RNA–Protein interactions for RNA: ENST00000255266.9

PDE6A-201, Transcript of phosphodiesterase 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6A, Length 5,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-201ENST00000255266 MYRIPQ8NFW9 859 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 CASS4Q9NQ75 786 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 MAN1C1Q9NR34 630 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 NDRG2Q9UN36 371 aaKnown RBP9.45□□□□□ -0.9
PDE6A-201ENST00000255266 CCDC78A2IDD5 438 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 MAN2B1O00754 1011 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 CD44P16070 742 aaKnown RBP9.45□□□□□ -0.9
PDE6A-201ENST00000255266 NPY2RP49146 381 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 ANXA11P50995 505 aaKnown RBP9.45□□□□□ -0.9
PDE6A-201ENST00000255266 HTRA3P83110 453 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 SLC20A2Q08357 652 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 ARID5BQ14865 1188 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 CST9Q5W186 159 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 ANKS6Q68DC2 871 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 ANGPTL8Q6UXH0 198 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 TFAP2DQ7Z6R9 452 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 TPCN2Q8NHX9 752 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 ARHGEF2Q92974 986 aaKnown RBP9.45□□□□□ -0.9
PDE6A-201ENST00000255266 CARD9Q9H257 536 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 ECT2Q9H8V3 914 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 SYTL2Q9HCH5 934 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 OGFRQ9NZT2 677 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 FBXL5Q9UKA1 691 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 ADGRA3Q8IWK6 1321 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 FAM237AA0A1B0GTK4 181 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 GOLGA8TH3BQL2 631 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 SUN1O94901 812 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 HOXB8P17481 243 aaPredicted RBP9.45□□□□□ -0.9
PDE6A-201ENST00000255266 TRMT10CQ7L0Y3 403 aaKnown RBP9.45□□□□□ -0.9
PDE6A-201ENST00000255266 PSD3Q9NYI0 1048 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 FAM153AQ9UHL3 310 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 TKTP29401 623 aaKnown RBP9.45□□□□□ -0.9
PDE6A-201ENST00000255266 CAP1Q01518 475 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 TAF10Q12962 218 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 LPIN1Q14693 890 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 PKN3Q6P5Z2 889 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 CACNA2D3Q8IZS8 1091 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 TSTD1Q8NFU3 115 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 TMEM159Q96B96 161 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 ARL8AQ96BM9 186 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 MRPL45Q9BRJ2 306 aaKnown RBP9.45□□□□□ -0.9
PDE6A-201ENST00000255266 LHX5Q9H2C1 402 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 A0A088AWK7 358 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 SYCE1LA8MT33 242 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 PDZK1P1A8MUH7 402 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 ZNF10P21506 573 aaPredicted RBP9.45□□□□□ -0.9
PDE6A-201ENST00000255266 CHST9Q7L1S5 443 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 SH3RF1Q7Z6J0 888 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 POF1BQ8WVV4 589 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 IRF7Q92985 503 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 HERC2P3Q9BVR0 1158 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 BCO2Q9BYV7 579 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 SLC39A8Q9C0K1 460 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 RABEP2Q9H5N1 569 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 PYCARDQ9ULZ3 195 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 ITM2BQ9Y287 266 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 ORC6Q9Y5N6 252 aa9.45□□□□□ -0.9
PDE6A-201ENST00000255266 GCKP35557 465 aa9.44□□□□□ -0.9
PDE6A-201ENST00000255266 MAPK9P45984 424 aa9.44□□□□□ -0.9
PDE6A-201ENST00000255266 SUZ12Q15022 739 aaKnown RBP9.44□□□□□ -0.9
PDE6A-201ENST00000255266 MAPRE2Q15555 327 aa9.44□□□□□ -0.9
PDE6A-201ENST00000255266 SPDYE7PQ495Y7 208 aa9.44□□□□□ -0.9
PDE6A-201ENST00000255266 ANKS1BQ7Z6G8 1248 aa9.44□□□□□ -0.9
PDE6A-201ENST00000255266 FAM71DQ8N9W8 422 aa9.44□□□□□ -0.9
PDE6A-201ENST00000255266 WWOXQ9NZC7 414 aa9.44□□□□□ -0.9
PDE6A-201ENST00000255266 CPSF2Q9P2I0 782 aaKnown RBP9.44□□□□□ -0.9
PDE6A-201ENST00000255266 GMEB2Q9UKD1 530 aa9.44□□□□□ -0.9
PDE6A-201ENST00000255266 SDR42E2A6NKP2 422 aa9.44□□□□□ -0.9
PDE6A-201ENST00000255266 ENDOD1O94919 500 aa9.44□□□□□ -0.9
PDE6A-201ENST00000255266 IL1BP01584 269 aa9.44□□□□□ -0.9
PDE6A-201ENST00000255266 JCHAINP01591 159 aa9.44□□□□□ -0.9
PDE6A-201ENST00000255266 PBLDP30039 288 aaPredicted RBP9.44□□□□□ -0.9
PDE6A-201ENST00000255266 TP53BP2Q13625 1128 aa9.44□□□□□ -0.9
PDE6A-201ENST00000255266 RD3Q7Z3Z2 195 aa9.44□□□□□ -0.9
PDE6A-201ENST00000255266 RNF135Q8IUD6 432 aa9.44□□□□□ -0.9
PDE6A-201ENST00000255266 HDDC3Q8N4P3 179 aa9.44□□□□□ -0.9
PDE6A-201ENST00000255266 NDEL1Q9GZM8 345 aa9.44□□□□□ -0.9
PDE6A-201ENST00000255266 CNTN3Q9P232 1028 aa9.44□□□□□ -0.9
PDE6A-201ENST00000255266 TSR3Q9UJK0 312 aaKnown RBP9.44□□□□□ -0.9
PDE6A-201ENST00000255266 SNX12Q9UMY4 172 aa9.44□□□□□ -0.9
PDE6A-201ENST00000255266 USH1CQ9Y6N9 552 aa9.44□□□□□ -0.9
PDE6A-201ENST00000255266 ENPP3O14638 875 aa9.44□□□□□ -0.9
PDE6A-201ENST00000255266 CNMDO75829 334 aa9.44□□□□□ -0.9
PDE6A-201ENST00000255266 ATG7O95352 703 aa9.44□□□□□ -0.9
PDE6A-201ENST00000255266 BMP10O95393 424 aa9.44□□□□□ -0.9
PDE6A-201ENST00000255266 PIGRP01833 764 aa9.44□□□□□ -0.9
PDE6A-201ENST00000255266 EDNRBP24530 442 aa9.44□□□□□ -0.9
PDE6A-201ENST00000255266 MZF1P28698 734 aaPredicted RBP9.44□□□□□ -0.9
PDE6A-201ENST00000255266 KLK7P49862 253 aa9.44□□□□□ -0.9
PDE6A-201ENST00000255266 ZNF143P52747 638 aaPredicted RBP9.44□□□□□ -0.9
PDE6A-201ENST00000255266 MKRN4PQ13434 485 aaPredicted RBP9.44□□□□□ -0.9
PDE6A-201ENST00000255266 ZC3H12AQ5D1E8 599 aaKnown RBP9.44□□□□□ -0.9
PDE6A-201ENST00000255266 CDKAL1Q5VV42 579 aa9.44□□□□□ -0.9
PDE6A-201ENST00000255266 CYB5D1Q6P9G0 228 aa9.44□□□□□ -0.9
PDE6A-201ENST00000255266 FAM183BPQ6ZVS7 135 aa9.44□□□□□ -0.9
PDE6A-201ENST00000255266 FAM9CQ8IZT9 166 aa9.44□□□□□ -0.9
PDE6A-201ENST00000255266 C17orf53Q8N3J3 647 aaPredicted RBP9.44□□□□□ -0.9
PDE6A-201ENST00000255266 OVCA2Q8WZ82 227 aa9.44□□□□□ -0.9
PDE6A-201ENST00000255266 FBXL18Q96ME1 805 aa9.44□□□□□ -0.9
PDE6A-201ENST00000255266 GPATCH2LQ9NWQ4 482 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms