RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 MZF1P28698 734 aaPredicted RBP14.34□□□□□ -0.11
CDH3-201ENST00000264012 ZNF135P52742 658 aaPredicted RBP14.34□□□□□ -0.11
CDH3-201ENST00000264012 RPL7AP62424 266 aaKnown RBP14.34□□□□□ -0.11
CDH3-201ENST00000264012 MRPS6P82932 125 aaKnown RBP14.34□□□□□ -0.11
CDH3-201ENST00000264012 BTKQ06187 659 aa14.34□□□□□ -0.11
CDH3-201ENST00000264012 SPDYCQ5MJ68 293 aa14.34□□□□□ -0.11
CDH3-201ENST00000264012 DAB2IPQ5VWQ8 1189 aa14.34□□□□□ -0.11
CDH3-201ENST00000264012 APOPT1Q96IL0 206 aa14.34□□□□□ -0.11
CDH3-201ENST00000264012 SRPK1Q96SB4 655 aaKnown RBP14.34□□□□□ -0.11
CDH3-201ENST00000264012 UNKQ9C0B0 810 aaKnown RBP14.34□□□□□ -0.11
CDH3-201ENST00000264012 ZCWPW1Q9H0M4 648 aa14.34□□□□□ -0.11
CDH3-201ENST00000264012 PEAK1Q9H792 1746 aa14.34□□□□□ -0.11
CDH3-201ENST00000264012 USP12O75317 370 aa14.34□□□□□ -0.11
CDH3-201ENST00000264012 FAAP100Q0VG06 881 aa14.34□□□□□ -0.11
CDH3-201ENST00000264012 ZBTB17Q13105 803 aa14.34□□□□□ -0.11
CDH3-201ENST00000264012 ITGA9Q13797 1035 aa14.34□□□□□ -0.11
CDH3-201ENST00000264012 GRTP1Q5TC63 336 aa14.34□□□□□ -0.11
CDH3-201ENST00000264012 ZNF384Q8TF68 577 aa14.34□□□□□ -0.11
CDH3-201ENST00000264012 CIPCQ9C0C6 399 aa14.34□□□□□ -0.11
CDH3-201ENST00000264012 DDX20Q9UHI6 824 aaKnown RBP14.34□□□□□ -0.11
CDH3-201ENST00000264012 MYO1GB0I1T2 1018 aa14.33□□□□□ -0.11
CDH3-201ENST00000264012 MAP2K7O14733 419 aa14.33□□□□□ -0.11
CDH3-201ENST00000264012 LZTS3O60299 673 aaPredicted RBP14.33□□□□□ -0.11
CDH3-201ENST00000264012 ETS1P14921 441 aa14.33□□□□□ -0.11
CDH3-201ENST00000264012 MTA1Q13330 715 aa14.33□□□□□ -0.11
CDH3-201ENST00000264012 SLC45A4Q5BKX6 768 aa14.33□□□□□ -0.11
CDH3-201ENST00000264012 SPANXN3Q5MJ09 141 aa14.33□□□□□ -0.11
CDH3-201ENST00000264012 LBX2Q6XYB7 198 aa14.33□□□□□ -0.11
CDH3-201ENST00000264012 ZNF555Q8NEP9 628 aa14.33□□□□□ -0.11
CDH3-201ENST00000264012 ECSITQ9BQ95 431 aa14.33□□□□□ -0.11
CDH3-201ENST00000264012 SPATA16Q9BXB7 569 aa14.33□□□□□ -0.11
CDH3-201ENST00000264012 CLCA2Q9UQC9 943 aa14.33□□□□□ -0.11
CDH3-201ENST00000264012 EIF3LQ9Y262 564 aaKnown RBP14.33□□□□□ -0.11
CDH3-201ENST00000264012 V9GYQ6 96 aa14.33□□□□□ -0.11
CDH3-201ENST00000264012 KNDC1Q76NI1 1749 aa14.33□□□□□ -0.12
CDH3-201ENST00000264012 A0A0B4J269 797 aa14.33□□□□□ -0.12
CDH3-201ENST00000264012 OPLAHO14841 1288 aa14.33□□□□□ -0.12
CDH3-201ENST00000264012 MPOP05164 745 aa14.33□□□□□ -0.12
CDH3-201ENST00000264012 CALB2P22676 271 aa14.33□□□□□ -0.12
CDH3-201ENST00000264012 ZNF284Q2VY69 593 aa14.33□□□□□ -0.12
CDH3-201ENST00000264012 LIASO43766 372 aa14.33□□□□□ -0.12
CDH3-201ENST00000264012 TSPAN3O60637 253 aa14.33□□□□□ -0.12
CDH3-201ENST00000264012 CABYRO75952 493 aa14.33□□□□□ -0.12
CDH3-201ENST00000264012 TRUB2O95900 331 aaKnown RBP14.33□□□□□ -0.12
CDH3-201ENST00000264012 RAG1P15918 1043 aa14.33□□□□□ -0.12
CDH3-201ENST00000264012 TFE3P19532 575 aaPredicted RBP14.33□□□□□ -0.12
CDH3-201ENST00000264012 CRYMQ14894 314 aa14.33□□□□□ -0.12
CDH3-201ENST00000264012 HIST2H2ACQ16777 129 aaPredicted RBP14.33□□□□□ -0.12
CDH3-201ENST00000264012 ZNF470Q6ECI4 717 aa14.33□□□□□ -0.12
CDH3-201ENST00000264012 HIST2H2AA3Q6FI13 130 aa14.33□□□□□ -0.12
CDH3-201ENST00000264012 ANKRD52Q8NB46 1076 aa14.33□□□□□ -0.12
CDH3-201ENST00000264012 B3GALNT2Q8NCR0 500 aa14.33□□□□□ -0.12
CDH3-201ENST00000264012 LRRC39Q96DD0 335 aa14.33□□□□□ -0.12
CDH3-201ENST00000264012 DACH2Q96NX9 599 aa14.33□□□□□ -0.12
CDH3-201ENST00000264012 SNRNP25Q9BV90 132 aaKnown RBP14.33□□□□□ -0.12
CDH3-201ENST00000264012 ABCC13Q9NSE7 274 aa14.33□□□□□ -0.12
CDH3-201ENST00000264012 SPASTQ9UBP0 616 aa14.33□□□□□ -0.12
CDH3-201ENST00000264012 OR12D3Q9UGF7 316 aa14.33□□□□□ -0.12
CDH3-201ENST00000264012 IGKV6D-41A0A0C4DH26 115 aa14.33□□□□□ -0.12
CDH3-201ENST00000264012 TUFMP49411 452 aaKnown RBP14.33□□□□□ -0.12
CDH3-201ENST00000264012 RCN1Q15293 331 aa14.33□□□□□ -0.12
CDH3-201ENST00000264012 NBPF20Q3BBV1 942 aa14.33□□□□□ -0.12
CDH3-201ENST00000264012 CACHD1Q5VU97 1274 aa14.33□□□□□ -0.12
CDH3-201ENST00000264012 NPNTQ6UXI9 565 aa14.33□□□□□ -0.12
CDH3-201ENST00000264012 LGI2Q8N0V4 545 aa14.33□□□□□ -0.12
CDH3-201ENST00000264012 TDRD5Q8NAT2 981 aaKnown RBP14.33□□□□□ -0.12
CDH3-201ENST00000264012 ATXN2LQ8WWM7 1075 aaKnown RBP14.33□□□□□ -0.12
CDH3-201ENST00000264012 CYGBQ8WWM9 190 aa14.33□□□□□ -0.12
CDH3-201ENST00000264012 CNDP1Q96KN2 507 aa14.33□□□□□ -0.12
CDH3-201ENST00000264012 THUMPD3Q9BV44 507 aaKnown RBP14.33□□□□□ -0.12
CDH3-201ENST00000264012 LRRC19Q9H756 370 aa14.33□□□□□ -0.12
CDH3-201ENST00000264012 UTP6Q9NYH9 597 aaKnown RBP14.33□□□□□ -0.12
CDH3-201ENST00000264012 SCHIP1Q9P0W5 487 aaPredicted RBP14.33□□□□□ -0.12
CDH3-201ENST00000264012 NID2Q14112 1375 aa14.32□□□□□ -0.12
CDH3-201ENST00000264012 A0A096LPK6 155 aa14.32□□□□□ -0.12
CDH3-201ENST00000264012 ERI2A8K979 691 aaKnown RBP14.32□□□□□ -0.12
CDH3-201ENST00000264012 TPBGLP0DKB5 382 aa14.32□□□□□ -0.12
CDH3-201ENST00000264012 ARF4P18085 180 aaPredicted RBP14.32□□□□□ -0.12
CDH3-201ENST00000264012 KCNA3P22001 575 aa14.32□□□□□ -0.12
CDH3-201ENST00000264012 TNFRSF8P28908 595 aa14.32□□□□□ -0.12
CDH3-201ENST00000264012 ATP6V1E1P36543 226 aa14.32□□□□□ -0.12
CDH3-201ENST00000264012 GALNTL6Q49A17 601 aa14.32□□□□□ -0.12
CDH3-201ENST00000264012 SEMA4DQ92854 862 aa14.32□□□□□ -0.12
CDH3-201ENST00000264012 RXFP1Q9HBX9 757 aa14.32□□□□□ -0.12
CDH3-201ENST00000264012 ETNK2Q9NVF9 386 aa14.32□□□□□ -0.12
CDH3-201ENST00000264012 SOX13Q9UN79 622 aa14.32□□□□□ -0.12
CDH3-201ENST00000264012 SERPINE1P05121 402 aa14.32□□□□□ -0.12
CDH3-201ENST00000264012 VHLP40337 213 aa14.32□□□□□ -0.12
CDH3-201ENST00000264012 PDPK2PQ6A1A2 396 aa14.32□□□□□ -0.12
CDH3-201ENST00000264012 ZNF467Q7Z7K2 595 aaPredicted RBP14.32□□□□□ -0.12
CDH3-201ENST00000264012 APLFQ8IW19 511 aaPredicted RBP14.32□□□□□ -0.12
CDH3-201ENST00000264012 KREMEN1Q96MU8 473 aa14.32□□□□□ -0.12
CDH3-201ENST00000264012 CPNE1Q99829 537 aa14.32□□□□□ -0.12
CDH3-201ENST00000264012 PRR23AA6NEV1 266 aa14.32□□□□□ -0.12
CDH3-201ENST00000264012 TPST1O60507 370 aa14.32□□□□□ -0.12
CDH3-201ENST00000264012 KCNA4P22459 653 aa14.32□□□□□ -0.12
CDH3-201ENST00000264012 WEE1P30291 646 aa14.32□□□□□ -0.12
CDH3-201ENST00000264012 MRPS35P82673 323 aaKnown RBP14.32□□□□□ -0.12
CDH3-201ENST00000264012 PLIN5Q00G26 463 aa14.32□□□□□ -0.12
CDH3-201ENST00000264012 PARP6Q2NL67 630 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms