RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 ITIH2P19823 946 aa13.45□□□□□ -0.26
VAMP7-201ENST00000262640 STIP1P31948 543 aaKnown RBP13.45□□□□□ -0.26
VAMP7-201ENST00000262640 NRG1Q02297 640 aaPredicted RBP13.45□□□□□ -0.26
VAMP7-201ENST00000262640 GBE1Q04446 702 aa13.45□□□□□ -0.26
VAMP7-201ENST00000262640 RING1Q06587 406 aa13.45□□□□□ -0.26
VAMP7-201ENST00000262640 PAFAH1B3Q15102 231 aaKnown RBP13.45□□□□□ -0.26
VAMP7-201ENST00000262640 KLHDC10Q6PID8 442 aa13.45□□□□□ -0.26
VAMP7-201ENST00000262640 PDZD4Q76G19 769 aaPredicted RBP13.45□□□□□ -0.26
VAMP7-201ENST00000262640 CDKL3Q8IVW4 592 aaPredicted RBP13.45□□□□□ -0.26
VAMP7-201ENST00000262640 MRPL43Q8N983 215 aaKnown RBP13.45□□□□□ -0.26
VAMP7-201ENST00000262640 SAMD11Q96NU1 681 aa13.45□□□□□ -0.26
VAMP7-201ENST00000262640 FUT8Q9BYC5 575 aa13.45□□□□□ -0.26
VAMP7-201ENST00000262640 NEUROG2Q9H2A3 272 aa13.45□□□□□ -0.26
VAMP7-201ENST00000262640 ETNK2Q9NVF9 386 aa13.45□□□□□ -0.26
VAMP7-201ENST00000262640 SLC12A6Q9UHW9 1150 aa13.45□□□□□ -0.26
VAMP7-201ENST00000262640 DNMT3LQ9UJW3 386 aa13.45□□□□□ -0.26
VAMP7-201ENST00000262640 HBS1LQ9Y450 684 aaKnown RBP13.45□□□□□ -0.26
VAMP7-201ENST00000262640 RAD54BQ9Y620 910 aa13.45□□□□□ -0.26
VAMP7-201ENST00000262640 BCLAF3A2AJT9 711 aaKnown RBP13.44□□□□□ -0.26
VAMP7-201ENST00000262640 C2orf71A6NGG8 1288 aa13.44□□□□□ -0.26
VAMP7-201ENST00000262640 NDC80O14777 642 aa13.44□□□□□ -0.26
VAMP7-201ENST00000262640 LRIG2O94898 1065 aa13.44□□□□□ -0.26
VAMP7-201ENST00000262640 FAM153BP0C7A2 387 aa13.44□□□□□ -0.26
VAMP7-201ENST00000262640 IVDP26440 423 aa13.44□□□□□ -0.26
VAMP7-201ENST00000262640 ATP5C1P36542 298 aaKnown RBP13.44□□□□□ -0.26
VAMP7-201ENST00000262640 TUBP50607 506 aa13.44□□□□□ -0.26
VAMP7-201ENST00000262640 PLTPP55058 493 aa13.44□□□□□ -0.26
VAMP7-201ENST00000262640 CAV1Q03135 178 aa13.44□□□□□ -0.26
VAMP7-201ENST00000262640 MTA1Q13330 715 aa13.44□□□□□ -0.26
VAMP7-201ENST00000262640 FAM153CQ494X1 144 aa13.44□□□□□ -0.26
VAMP7-201ENST00000262640 HECTD3Q5T447 861 aa13.44□□□□□ -0.26
VAMP7-201ENST00000262640 PLPP4Q5VZY2 271 aa13.44□□□□□ -0.26
VAMP7-201ENST00000262640 ZDHHC24Q6UX98 284 aa13.44□□□□□ -0.26
VAMP7-201ENST00000262640 DNAJB7Q7Z6W7 309 aaPredicted RBP13.44□□□□□ -0.26
VAMP7-201ENST00000262640 MIB1Q86YT6 1006 aa13.44□□□□□ -0.26
VAMP7-201ENST00000262640 ATP6V0D2Q8N8Y2 350 aa13.44□□□□□ -0.26
VAMP7-201ENST00000262640 ART4Q93070 314 aa13.44□□□□□ -0.26
VAMP7-201ENST00000262640 C1orf74Q96LT6 269 aa13.44□□□□□ -0.26
VAMP7-201ENST00000262640 FMO2Q99518 471 aa13.44□□□□□ -0.26
VAMP7-201ENST00000262640 DTLQ9NZJ0 730 aa13.44□□□□□ -0.26
VAMP7-201ENST00000262640 FAM153AQ9UHL3 310 aa13.44□□□□□ -0.26
VAMP7-201ENST00000262640 SNX10Q9Y5X0 201 aa13.44□□□□□ -0.26
VAMP7-201ENST00000262640 ZNF638Q14966 1978 aaKnown RBP13.44□□□□□ -0.26
VAMP7-201ENST00000262640 PLXNA4Q9HCM2 1894 aa13.44□□□□□ -0.26
VAMP7-201ENST00000262640 SLC12A8A0AV02 714 aa13.44□□□□□ -0.26
VAMP7-201ENST00000262640 HACD1B0YJ81 288 aa13.44□□□□□ -0.26
VAMP7-201ENST00000262640 IFNB1P01574 187 aa13.44□□□□□ -0.26
VAMP7-201ENST00000262640 IGLV3-27P01718 113 aa13.44□□□□□ -0.26
VAMP7-201ENST00000262640 MYOGP15173 224 aa13.44□□□□□ -0.26
VAMP7-201ENST00000262640 ERCC2P18074 760 aa13.44□□□□□ -0.26
VAMP7-201ENST00000262640 SLC10A2Q12908 348 aaPredicted RBP13.44□□□□□ -0.26
VAMP7-201ENST00000262640 SHHQ15465 462 aa13.44□□□□□ -0.26
VAMP7-201ENST00000262640 ACBD5Q5T8D3 534 aaPredicted RBP13.44□□□□□ -0.26
VAMP7-201ENST00000262640 UNC45BQ8IWX7 931 aa13.44□□□□□ -0.26
VAMP7-201ENST00000262640 OLFM3Q96PB7 478 aa13.44□□□□□ -0.26
VAMP7-201ENST00000262640 SIK2Q9H0K1 926 aa13.44□□□□□ -0.26
VAMP7-201ENST00000262640 MTRF1LQ9UGC7 380 aaKnown RBP13.44□□□□□ -0.26
VAMP7-201ENST00000262640 MFHAS1Q9Y4C4 1052 aa13.44□□□□□ -0.26
VAMP7-201ENST00000262640 MFSD11O43934 449 aa13.43□□□□□ -0.26
VAMP7-201ENST00000262640 MOCS2O96007 188 aaPredicted RBP13.43□□□□□ -0.26
VAMP7-201ENST00000262640 GLUD1P00367 558 aa13.43□□□□□ -0.26
VAMP7-201ENST00000262640 SPATA31D3P0C874 917 aa13.43□□□□□ -0.26
VAMP7-201ENST00000262640 DNAJB1P25685 340 aa13.43□□□□□ -0.26
VAMP7-201ENST00000262640 EPHB2P29323 1055 aa13.43□□□□□ -0.26
VAMP7-201ENST00000262640 VPS41P49754 854 aa13.43□□□□□ -0.26
VAMP7-201ENST00000262640 CASP8Q14790 479 aa13.43□□□□□ -0.26
VAMP7-201ENST00000262640 SLC45A4Q5BKX6 768 aa13.43□□□□□ -0.26
VAMP7-201ENST00000262640 MANEALQ5VSG8 457 aa13.43□□□□□ -0.26
VAMP7-201ENST00000262640 SPATA31D4Q6ZUB0 917 aa13.43□□□□□ -0.26
VAMP7-201ENST00000262640 FAM71DQ8N9W8 422 aa13.43□□□□□ -0.26
VAMP7-201ENST00000262640 KREMEN2Q8NCW0 462 aa13.43□□□□□ -0.26
VAMP7-201ENST00000262640 FBXO25Q8TCJ0 367 aa13.43□□□□□ -0.26
VAMP7-201ENST00000262640 LRRC45Q96CN5 670 aa13.43□□□□□ -0.26
VAMP7-201ENST00000262640 BTN2A3PQ96KV6 586 aa13.43□□□□□ -0.26
VAMP7-201ENST00000262640 GDAP1L1Q96MZ0 367 aa13.43□□□□□ -0.26
VAMP7-201ENST00000262640 QKIQ96PU8 341 aaKnown RBP eCLIP13.43□□□□□ -0.26
VAMP7-201ENST00000262640 C10orf88Q9H8K7 445 aa13.43□□□□□ -0.26
VAMP7-201ENST00000262640 PCDHA11Q9Y5I1 949 aa13.43□□□□□ -0.26
VAMP7-201ENST00000262640 HIDE1A8MVS5 230 aa13.42□□□□□ -0.26
VAMP7-201ENST00000262640 GRXCR1A8MXD5 290 aa13.42□□□□□ -0.26
VAMP7-201ENST00000262640 MAP2K7O14733 419 aa13.42□□□□□ -0.26
VAMP7-201ENST00000262640 FGF10O15520 208 aaPredicted RBP13.42□□□□□ -0.26
VAMP7-201ENST00000262640 ZNF189O75820 626 aaPredicted RBP13.42□□□□□ -0.26
VAMP7-201ENST00000262640 ARHGEF15O94989 841 aa13.42□□□□□ -0.26
VAMP7-201ENST00000262640 LRG1P02750 347 aa13.42□□□□□ -0.26
VAMP7-201ENST00000262640 CA3P07451 260 aa13.42□□□□□ -0.26
VAMP7-201ENST00000262640 HOXC13P31276 330 aa13.42□□□□□ -0.26
VAMP7-201ENST00000262640 SERPINB6P35237 376 aa13.42□□□□□ -0.26
VAMP7-201ENST00000262640 GDF10P55107 478 aa13.42□□□□□ -0.26
VAMP7-201ENST00000262640 MLLT6P55198 1093 aaPredicted RBP13.42□□□□□ -0.26
VAMP7-201ENST00000262640 PDK1Q15118 436 aa13.42□□□□□ -0.26
VAMP7-201ENST00000262640 NUGGCQ68CJ6 796 aa13.42□□□□□ -0.26
VAMP7-201ENST00000262640 MREGQ8N565 214 aa13.42□□□□□ -0.26
VAMP7-201ENST00000262640 GLIS1Q8NBF1 620 aa13.42□□□□□ -0.26
VAMP7-201ENST00000262640 TBC1D31Q96DN5 1066 aa13.42□□□□□ -0.26
VAMP7-201ENST00000262640 RTP4Q96DX8 246 aa13.42□□□□□ -0.26
VAMP7-201ENST00000262640 TGS1Q96RS0 853 aaKnown RBP13.42□□□□□ -0.26
VAMP7-201ENST00000262640 NACA2Q9H009 215 aa13.42□□□□□ -0.26
VAMP7-201ENST00000262640 HS3ST4Q9Y661 456 aa13.42□□□□□ -0.26
VAMP7-201ENST00000262640 CCDC85CA6NKD9 419 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms