RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 ARTNQ5T4W7 220 aa23.66■■□□□ 1.38
SMARCB1-201ENST00000263121 MANEALQ5VSG8 457 aa23.66■■□□□ 1.38
SMARCB1-201ENST00000263121 PLPP4Q5VZY2 271 aa23.66■■□□□ 1.38
SMARCB1-201ENST00000263121 SPATA31D4Q6ZUB0 917 aa23.66■■□□□ 1.38
SMARCB1-201ENST00000263121 DNAJB7Q7Z6W7 309 aaPredicted RBP23.66■■□□□ 1.38
SMARCB1-201ENST00000263121 PRUNE1Q86TP1 453 aa23.66■■□□□ 1.38
SMARCB1-201ENST00000263121 ZC3H18Q86VM9 953 aaKnown RBP23.66■■□□□ 1.38
SMARCB1-201ENST00000263121 SNF8Q96H20 258 aa23.66■■□□□ 1.38
SMARCB1-201ENST00000263121 FAM129AQ9BZQ8 928 aa23.66■■□□□ 1.38
SMARCB1-201ENST00000263121 C10orf88Q9H8K7 445 aa23.66■■□□□ 1.38
SMARCB1-201ENST00000263121 PCDH9Q9HC56 1237 aa23.66■■□□□ 1.38
SMARCB1-201ENST00000263121 DTLQ9NZJ0 730 aa23.66■■□□□ 1.38
SMARCB1-201ENST00000263121 NEU3Q9UQ49 428 aa23.66■■□□□ 1.38
SMARCB1-201ENST00000263121 HIDE1A8MVS5 230 aa23.65■■□□□ 1.38
SMARCB1-201ENST00000263121 ERCC2P18074 760 aa23.65■■□□□ 1.38
SMARCB1-201ENST00000263121 HTR7P34969 479 aa23.65■■□□□ 1.38
SMARCB1-201ENST00000263121 GDF10P55107 478 aa23.65■■□□□ 1.38
SMARCB1-201ENST00000263121 NRG1Q02297 640 aaPredicted RBP23.65■■□□□ 1.38
SMARCB1-201ENST00000263121 TAF12Q16514 161 aa23.65■■□□□ 1.38
SMARCB1-201ENST00000263121 KLHDC10Q6PID8 442 aa23.65■■□□□ 1.38
SMARCB1-201ENST00000263121 TADA2BQ86TJ2 420 aa23.65■■□□□ 1.38
SMARCB1-201ENST00000263121 UNC45BQ8IWX7 931 aa23.65■■□□□ 1.38
SMARCB1-201ENST00000263121 OLFM3Q96PB7 478 aa23.65■■□□□ 1.38
SMARCB1-201ENST00000263121 TRPM5Q9NZQ8 1165 aa23.65■■□□□ 1.38
SMARCB1-201ENST00000263121 XPO7Q9UIA9 1087 aaKnown RBP23.65■■□□□ 1.38
SMARCB1-201ENST00000263121 H7C0C1 242 aa23.64■■□□□ 1.38
SMARCB1-201ENST00000263121 TP73O15350 636 aa23.64■■□□□ 1.38
SMARCB1-201ENST00000263121 ATP8B1O43520 1251 aa23.64■■□□□ 1.38
SMARCB1-201ENST00000263121 MFSD11O43934 449 aa23.64■■□□□ 1.38
SMARCB1-201ENST00000263121 CA3P07451 260 aa23.64■■□□□ 1.38
SMARCB1-201ENST00000263121 GGCXP38435 758 aa23.64■■□□□ 1.38
SMARCB1-201ENST00000263121 ATP5OP48047 213 aa23.64■■□□□ 1.38
SMARCB1-201ENST00000263121 PPP3CCP48454 512 aa23.64■■□□□ 1.38
SMARCB1-201ENST00000263121 TUBP50607 506 aa23.64■■□□□ 1.38
SMARCB1-201ENST00000263121 RING1Q06587 406 aa23.64■■□□□ 1.38
SMARCB1-201ENST00000263121 DARS2Q6PI48 645 aaKnown RBP23.64■■□□□ 1.38
SMARCB1-201ENST00000263121 ITIH5Q86UX2 942 aa23.64■■□□□ 1.38
SMARCB1-201ENST00000263121 MIB1Q86YT6 1006 aa23.64■■□□□ 1.38
SMARCB1-201ENST00000263121 RSAD2Q8WXG1 361 aa23.64■■□□□ 1.38
SMARCB1-201ENST00000263121 ART4Q93070 314 aa23.64■■□□□ 1.38
SMARCB1-201ENST00000263121 GDAP1L1Q96MZ0 367 aa23.64■■□□□ 1.38
SMARCB1-201ENST00000263121 UXTQ9UBK9 157 aaPredicted RBP23.64■■□□□ 1.38
SMARCB1-201ENST00000263121 ASB3Q9Y575 518 aa23.64■■□□□ 1.38
SMARCB1-201ENST00000263121 SLC12A8A0AV02 714 aa23.64■■□□□ 1.37
SMARCB1-201ENST00000263121 BCLAF3A2AJT9 711 aaKnown RBP23.64■■□□□ 1.37
SMARCB1-201ENST00000263121 MAP3K6O95382 1288 aa23.64■■□□□ 1.37
SMARCB1-201ENST00000263121 APOEP02649 317 aa23.64■■□□□ 1.37
SMARCB1-201ENST00000263121 ZSCAN5DPP0CG00 497 aa23.64■■□□□ 1.37
SMARCB1-201ENST00000263121 ETS1P14921 441 aa23.64■■□□□ 1.37
SMARCB1-201ENST00000263121 ITIH2P19823 946 aa23.64■■□□□ 1.37
SMARCB1-201ENST00000263121 HOXC13P31276 330 aa23.64■■□□□ 1.37
SMARCB1-201ENST00000263121 STIP1P31948 543 aaKnown RBP23.64■■□□□ 1.37
SMARCB1-201ENST00000263121 ADCY8P40145 1251 aa23.64■■□□□ 1.37
SMARCB1-201ENST00000263121 KPNA1P52294 538 aaPredicted RBP23.64■■□□□ 1.37
SMARCB1-201ENST00000263121 CAMK1Q14012 370 aa23.64■■□□□ 1.37
SMARCB1-201ENST00000263121 HECTD3Q5T447 861 aa23.64■■□□□ 1.37
SMARCB1-201ENST00000263121 COL13A1Q5TAT6 717 aaPredicted RBP23.64■■□□□ 1.37
SMARCB1-201ENST00000263121 CCDC149Q6ZUS6 474 aa23.64■■□□□ 1.37
SMARCB1-201ENST00000263121 FBXO25Q8TCJ0 367 aa23.64■■□□□ 1.37
SMARCB1-201ENST00000263121 C1orf74Q96LT6 269 aa23.64■■□□□ 1.37
SMARCB1-201ENST00000263121 SAMD11Q96NU1 681 aa23.64■■□□□ 1.37
SMARCB1-201ENST00000263121 SIK2Q9H0K1 926 aa23.64■■□□□ 1.37
SMARCB1-201ENST00000263121 USP29Q9HBJ7 922 aa23.64■■□□□ 1.37
SMARCB1-201ENST00000263121 DNMT3LQ9UJW3 386 aa23.64■■□□□ 1.37
SMARCB1-201ENST00000263121 HBS1LQ9Y450 684 aaKnown RBP23.64■■□□□ 1.37
SMARCB1-201ENST00000263121 PCDHA11Q9Y5I1 949 aa23.64■■□□□ 1.37
SMARCB1-201ENST00000263121 HS3ST4Q9Y661 456 aa23.64■■□□□ 1.37
SMARCB1-201ENST00000263121 CFAP69A5D8W1 941 aa23.63■■□□□ 1.37
SMARCB1-201ENST00000263121 CCDC85CA6NKD9 419 aa23.63■■□□□ 1.37
SMARCB1-201ENST00000263121 GRM6O15303 877 aa23.63■■□□□ 1.37
SMARCB1-201ENST00000263121 MOCS2O96007 188 aaPredicted RBP23.63■■□□□ 1.37
SMARCB1-201ENST00000263121 ATP5C1P36542 298 aaKnown RBP23.63■■□□□ 1.37
SMARCB1-201ENST00000263121 TNNT3P45378 269 aaPredicted RBP23.63■■□□□ 1.37
SMARCB1-201ENST00000263121 VPS41P49754 854 aa23.63■■□□□ 1.37
SMARCB1-201ENST00000263121 PLTPP55058 493 aa23.63■■□□□ 1.37
SMARCB1-201ENST00000263121 BZW1Q7L1Q6 419 aaKnown RBP23.63■■□□□ 1.37
SMARCB1-201ENST00000263121 HDXQ7Z353 690 aa23.63■■□□□ 1.37
SMARCB1-201ENST00000263121 TMEM150AQ86TG1 271 aa23.63■■□□□ 1.37
SMARCB1-201ENST00000263121 CDKL3Q8IVW4 592 aaPredicted RBP23.63■■□□□ 1.37
SMARCB1-201ENST00000263121 FAM71DQ8N9W8 422 aa23.63■■□□□ 1.37
SMARCB1-201ENST00000263121 KREMEN2Q8NCW0 462 aa23.63■■□□□ 1.37
SMARCB1-201ENST00000263121 RTP4Q96DX8 246 aa23.63■■□□□ 1.37
SMARCB1-201ENST00000263121 ZNF334Q9HCZ1 680 aaPredicted RBP23.63■■□□□ 1.37
SMARCB1-201ENST00000263121 LAMA2P24043 3122 aaKnown RBP23.62■■□□□ 1.37
SMARCB1-201ENST00000263121 MAP2K7O14733 419 aa23.62■■□□□ 1.37
SMARCB1-201ENST00000263121 SASH3O75995 380 aa23.62■■□□□ 1.37
SMARCB1-201ENST00000263121 GLUD1P00367 558 aa23.62■■□□□ 1.37
SMARCB1-201ENST00000263121 IFNB1P01574 187 aa23.62■■□□□ 1.37
SMARCB1-201ENST00000263121 EPHB2P29323 1055 aa23.62■■□□□ 1.37
SMARCB1-201ENST00000263121 MLLT6P55198 1093 aaPredicted RBP23.62■■□□□ 1.37
SMARCB1-201ENST00000263121 CALCOCO2Q13137 446 aa23.62■■□□□ 1.37
SMARCB1-201ENST00000263121 CASP8Q14790 479 aa23.62■■□□□ 1.37
SMARCB1-201ENST00000263121 SLC45A4Q5BKX6 768 aa23.62■■□□□ 1.37
SMARCB1-201ENST00000263121 PIK3R6Q5UE93 754 aa23.62■■□□□ 1.37
SMARCB1-201ENST00000263121 B4GALNT4Q76KP1 1039 aa23.62■■□□□ 1.37
SMARCB1-201ENST00000263121 ATP6V0D2Q8N8Y2 350 aa23.62■■□□□ 1.37
SMARCB1-201ENST00000263121 QKIQ96PU8 341 aaKnown RBP eCLIP23.62■■□□□ 1.37
SMARCB1-201ENST00000263121 TGS1Q96RS0 853 aaKnown RBP23.62■■□□□ 1.37
SMARCB1-201ENST00000263121 FMO2Q99518 471 aa23.62■■□□□ 1.37
SMARCB1-201ENST00000263121 IL21Q9HBE4 155 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms