RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 LRRC53A6NM62 1247 aa26.02■■□□□ 1.76
LSM7-201ENST00000252622 KCNU1A8MYU2 1149 aa26.02■■□□□ 1.76
LSM7-201ENST00000252622 SGK1O00141 431 aa26.02■■□□□ 1.76
LSM7-201ENST00000252622 PBX1P40424 430 aa26.02■■□□□ 1.76
LSM7-201ENST00000252622 NSFP46459 744 aaKnown RBP26.02■■□□□ 1.76
LSM7-201ENST00000252622 SGSHP51688 502 aa26.02■■□□□ 1.76
LSM7-201ENST00000252622 DGKEP52429 567 aa26.02■■□□□ 1.76
LSM7-201ENST00000252622 MTA1Q13330 715 aa26.02■■□□□ 1.76
LSM7-201ENST00000252622 MS4A13Q5J8X5 152 aa26.02■■□□□ 1.76
LSM7-201ENST00000252622 LRSAM1Q6UWE0 723 aa26.02■■□□□ 1.76
LSM7-201ENST00000252622 IRF2BP2Q7Z5L9 587 aa26.02■■□□□ 1.76
LSM7-201ENST00000252622 ATP6V0D2Q8N8Y2 350 aa26.02■■□□□ 1.76
LSM7-201ENST00000252622 TSTD1Q8NFU3 115 aa26.02■■□□□ 1.76
LSM7-201ENST00000252622 PGAP3Q96FM1 320 aaPredicted RBP26.02■■□□□ 1.76
LSM7-201ENST00000252622 C11orf70Q9BRQ4 267 aa26.02■■□□□ 1.76
LSM7-201ENST00000252622 NUCKS1Q9H1E3 243 aaKnown RBP26.02■■□□□ 1.76
LSM7-201ENST00000252622 TSPY26PQ9H489 355 aa26.02■■□□□ 1.76
LSM7-201ENST00000252622 EBF1Q9UH73 591 aa26.02■■□□□ 1.76
LSM7-201ENST00000252622 SLC12A6Q9UHW9 1150 aa26.02■■□□□ 1.76
LSM7-201ENST00000252622 XPO7Q9UIA9 1087 aaKnown RBP26.02■■□□□ 1.76
LSM7-201ENST00000252622 TMEM59LQ9UK28 342 aa26.02■■□□□ 1.76
LSM7-201ENST00000252622 VPS13AQ96RL7 3174 aa26.02■■□□□ 1.76
LSM7-201ENST00000252622 SYNJ2BP-COX16A0A087WUM0 186 aa26.01■■□□□ 1.75
LSM7-201ENST00000252622 FAM170AA1A519 330 aa26.01■■□□□ 1.75
LSM7-201ENST00000252622 TYW5A2RUC4 315 aaKnown RBP26.01■■□□□ 1.75
LSM7-201ENST00000252622 GOLGA8SH3BPF8 625 aa26.01■■□□□ 1.75
LSM7-201ENST00000252622 M0QYT0 321 aa26.01■■□□□ 1.75
LSM7-201ENST00000252622 ADAM23O75077 832 aa26.01■■□□□ 1.75
LSM7-201ENST00000252622 GSCP56915 257 aaPredicted RBP26.01■■□□□ 1.75
LSM7-201ENST00000252622 RNASE9P60153 205 aaKnown RBP26.01■■□□□ 1.75
LSM7-201ENST00000252622 EIF4HQ15056 248 aaKnown RBP26.01■■□□□ 1.75
LSM7-201ENST00000252622 GEN1Q17RS7 908 aa26.01■■□□□ 1.75
LSM7-201ENST00000252622 EGFLAMQ63HQ2 1017 aa26.01■■□□□ 1.75
LSM7-201ENST00000252622 PHF13Q86YI8 300 aaPredicted RBP26.01■■□□□ 1.75
LSM7-201ENST00000252622 ZNF557Q8N988 423 aaPredicted RBP26.01■■□□□ 1.75
LSM7-201ENST00000252622 SUMF1Q8NBK3 374 aa26.01■■□□□ 1.75
LSM7-201ENST00000252622 SLC30A5Q8TAD4 765 aa26.01■■□□□ 1.75
LSM7-201ENST00000252622 SYT11Q9BT88 431 aa26.01■■□□□ 1.75
LSM7-201ENST00000252622 ZDHHC4Q9NPG8 344 aa26.01■■□□□ 1.75
LSM7-201ENST00000252622 COX16Q9P0S2 106 aa26.01■■□□□ 1.75
LSM7-201ENST00000252622 TBL1XO60907 577 aa26■■□□□ 1.75
LSM7-201ENST00000252622 HNRNPLP14866 589 aaKnown RBP eCLIP26■■□□□ 1.751e-8■■■■□ 22.4
LSM7-201ENST00000252622 ABCB4P21439 1286 aa26■■□□□ 1.75
LSM7-201ENST00000252622 FLT3P36888 993 aa26■■□□□ 1.75
LSM7-201ENST00000252622 PXNP49023 591 aaPredicted RBP26■■□□□ 1.75
LSM7-201ENST00000252622 SULT1E1P49888 294 aa26■■□□□ 1.75
LSM7-201ENST00000252622 PTP4A2Q12974 167 aa26■■□□□ 1.75
LSM7-201ENST00000252622 ASIC2Q16515 512 aa26■■□□□ 1.75
LSM7-201ENST00000252622 TMEM92Q6UXU6 159 aa26■■□□□ 1.75
LSM7-201ENST00000252622 DDX51Q8N8A6 666 aaKnown RBP eCLIP26■■□□□ 1.75
LSM7-201ENST00000252622 RNF34Q969K3 372 aa26■■□□□ 1.75
LSM7-201ENST00000252622 NUP58Q9BVL2 599 aa26■■□□□ 1.75
LSM7-201ENST00000252622 SEPT11Q9NVA2 429 aaKnown RBP26■■□□□ 1.75
LSM7-201ENST00000252622 AIPL1Q9NZN9 384 aa26■■□□□ 1.75
LSM7-201ENST00000252622 CALCOCO1Q9P1Z2 691 aa26■■□□□ 1.75
LSM7-201ENST00000252622 AXIN1O15169 862 aa25.99■■□□□ 1.75
LSM7-201ENST00000252622 TACR2P21452 398 aa25.99■■□□□ 1.75
LSM7-201ENST00000252622 HLA-FP30511 346 aa25.99■■□□□ 1.75
LSM7-201ENST00000252622 NTSR1P30989 418 aa25.99■■□□□ 1.75
LSM7-201ENST00000252622 NME3Q13232 169 aa25.99■■□□□ 1.75
LSM7-201ENST00000252622 SLC25A52Q3SY17 297 aa25.99■■□□□ 1.75
LSM7-201ENST00000252622 RAP1GAP2Q684P5 730 aa25.99■■□□□ 1.75
LSM7-201ENST00000252622 RASSF3Q86WH2 238 aa25.99■■□□□ 1.75
LSM7-201ENST00000252622 CHSY1Q86X52 802 aa25.99■■□□□ 1.75
LSM7-201ENST00000252622 WFIKKN2Q8TEU8 576 aa25.99■■□□□ 1.75
LSM7-201ENST00000252622 UCMAQ8WVF2 138 aa25.99■■□□□ 1.75
LSM7-201ENST00000252622 IQCDQ96DY2 449 aa25.99■■□□□ 1.75
LSM7-201ENST00000252622 ADAM33Q9BZ11 813 aa25.99■■□□□ 1.75
LSM7-201ENST00000252622 POLMQ9NP87 494 aaPredicted RBP25.99■■□□□ 1.75
LSM7-201ENST00000252622 METTL5Q9NRN9 209 aaKnown RBP25.99■■□□□ 1.75
LSM7-201ENST00000252622 ADAM22Q9P0K1 906 aa25.99■■□□□ 1.75
LSM7-201ENST00000252622 ZFHX2Q9C0A1 2572 aaPredicted RBP25.98■■□□□ 1.75
LSM7-201ENST00000252622 A0A1W2PQJ5 194 aa25.98■■□□□ 1.75
LSM7-201ENST00000252622 NPC1O15118 1278 aa25.98■■□□□ 1.75
LSM7-201ENST00000252622 HRO43593 1189 aa25.98■■□□□ 1.75
LSM7-201ENST00000252622 F9P00740 461 aa25.98■■□□□ 1.75
LSM7-201ENST00000252622 CALB1P05937 261 aa25.98■■□□□ 1.75
LSM7-201ENST00000252622 PRKCIP41743 596 aa25.98■■□□□ 1.75
LSM7-201ENST00000252622 CXCR3P49682 368 aa25.98■■□□□ 1.75
LSM7-201ENST00000252622 RPS24P62847 133 aaKnown RBP25.98■■□□□ 1.75
LSM7-201ENST00000252622 E2F5Q15329 346 aa25.98■■□□□ 1.75
LSM7-201ENST00000252622 SFMBT2Q5VUG0 894 aa25.98■■□□□ 1.75
LSM7-201ENST00000252622 TRNP1Q6NT89 227 aa25.98■■□□□ 1.75
LSM7-201ENST00000252622 KIAA0907Q7Z7F0 614 aaPredicted RBP25.98■■□□□ 1.75
LSM7-201ENST00000252622 CHPFQ8IZ52 775 aa25.98■■□□□ 1.75
LSM7-201ENST00000252622 OLIG1Q8TAK6 271 aa25.98■■□□□ 1.75
LSM7-201ENST00000252622 MYEOVQ96EZ4 313 aa25.98■■□□□ 1.75
LSM7-201ENST00000252622 TBCBQ99426 244 aa25.98■■□□□ 1.75
LSM7-201ENST00000252622 PRMT1Q99873 361 aaKnown RBP25.98■■□□□ 1.75
LSM7-201ENST00000252622 GABRG3Q99928 467 aa25.98■■□□□ 1.75
LSM7-201ENST00000252622 PIGVQ9NUD9 493 aa25.98■■□□□ 1.75
LSM7-201ENST00000252622 IFNKQ9P0W0 207 aa25.98■■□□□ 1.75
LSM7-201ENST00000252622 SMG5Q9UPR3 1016 aaKnown RBP25.98■■□□□ 1.75
LSM7-201ENST00000252622 PAXBP1Q9Y5B6 917 aa25.98■■□□□ 1.75
LSM7-201ENST00000252622 F5H5T6 163 aa25.97■■□□□ 1.75
LSM7-201ENST00000252622 TIMM44O43615 452 aa25.97■■□□□ 1.75
LSM7-201ENST00000252622 ALDH1A2O94788 518 aa25.97■■□□□ 1.75
LSM7-201ENST00000252622 HOXB2P14652 356 aa25.97■■□□□ 1.75
LSM7-201ENST00000252622 TFE3P19532 575 aaPredicted RBP25.97■■□□□ 1.75
LSM7-201ENST00000252622 C1QBPQ07021 282 aaKnown RBP25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms