RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 MAN1C1Q9NR34 630 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 WDR35Q9P2L0 1181 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 PCDHGC3Q9UN70 934 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 GOLGA8QA0A0J9YX86 632 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 GOLGA8OA6NCC3 632 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 GOLGA8NF8WBI6 632 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 I6L893 689 aaPredicted RBP9.38□□□□□ -0.91
CKAP2-201ENST00000258607 CSH1P0DML2 217 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 CSH2P0DML3 217 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 ABCD1P33897 745 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 PHBP35232 272 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 YWHAHQ04917 246 aaPredicted RBP9.38□□□□□ -0.91
CKAP2-201ENST00000258607 GLB1LQ6UWU2 654 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 METTL23Q86XA0 190 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 ARID3BQ8IVW6 561 aaPredicted RBP9.38□□□□□ -0.91
CKAP2-201ENST00000258607 POU5F2Q8N7G0 328 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 CAPNS2Q96L46 248 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 ZCWPW1Q9H0M4 648 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 STMN4Q9H169 189 aaPredicted RBP9.38□□□□□ -0.91
CKAP2-201ENST00000258607 CYP3A43Q9HB55 503 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 ARHGEF4Q9NR80 690 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 PSD3Q9NYI0 1048 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 MORF4L1Q9UBU8 362 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 PHTF1Q9UMS5 762 aa9.38□□□□□ -0.91
CKAP2-201ENST00000258607 MGAMO43451 1857 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 ZBBXA8MT70 800 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 DDHD2O94830 711 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 LTFP02788 710 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 L1CAMP32004 1257 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 CCR10P46092 362 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 ALDH18A1P54886 795 aaKnown RBP9.37□□□□□ -0.91
CKAP2-201ENST00000258607 HADHBP55084 474 aaKnown RBP9.37□□□□□ -0.91
CKAP2-201ENST00000258607 DUSP4Q13115 394 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 CTBP1Q13363 440 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 ANKRD20A2Q5SQ80 823 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 C10orf120Q5SQS8 335 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 PPP1R15BQ5SWA1 713 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 ANKRD20A1Q5TYW2 823 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 ANKRD20A3Q5VUR7 823 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 C17orf99Q6UX52 265 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 C16orf59Q7L2K0 433 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 SPATA21Q7Z572 469 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 TMEM173Q86WV6 379 aaPredicted RBP9.37□□□□□ -0.91
CKAP2-201ENST00000258607 NPWQ8N729 165 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 OR6P1Q8NGX9 317 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 CXorf38Q8TB03 319 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 SLC35B2Q8TB61 432 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 DTX3LQ8TDB6 740 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 TFB1MQ8WVM0 346 aaKnown RBP9.37□□□□□ -0.91
CKAP2-201ENST00000258607 MARK4Q96L34 752 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 OMDQ99983 421 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 NSRP1Q9H0G5 558 aaKnown RBP9.37□□□□□ -0.91
CKAP2-201ENST00000258607 CYP4F12Q9HCS2 524 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 ZFATQ9P243 1243 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 STAP1Q9ULZ2 295 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 TRPV2Q9Y5S1 764 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 NUMA1Q14980 2115 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 C3orf70A6NLC5 250 aaPredicted RBP9.37□□□□□ -0.91
CKAP2-201ENST00000258607 GJA1P17302 382 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 NFKB1P19838 968 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 ATICP31939 592 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 CSE1LP55060 971 aaKnown RBP9.37□□□□□ -0.91
CKAP2-201ENST00000258607 GEMIN4P57678 1058 aaKnown RBP9.37□□□□□ -0.91
CKAP2-201ENST00000258607 MRPS5P82675 430 aaKnown RBP9.37□□□□□ -0.91
CKAP2-201ENST00000258607 CYP1B1Q16678 543 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 BOLA3Q53S33 107 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 AGBL2Q5U5Z8 902 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 TRIM68Q6AZZ1 485 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 MTDHQ86UE4 582 aaKnown RBP9.37□□□□□ -0.91
CKAP2-201ENST00000258607 AGGF1Q8N302 714 aaeCLIP9.37□□□□□ -0.914e-21■□□□□ 10
CKAP2-201ENST00000258607 GSTCDQ8NEC7 633 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 HTR3CQ8WXA8 447 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 RNF208Q9H0X6 261 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 ECT2Q9H8V3 914 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 CHRAC1Q9NRG0 131 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 SYBUQ9NX95 663 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 GTF2IRD1Q9UHL9 959 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 RBBP6Q7Z6E9 1792 aaKnown RBP9.37□□□□□ -0.91
CKAP2-201ENST00000258607 BPTFQ12830 3046 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 FAM237BA0A1B0GVD1 139 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 TBKBP1A7MCY6 615 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 ZBTB24O43167 697 aaPredicted RBP9.37□□□□□ -0.91
CKAP2-201ENST00000258607 DGKIO75912 1065 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 LRIG2O94898 1065 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 WEE1P30291 646 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 CYP2C18P33260 490 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 MSX2P35548 267 aaPredicted RBP9.37□□□□□ -0.91
CKAP2-201ENST00000258607 CORO7P57737 925 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 SKOR1P84550 965 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 VWA5B1Q5TIE3 1220 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 NXNQ6DKJ4 435 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 PAQR9Q6ZVX9 377 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 TAC4Q86UU9 113 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 CACUL1Q86Y37 369 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 CCNYL1Q8N7R7 359 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 UBR7Q8N806 425 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 RFWD2Q8NHY2 731 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 ATXN2LQ8WWM7 1075 aaKnown RBP9.37□□□□□ -0.91
CKAP2-201ENST00000258607 RSPH1Q8WYR4 309 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 ZNF512Q96ME7 567 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms