC40-201ENST00000269318 STK10O94804 968 aaKnown RBP17.12■□□□□ 0.33
CCDC40-201ENST00000269318 ALDH2P05091 517 aa17.12■□□□□ 0.33
CCDC40-201ENST00000269318 DRD4P21917 467 aa17.12■□□□□ 0.33
CCDC40-201ENST00000269318 PPIDQ08752 370 aaKnown RBP17.12■□□□□ 0.33
CCDC40-201ENST00000269318 QPCTQ16769 361 aa17.12■□□□□ 0.33
CCDC40-201ENST00000269318 DDR2Q16832 855 aa17.12■□□□□ 0.33
CCDC40-201ENST00000269318 BRMS1LQ5PSV4 323 aa17.12■□□□□ 0.33
CCDC40-201ENST00000269318 ARTNQ5T4W7 220 aa17.12■□□□□ 0.33
CCDC40-201ENST00000269318 SDHAF4Q5VUM1 108 aa17.12■□□□□ 0.33
CCDC40-201ENST00000269318 CEP57Q86XR8 500 aa17.12■□□□□ 0.33
CCDC40-201ENST00000269318 ZNF567Q8N184 647 aa17.12■□□□□ 0.33
CCDC40-201ENST00000269318 NUP93Q8N1F7 819 aa17.12■□□□□ 0.33
CCDC40-201ENST00000269318 COLGALT1Q8NBJ5 622 aa17.12■□□□□ 0.33
CCDC40-201ENST00000269318 DCAKDQ8WVC6 231 aa17.12■□□□□ 0.33
CCDC40-201ENST00000269318 SCLYQ96I15 445 aa17.12■□□□□ 0.33
CCDC40-201ENST00000269318 B3GALT6Q96L58 329 aa17.12■□□□□ 0.33
CCDC40-201ENST00000269318 SIGLEC10Q96LC7 697 aa17.12■□□□□ 0.33
CCDC40-201ENST00000269318 CYTH2Q99418 400 aa17.12■□□□□ 0.33
CCDC40-201ENST00000269318 FAM107BQ9H098 131 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms