RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 EIF4HQ15056 248 aaKnown RBP25.25■■□□□ 1.63
SDF2L1-201ENST00000248958 ASIC2Q16515 512 aa25.25■■□□□ 1.63
SDF2L1-201ENST00000248958 CRY1Q16526 586 aa25.25■■□□□ 1.63
SDF2L1-201ENST00000248958 EMC10Q5UCC4 262 aa25.25■■□□□ 1.63
SDF2L1-201ENST00000248958 SFMBT2Q5VUG0 894 aa25.25■■□□□ 1.63
SDF2L1-201ENST00000248958 SDE2Q6IQ49 451 aa25.25■■□□□ 1.63
SDF2L1-201ENST00000248958 MMS22LQ6ZRQ5 1243 aa25.25■■□□□ 1.63
SDF2L1-201ENST00000248958 SND1Q7KZF4 910 aaKnown RBP eCLIP25.25■■□□□ 1.631e-9■■■■■ 28.3
SDF2L1-201ENST00000248958 ANKS1BQ7Z6G8 1248 aa25.25■■□□□ 1.63
SDF2L1-201ENST00000248958 PHF13Q86YI8 300 aaPredicted RBP25.25■■□□□ 1.63
SDF2L1-201ENST00000248958 CCDC33Q8N5R6 958 aa25.25■■□□□ 1.63
SDF2L1-201ENST00000248958 ALLCQ8N6M5 410 aa25.25■■□□□ 1.63
SDF2L1-201ENST00000248958 TXNDC5Q8NBS9 432 aaKnown RBP25.25■■□□□ 1.63
SDF2L1-201ENST00000248958 HJURPQ8NCD3 748 aaPredicted RBP25.25■■□□□ 1.63
SDF2L1-201ENST00000248958 NT5C3BQ969T7 300 aa25.25■■□□□ 1.63
SDF2L1-201ENST00000248958 NUCKS1Q9H1E3 243 aaKnown RBP25.25■■□□□ 1.63
SDF2L1-201ENST00000248958 TMEM59LQ9UK28 342 aa25.25■■□□□ 1.63
SDF2L1-201ENST00000248958 MYO18AQ92614 2054 aaKnown RBP25.24■■□□□ 1.63
SDF2L1-201ENST00000248958 A0A1W2PQJ5 194 aa25.24■■□□□ 1.63
SDF2L1-201ENST00000248958 PRRT4C9JH25 899 aa25.24■■□□□ 1.63
SDF2L1-201ENST00000248958 GOLGA8SH3BPF8 625 aa25.24■■□□□ 1.63
SDF2L1-201ENST00000248958 TIMM44O43615 452 aa25.24■■□□□ 1.63
SDF2L1-201ENST00000248958 LMNAP02545 664 aaKnown RBP25.24■■□□□ 1.63
SDF2L1-201ENST00000248958 TNFAIP3P21580 790 aa25.24■■□□□ 1.63
SDF2L1-201ENST00000248958 PBX1P40424 430 aa25.24■■□□□ 1.63
SDF2L1-201ENST00000248958 SULT1E1P49888 294 aa25.24■■□□□ 1.63
SDF2L1-201ENST00000248958 NME3Q13232 169 aa25.24■■□□□ 1.63
SDF2L1-201ENST00000248958 SLC25A52Q3SY17 297 aa25.24■■□□□ 1.63
SDF2L1-201ENST00000248958 MS4A13Q5J8X5 152 aa25.24■■□□□ 1.63
SDF2L1-201ENST00000248958 RNF43Q68DV7 783 aa25.24■■□□□ 1.63
SDF2L1-201ENST00000248958 RFWD3Q6PCD5 774 aa25.24■■□□□ 1.63
SDF2L1-201ENST00000248958 TSTD1Q8NFU3 115 aa25.24■■□□□ 1.63
SDF2L1-201ENST00000248958 SLC30A5Q8TAD4 765 aa25.24■■□□□ 1.63
SDF2L1-201ENST00000248958 WFIKKN2Q8TEU8 576 aa25.24■■□□□ 1.63
SDF2L1-201ENST00000248958 C11orf70Q9BRQ4 267 aa25.24■■□□□ 1.63
SDF2L1-201ENST00000248958 POLMQ9NP87 494 aaPredicted RBP25.24■■□□□ 1.63
SDF2L1-201ENST00000248958 ADAM22Q9P0K1 906 aa25.24■■□□□ 1.63
SDF2L1-201ENST00000248958 EBF1Q9UH73 591 aa25.24■■□□□ 1.63
SDF2L1-201ENST00000248958 SYNJ2BP-COX16A0A087WUM0 186 aa25.23■■□□□ 1.63
SDF2L1-201ENST00000248958 PRR23AA6NEV1 266 aa25.23■■□□□ 1.63
SDF2L1-201ENST00000248958 TBL1XO60907 577 aa25.23■■□□□ 1.63
SDF2L1-201ENST00000248958 ALDH1A2O94788 518 aa25.23■■□□□ 1.63
SDF2L1-201ENST00000248958 HNRNPLP14866 589 aaKnown RBP eCLIP25.23■■□□□ 1.63
SDF2L1-201ENST00000248958 NTSR1P30989 418 aa25.23■■□□□ 1.63
SDF2L1-201ENST00000248958 PRKCIP41743 596 aa25.23■■□□□ 1.63
SDF2L1-201ENST00000248958 C2CD6Q53TS8 623 aa25.23■■□□□ 1.63
SDF2L1-201ENST00000248958 BRMS1LQ5PSV4 323 aa25.23■■□□□ 1.63
SDF2L1-201ENST00000248958 CCDC117Q8IWD4 279 aaPredicted RBP25.23■■□□□ 1.63
SDF2L1-201ENST00000248958 HHIPQ96QV1 700 aa25.23■■□□□ 1.63
SDF2L1-201ENST00000248958 EPC1Q9H2F5 836 aa25.23■■□□□ 1.63
SDF2L1-201ENST00000248958 COX16Q9P0S2 106 aa25.23■■□□□ 1.63
SDF2L1-201ENST00000248958 IFNKQ9P0W0 207 aa25.23■■□□□ 1.63
SDF2L1-201ENST00000248958 F5H5T6 163 aa25.22■■□□□ 1.63
SDF2L1-201ENST00000248958 CBFA2T2O43439 604 aa25.22■■□□□ 1.63
SDF2L1-201ENST00000248958 GFRA3O60609 400 aa25.22■■□□□ 1.63
SDF2L1-201ENST00000248958 TACR2P21452 398 aa25.22■■□□□ 1.63
SDF2L1-201ENST00000248958 C1QBPQ07021 282 aaKnown RBP25.22■■□□□ 1.63
SDF2L1-201ENST00000248958 DMWDQ09019 674 aa25.22■■□□□ 1.63
SDF2L1-201ENST00000248958 ACBD5Q5T8D3 534 aaPredicted RBP25.22■■□□□ 1.63
SDF2L1-201ENST00000248958 HEATR6Q6AI08 1181 aaKnown RBP25.22■■□□□ 1.63
SDF2L1-201ENST00000248958 CHSY1Q86X52 802 aa25.22■■□□□ 1.63
SDF2L1-201ENST00000248958 DDX51Q8N8A6 666 aaKnown RBP eCLIP25.22■■□□□ 1.63
SDF2L1-201ENST00000248958 METTL5Q9NRN9 209 aaKnown RBP25.22■■□□□ 1.63
SDF2L1-201ENST00000248958 CLEC4EQ9ULY5 219 aa25.22■■□□□ 1.63
SDF2L1-201ENST00000248958 ANTXRLA6NF34 631 aa25.21■■□□□ 1.63
SDF2L1-201ENST00000248958 SGK1O00141 431 aa25.21■■□□□ 1.63
SDF2L1-201ENST00000248958 AXIN1O15169 862 aa25.21■■□□□ 1.63
SDF2L1-201ENST00000248958 FLT3P36888 993 aa25.21■■□□□ 1.63
SDF2L1-201ENST00000248958 CXCR3P49682 368 aa25.21■■□□□ 1.63
SDF2L1-201ENST00000248958 DEUP1Q05D60 604 aa25.21■■□□□ 1.63
SDF2L1-201ENST00000248958 PTP4A2Q12974 167 aa25.21■■□□□ 1.63
SDF2L1-201ENST00000248958 GEN1Q17RS7 908 aa25.21■■□□□ 1.63
SDF2L1-201ENST00000248958 TTC39BQ5VTQ0 682 aaPredicted RBP25.21■■□□□ 1.63
SDF2L1-201ENST00000248958 EGFLAMQ63HQ2 1017 aa25.21■■□□□ 1.63
SDF2L1-201ENST00000248958 RAP1GAP2Q684P5 730 aa25.21■■□□□ 1.63
SDF2L1-201ENST00000248958 ACAD10Q6JQN1 1059 aa25.21■■□□□ 1.63
SDF2L1-201ENST00000248958 CHPFQ8IZ52 775 aa25.21■■□□□ 1.63
SDF2L1-201ENST00000248958 AHI1Q8N157 1196 aa25.21■■□□□ 1.63
SDF2L1-201ENST00000248958 PRICKLE1Q96MT3 831 aaPredicted RBP25.21■■□□□ 1.63
SDF2L1-201ENST00000248958 SYT11Q9BT88 431 aa25.21■■□□□ 1.63
SDF2L1-201ENST00000248958 WDCPQ9H6R7 721 aa25.21■■□□□ 1.63
SDF2L1-201ENST00000248958 XPO7Q9UIA9 1087 aaKnown RBP25.21■■□□□ 1.63
SDF2L1-201ENST00000248958 ITIH6Q6UXX5 1313 aa25.2■■□□□ 1.62
SDF2L1-201ENST00000248958 ADAM23O75077 832 aa25.2■■□□□ 1.62
SDF2L1-201ENST00000248958 SGSHP51688 502 aa25.2■■□□□ 1.62
SDF2L1-201ENST00000248958 KLHL30Q0D2K2 578 aa25.2■■□□□ 1.62
SDF2L1-201ENST00000248958 MON1BQ7L1V2 547 aa25.2■■□□□ 1.62
SDF2L1-201ENST00000248958 KIAA0907Q7Z7F0 614 aaPredicted RBP25.2■■□□□ 1.62
SDF2L1-201ENST00000248958 RASSF3Q86WH2 238 aa25.2■■□□□ 1.62
SDF2L1-201ENST00000248958 MFN1Q8IWA4 741 aa25.2■■□□□ 1.62
SDF2L1-201ENST00000248958 LGI2Q8N0V4 545 aa25.2■■□□□ 1.62
SDF2L1-201ENST00000248958 C3orf20Q8ND61 904 aa25.2■■□□□ 1.62
SDF2L1-201ENST00000248958 FIBINQ8TAL6 211 aa25.2■■□□□ 1.62
SDF2L1-201ENST00000248958 SYN2Q92777 582 aaPredicted RBP25.2■■□□□ 1.62
SDF2L1-201ENST00000248958 VCPIP1Q96JH7 1222 aa25.2■■□□□ 1.62
SDF2L1-201ENST00000248958 PRMT1Q99873 361 aaKnown RBP25.2■■□□□ 1.62
SDF2L1-201ENST00000248958 SELENOOQ9BVL4 669 aa25.2■■□□□ 1.62
SDF2L1-201ENST00000248958 HAUS4Q9H6D7 363 aa25.2■■□□□ 1.62
SDF2L1-201ENST00000248958 PIGVQ9NUD9 493 aa25.2■■□□□ 1.62
SDF2L1-201ENST00000248958 POLR3BQ9NW08 1133 aaPredicted RBP25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms