RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 PCNX2A6NKB5 2137 aa19.79■□□□□ 0.76
TM6SF1-201ENST00000258909 IGLV3-27P01718 113 aa19.79■□□□□ 0.76
TM6SF1-201ENST00000258909 CSRP1P21291 193 aaKnown RBP19.79■□□□□ 0.76
TM6SF1-201ENST00000258909 GPD2P43304 727 aa19.79■□□□□ 0.76
TM6SF1-201ENST00000258909 TPMTP51580 245 aa19.79■□□□□ 0.76
TM6SF1-201ENST00000258909 TBX4P57082 545 aa19.79■□□□□ 0.76
TM6SF1-201ENST00000258909 GJB7Q6PEY0 223 aa19.79■□□□□ 0.76
TM6SF1-201ENST00000258909 ADAM32Q8TC27 787 aa19.79■□□□□ 0.76
TM6SF1-201ENST00000258909 PRCCQ92733 491 aaPredicted RBP19.79■□□□□ 0.76
TM6SF1-201ENST00000258909 WSB2Q9NYS7 404 aaPredicted RBP19.79■□□□□ 0.76
TM6SF1-201ENST00000258909 USP36Q9P275 1121 aaKnown RBP19.79■□□□□ 0.76
TM6SF1-201ENST00000258909 NAALADL1Q9UQQ1 740 aa19.79■□□□□ 0.76
TM6SF1-201ENST00000258909 TIMM44O43615 452 aa19.78■□□□□ 0.76
TM6SF1-201ENST00000258909 TBL1XO60907 577 aa19.78■□□□□ 0.76
TM6SF1-201ENST00000258909 KRT37O76014 449 aa19.78■□□□□ 0.76
TM6SF1-201ENST00000258909 FBXO21O94952 628 aa19.78■□□□□ 0.76
TM6SF1-201ENST00000258909 LETM1O95202 739 aaPredicted RBP19.78■□□□□ 0.76
TM6SF1-201ENST00000258909 LATS1O95835 1130 aa19.78■□□□□ 0.76
TM6SF1-201ENST00000258909 CEACAM1P13688 526 aa19.78■□□□□ 0.76
TM6SF1-201ENST00000258909 CD70P32970 193 aa19.78■□□□□ 0.76
TM6SF1-201ENST00000258909 APBA1Q02410 837 aa19.78■□□□□ 0.76
TM6SF1-201ENST00000258909 FOXC1Q12948 553 aa19.78■□□□□ 0.76
TM6SF1-201ENST00000258909 FNDC3BQ53EP0 1204 aaKnown RBP19.78■□□□□ 0.76
TM6SF1-201ENST00000258909 FAM133BQ5BKY9 247 aaKnown RBP19.78■□□□□ 0.76
TM6SF1-201ENST00000258909 PIK3R6Q5UE93 754 aa19.78■□□□□ 0.76
TM6SF1-201ENST00000258909 NADSYN1Q6IA69 706 aa19.78■□□□□ 0.76
TM6SF1-201ENST00000258909 METTL3Q86U44 580 aaKnown RBP19.78■□□□□ 0.76
TM6SF1-201ENST00000258909 ADIPOR2Q86V24 386 aa19.78■□□□□ 0.76
TM6SF1-201ENST00000258909 UNC45BQ8IWX7 931 aa19.78■□□□□ 0.76
TM6SF1-201ENST00000258909 DQX1Q8TE96 717 aaKnown RBP19.78■□□□□ 0.76
TM6SF1-201ENST00000258909 FAM149B1Q96BN6 582 aa19.78■□□□□ 0.76
TM6SF1-201ENST00000258909 STIM2Q9P246 746 aa19.78■□□□□ 0.76
TM6SF1-201ENST00000258909 GGA2Q9UJY4 613 aa19.78■□□□□ 0.76
TM6SF1-201ENST00000258909 CNTN6Q9UQ52 1028 aa19.78■□□□□ 0.76
TM6SF1-201ENST00000258909 NUMA1Q14980 2115 aa19.78■□□□□ 0.76
TM6SF1-201ENST00000258909 ACSL4O60488 711 aa19.77■□□□□ 0.76
TM6SF1-201ENST00000258909 TOP3BO95985 862 aaKnown RBP19.77■□□□□ 0.76
TM6SF1-201ENST00000258909 PABPC1P11940 636 aaKnown RBP19.77■□□□□ 0.76
TM6SF1-201ENST00000258909 SPINK2P20155 84 aa19.77■□□□□ 0.76
TM6SF1-201ENST00000258909 SLC11A2P49281 568 aa19.77■□□□□ 0.76
TM6SF1-201ENST00000258909 ZNF445P59923 1031 aa19.77■□□□□ 0.76
TM6SF1-201ENST00000258909 SHC2P98077 582 aa19.77■□□□□ 0.76
TM6SF1-201ENST00000258909 PLEKHG6Q3KR16 790 aa19.77■□□□□ 0.76
TM6SF1-201ENST00000258909 SYCP2LQ5T4T6 812 aa19.77■□□□□ 0.76
TM6SF1-201ENST00000258909 NUGGCQ68CJ6 796 aa19.77■□□□□ 0.76
TM6SF1-201ENST00000258909 FAM124AQ86V42 546 aa19.77■□□□□ 0.76
TM6SF1-201ENST00000258909 MINDY1Q8N5J2 469 aa19.77■□□□□ 0.76
TM6SF1-201ENST00000258909 MYEOVQ96EZ4 313 aa19.77■□□□□ 0.76
TM6SF1-201ENST00000258909 MED15Q96RN5 788 aa19.77■□□□□ 0.76
TM6SF1-201ENST00000258909 KIAA1468Q9P260 1216 aa19.77■□□□□ 0.76
TM6SF1-201ENST00000258909 CYTH4Q9UIA0 394 aa19.77■□□□□ 0.76
TM6SF1-201ENST00000258909 PLA2G4CQ9UP65 541 aa19.77■□□□□ 0.76
TM6SF1-201ENST00000258909 MEI4A8MW99 385 aa19.76■□□□□ 0.75
TM6SF1-201ENST00000258909 ARHGAP33O14559 1287 aa19.76■□□□□ 0.75
TM6SF1-201ENST00000258909 FGFR1OPO95684 399 aaKnown RBP19.76■□□□□ 0.75
TM6SF1-201ENST00000258909 ACADMP11310 421 aa19.76■□□□□ 0.75
TM6SF1-201ENST00000258909 SLC9A1P19634 815 aa19.76■□□□□ 0.75
TM6SF1-201ENST00000258909 ST3GAL2Q16842 350 aa19.76■□□□□ 0.75
TM6SF1-201ENST00000258909 PTPRNQ16849 979 aa19.76■□□□□ 0.75
TM6SF1-201ENST00000258909 SYPL2Q5VXT5 272 aa19.76■□□□□ 0.75
TM6SF1-201ENST00000258909 MBLAC2Q68D91 279 aa19.76■□□□□ 0.75
TM6SF1-201ENST00000258909 AHI1Q8N157 1196 aa19.76■□□□□ 0.75
TM6SF1-201ENST00000258909 HDDC3Q8N4P3 179 aa19.76■□□□□ 0.75
TM6SF1-201ENST00000258909 WFIKKN2Q8TEU8 576 aa19.76■□□□□ 0.75
TM6SF1-201ENST00000258909 FOXJ1Q92949 421 aa19.76■□□□□ 0.75
TM6SF1-201ENST00000258909 FCRL2Q96LA5 508 aaPredicted RBP19.76■□□□□ 0.75
TM6SF1-201ENST00000258909 AKAP13Q12802 2813 aa19.76■□□□□ 0.75
TM6SF1-201ENST00000258909 MUC22E2RYF6 1773 aaPredicted RBP19.76■□□□□ 0.75
TM6SF1-201ENST00000258909 THAP12O43422 761 aa19.75■□□□□ 0.75
TM6SF1-201ENST00000258909 MOCS2O96007 188 aaPredicted RBP19.75■□□□□ 0.75
TM6SF1-201ENST00000258909 USP8P40818 1118 aa19.75■□□□□ 0.75
TM6SF1-201ENST00000258909 RPL34P49207 117 aaKnown RBP19.75■□□□□ 0.75
TM6SF1-201ENST00000258909 RING1Q06587 406 aa19.75■□□□□ 0.75
TM6SF1-201ENST00000258909 E2F5Q15329 346 aa19.75■□□□□ 0.75
TM6SF1-201ENST00000258909 ARHGAP44Q17R89 818 aa19.75■□□□□ 0.75
TM6SF1-201ENST00000258909 WDR45BQ5MNZ6 344 aa19.75■□□□□ 0.75
TM6SF1-201ENST00000258909 RABEPKQ7Z6M1 372 aa19.75■□□□□ 0.75
TM6SF1-201ENST00000258909 KIAA0907Q7Z7F0 614 aaPredicted RBP19.75■□□□□ 0.75
TM6SF1-201ENST00000258909 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.75■□□□□ 0.75
TM6SF1-201ENST00000258909 OR2T3Q8NH03 318 aa19.75■□□□□ 0.75
TM6SF1-201ENST00000258909 ZNF606Q8WXB4 792 aa19.75■□□□□ 0.75
TM6SF1-201ENST00000258909 PRICKLE1Q96MT3 831 aaPredicted RBP19.75■□□□□ 0.75
TM6SF1-201ENST00000258909 MIR1-1HGQ9H1L0 117 aa19.75■□□□□ 0.75
TM6SF1-201ENST00000258909 TMEM245Q9H330 911 aa19.75■□□□□ 0.75
TM6SF1-201ENST00000258909 RWDD2AQ9UIY3 292 aa19.75■□□□□ 0.75
TM6SF1-201ENST00000258909 SPAARA0A1B0GVQ0 90 aa19.74■□□□□ 0.75
TM6SF1-201ENST00000258909 E5RJQ4 531 aa19.74■□□□□ 0.75
TM6SF1-201ENST00000258909 PAPSS1O43252 624 aaPredicted RBP19.74■□□□□ 0.75
TM6SF1-201ENST00000258909 GNA15P30679 374 aa19.74■□□□□ 0.75
TM6SF1-201ENST00000258909 UBE2HP62256 183 aa19.74■□□□□ 0.75
TM6SF1-201ENST00000258909 RPS24P62847 133 aaKnown RBP19.74■□□□□ 0.75
TM6SF1-201ENST00000258909 SEMA3BQ13214 749 aa19.74■□□□□ 0.75
TM6SF1-201ENST00000258909 CAMK2GQ13555 558 aaPredicted RBP19.74■□□□□ 0.75
TM6SF1-201ENST00000258909 TRIM65Q6PJ69 517 aa19.74■□□□□ 0.75
TM6SF1-201ENST00000258909 TAC4Q86UU9 113 aa19.74■□□□□ 0.75
TM6SF1-201ENST00000258909 MFN1Q8IWA4 741 aa19.74■□□□□ 0.75
TM6SF1-201ENST00000258909 CFAP52Q8N1V2 620 aa19.74■□□□□ 0.75
TM6SF1-201ENST00000258909 ZCCHC9Q8N567 271 aaKnown RBP19.74■□□□□ 0.75
TM6SF1-201ENST00000258909 SERPINB11Q96P15 392 aa19.74■□□□□ 0.75
TM6SF1-201ENST00000258909 SLC4A5Q9BY07 1137 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms