RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 TMPRSS6Q8IU80 811 aa18.41■□□□□ 0.54
COL5A3-201ENST00000264828 ZCCHC7Q8N3Z6 543 aaKnown RBP18.41■□□□□ 0.54
COL5A3-201ENST00000264828 RNF145Q96MT1 663 aa18.41■□□□□ 0.54
COL5A3-201ENST00000264828 SCNN1BP51168 640 aa18.41■□□□□ 0.54
COL5A3-201ENST00000264828 FOXR1Q6PIV2 292 aa18.41■□□□□ 0.54
COL5A3-201ENST00000264828 NSMCE2Q96MF7 247 aa18.41■□□□□ 0.54
COL5A3-201ENST00000264828 LIMD1Q9UGP4 676 aa18.41■□□□□ 0.54
COL5A3-201ENST00000264828 TPP2P29144 1249 aaPredicted RBP18.41■□□□□ 0.54
COL5A3-201ENST00000264828 SSTR1P30872 391 aa18.41■□□□□ 0.54
COL5A3-201ENST00000264828 YWHAZP63104 245 aaKnown RBP18.41■□□□□ 0.54
COL5A3-201ENST00000264828 CCDC157Q569K6 752 aa18.41■□□□□ 0.54
COL5A3-201ENST00000264828 ACTL9Q8TC94 416 aa18.41■□□□□ 0.54
COL5A3-201ENST00000264828 EDEM1Q92611 657 aa18.41■□□□□ 0.54
COL5A3-201ENST00000264828 MID1IP1Q9NPA3 183 aa18.41■□□□□ 0.54
COL5A3-201ENST00000264828 WEE1P30291 646 aa18.41■□□□□ 0.54
COL5A3-201ENST00000264828 KCNMB4Q86W47 210 aa18.41■□□□□ 0.54
COL5A3-201ENST00000264828 ARHGEF19Q8IW93 802 aa18.41■□□□□ 0.54
COL5A3-201ENST00000264828 ZMYM5Q9UJ78 669 aa18.41■□□□□ 0.54
COL5A3-201ENST00000264828 DYTNA2CJ06 578 aa18.4■□□□□ 0.54
COL5A3-201ENST00000264828 CLOCKO15516 846 aa18.4■□□□□ 0.54
COL5A3-201ENST00000264828 CLK2P49760 499 aaKnown RBP18.4■□□□□ 0.54
COL5A3-201ENST00000264828 MTMR8Q96EF0 704 aa18.4■□□□□ 0.54
COL5A3-201ENST00000264828 COLEC11Q9BWP8 271 aa18.4■□□□□ 0.54
COL5A3-201ENST00000264828 NINJ2Q9NZG7 142 aa18.4■□□□□ 0.54
COL5A3-201ENST00000264828 STK39Q9UEW8 545 aa18.4■□□□□ 0.54
COL5A3-201ENST00000264828 TMEM191CA6NGB0 347 aa18.4■□□□□ 0.54
COL5A3-201ENST00000264828 TSPAN3O60637 253 aa18.4■□□□□ 0.54
COL5A3-201ENST00000264828 SUPT20HL2P0C7V6 817 aa18.4■□□□□ 0.54
COL5A3-201ENST00000264828 TKTL1P51854 596 aa18.4■□□□□ 0.54
COL5A3-201ENST00000264828 TROAPQ12815 778 aa18.4■□□□□ 0.54
COL5A3-201ENST00000264828 PLCL1Q15111 1095 aa18.4■□□□□ 0.54
COL5A3-201ENST00000264828 ERMARDQ5T6L9 678 aa18.4■□□□□ 0.54
COL5A3-201ENST00000264828 NDUFAF1Q9Y375 327 aa18.4■□□□□ 0.54
COL5A3-201ENST00000264828 CNTNAP2Q9UHC6 1331 aa18.4■□□□□ 0.54
COL5A3-201ENST00000264828 SNPHO15079 494 aa18.4■□□□□ 0.54
COL5A3-201ENST00000264828 SREBF2Q12772 1141 aa18.4■□□□□ 0.54
COL5A3-201ENST00000264828 GRTP1Q5TC63 336 aa18.4■□□□□ 0.54
COL5A3-201ENST00000264828 FBXO16Q8IX29 292 aaPredicted RBP18.4■□□□□ 0.54
COL5A3-201ENST00000264828 MTFMTQ96DP5 389 aaKnown RBP18.4■□□□□ 0.54
COL5A3-201ENST00000264828 APOPT1Q96IL0 206 aa18.4■□□□□ 0.54
COL5A3-201ENST00000264828 YWHAQP27348 245 aa18.4■□□□□ 0.54
COL5A3-201ENST00000264828 GUCA1AP43080 201 aaPredicted RBP18.4■□□□□ 0.54
COL5A3-201ENST00000264828 ZNF844Q08AG5 666 aa18.4■□□□□ 0.54
COL5A3-201ENST00000264828 TMC3Q7Z5M5 1100 aa18.4■□□□□ 0.54
COL5A3-201ENST00000264828 TFAP2DQ7Z6R9 452 aa18.4■□□□□ 0.54
COL5A3-201ENST00000264828 SERPINE1P05121 402 aa18.4■□□□□ 0.54
COL5A3-201ENST00000264828 XRRA1Q6P2D8 792 aa18.4■□□□□ 0.54
COL5A3-201ENST00000264828 ILDR2Q71H61 639 aa18.4■□□□□ 0.54
COL5A3-201ENST00000264828 ACER1Q8TDN7 264 aa18.4■□□□□ 0.54
COL5A3-201ENST00000264828 PCDH9Q9HC56 1237 aa18.4■□□□□ 0.54
COL5A3-201ENST00000264828 CASTOR2A6NHX0 329 aa18.39■□□□□ 0.53
COL5A3-201ENST00000264828 MFN2O95140 757 aa18.39■□□□□ 0.53
COL5A3-201ENST00000264828 GZMAP12544 262 aa18.39■□□□□ 0.53
COL5A3-201ENST00000264828 GRK3P35626 688 aa18.39■□□□□ 0.53
COL5A3-201ENST00000264828 SKIV2L2P42285 1042 aaKnown RBP18.39■□□□□ 0.53
COL5A3-201ENST00000264828 MCL1Q07820 350 aa18.39■□□□□ 0.53
COL5A3-201ENST00000264828 ZNF518BQ9C0D4 1074 aa18.39■□□□□ 0.53
COL5A3-201ENST00000264828 FHDC1Q9C0D6 1143 aaPredicted RBP18.39■□□□□ 0.53
COL5A3-201ENST00000264828 CLTBP09497 229 aa18.39■□□□□ 0.53
COL5A3-201ENST00000264828 CXCL8P10145 99 aa18.39■□□□□ 0.53
COL5A3-201ENST00000264828 NOS3P29474 1203 aa18.39■□□□□ 0.53
COL5A3-201ENST00000264828 CCDC153Q494R4 210 aa18.39■□□□□ 0.53
COL5A3-201ENST00000264828 ZNF618Q5T7W0 954 aa18.39■□□□□ 0.53
COL5A3-201ENST00000264828 CASP12Q6UXS9 341 aa18.39■□□□□ 0.53
COL5A3-201ENST00000264828 SERAC1Q96JX3 654 aa18.39■□□□□ 0.53
COL5A3-201ENST00000264828 POMKQ9H5K3 350 aa18.39■□□□□ 0.53
COL5A3-201ENST00000264828 TBC1D13Q9NVG8 400 aa18.39■□□□□ 0.53
COL5A3-201ENST00000264828 ZC3H11AO75152 810 aaKnown RBP eCLIP18.39■□□□□ 0.53
COL5A3-201ENST00000264828 F9P00740 461 aa18.39■□□□□ 0.53
COL5A3-201ENST00000264828 CD151P48509 253 aa18.39■□□□□ 0.53
COL5A3-201ENST00000264828 FGD3Q5JSP0 725 aa18.39■□□□□ 0.53
COL5A3-201ENST00000264828 MACC1Q6ZN28 852 aa18.39■□□□□ 0.53
COL5A3-201ENST00000264828 FAM45AQ8TCE6 357 aa18.39■□□□□ 0.53
COL5A3-201ENST00000264828 NAT9Q9BTE0 207 aa18.39■□□□□ 0.53
COL5A3-201ENST00000264828 RBM22Q9NW64 420 aaKnown RBP eCLIP18.39■□□□□ 0.53
COL5A3-201ENST00000264828 HPSEQ9Y251 543 aa18.39■□□□□ 0.53
COL5A3-201ENST00000264828 PPLO60437 1756 aa18.39■□□□□ 0.53
COL5A3-201ENST00000264828 KPNA4O00629 521 aaPredicted RBP18.39■□□□□ 0.53
COL5A3-201ENST00000264828 SH3BGRLO75368 114 aa18.39■□□□□ 0.53
COL5A3-201ENST00000264828 PPIDQ08752 370 aaKnown RBP18.39■□□□□ 0.53
COL5A3-201ENST00000264828 CTXN3Q4LDR2 81 aa18.39■□□□□ 0.53
COL5A3-201ENST00000264828 STK32CQ86UX6 486 aa18.39■□□□□ 0.53
COL5A3-201ENST00000264828 SNX32Q86XE0 403 aa18.39■□□□□ 0.53
COL5A3-201ENST00000264828 WDR49Q8IV35 697 aa18.39■□□□□ 0.53
COL5A3-201ENST00000264828 CACTIN-AS1Q8N1I8 211 aa18.39■□□□□ 0.53
COL5A3-201ENST00000264828 OLFM1Q99784 485 aa18.39■□□□□ 0.53
COL5A3-201ENST00000264828 ADGRE3Q9BY15 652 aa18.39■□□□□ 0.53
COL5A3-201ENST00000264828 PRRG3Q9BZD7 231 aa18.39■□□□□ 0.53
COL5A3-201ENST00000264828 UBXN6Q9BZV1 441 aa18.39■□□□□ 0.53
COL5A3-201ENST00000264828 CEP44Q9C0F1 390 aa18.39■□□□□ 0.53
COL5A3-201ENST00000264828 CCDC167Q9P0B6 97 aa18.39■□□□□ 0.53
COL5A3-201ENST00000264828 ZNF720Q7Z2F6 126 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 OSCP1Q8WVF1 389 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 BDH2Q9BUT1 245 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 DGCR6LQ9BY27 220 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 H7C4K7 107 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 MRASO14807 208 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 C21orf59P57076 290 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 FAM9CQ8IZT9 166 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 KBTBD4Q9NVX7 518 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms