RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 DDX50Q9BQ39 737 aaKnown RBP12.98□□□□□ -0.33
RAB3IP-201ENST00000247833 PNPOQ9NVS9 261 aa12.98□□□□□ -0.33
RAB3IP-201ENST00000247833 ITM2AO43736 263 aa12.98□□□□□ -0.33
RAB3IP-201ENST00000247833 PFKMP08237 780 aa12.98□□□□□ -0.33
RAB3IP-201ENST00000247833 ATP6V1C1P21283 382 aa12.98□□□□□ -0.33
RAB3IP-201ENST00000247833 MAP3K7CLP57077 242 aa12.98□□□□□ -0.33
RAB3IP-201ENST00000247833 ARHGAP1Q07960 439 aa12.98□□□□□ -0.33
RAB3IP-201ENST00000247833 RWDD4Q6NW29 188 aaKnown RBP12.98□□□□□ -0.33
RAB3IP-201ENST00000247833 RIPOR1Q6ZS17 1223 aa12.98□□□□□ -0.33
RAB3IP-201ENST00000247833 FASTKD5Q7L8L6 764 aaKnown RBP12.98□□□□□ -0.33
RAB3IP-201ENST00000247833 ZNF354CQ86Y25 554 aa12.98□□□□□ -0.33
RAB3IP-201ENST00000247833 SKA1Q96BD8 255 aa12.98□□□□□ -0.33
RAB3IP-201ENST00000247833 SIGLEC10Q96LC7 697 aa12.98□□□□□ -0.33
RAB3IP-201ENST00000247833 MROH8Q9H579 483 aa12.98□□□□□ -0.33
RAB3IP-201ENST00000247833 CYLDQ9NQC7 956 aa12.98□□□□□ -0.33
RAB3IP-201ENST00000247833 SYBUQ9NX95 663 aa12.98□□□□□ -0.33
RAB3IP-201ENST00000247833 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.98□□□□□ -0.33
RAB3IP-201ENST00000247833 BFARQ9NZS9 450 aa12.98□□□□□ -0.33
RAB3IP-201ENST00000247833 HBS1LQ9Y450 684 aaKnown RBP12.98□□□□□ -0.33
RAB3IP-201ENST00000247833 PCDHA11Q9Y5I1 949 aa12.98□□□□□ -0.33
RAB3IP-201ENST00000247833 DCAF8L1A6NGE4 600 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 ABL2P42684 1182 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 GLRBP48167 497 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 NDUFV1P49821 464 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 NOTUMQ6P988 496 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 ISLR2Q6UXK2 745 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 RNF139Q8WU17 664 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 PYDC1Q8WXC3 89 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 P2RY11Q96G91 374 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 THAP1Q9NVV9 213 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 PSAT1Q9Y617 370 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 A0A0A0MRY4 1105 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 KPNA7A9QM74 516 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 POLBP06746 335 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 AP2B1P63010 937 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 KYAT1Q16773 422 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 HSP90AA5PQ58FG0 334 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 PRAMEF19Q5SWL8 479 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 IZUMO2Q6UXV1 221 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 C10orf107Q8IVU9 208 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 TP53INP2Q8IXH6 220 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 MAB21L3Q8N8X9 362 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 GPRC5AQ8NFJ5 357 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 DNAJB3Q8WWF6 145 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 SPATA13Q96N96 652 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 CAB39LQ9H9S4 337 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 CDHR5Q9HBB8 845 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 LNPEPQ9UIQ6 1025 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 STAP1Q9ULZ2 295 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 DPPA5A6NC42 116 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 OPHN1O60890 802 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 DGKIO75912 1065 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 SRGAP2BP0DMP2 458 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 MX2P20592 715 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 TPI1P60174 286 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 CTC1Q2NKJ3 1217 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 GRAMD1BQ3KR37 738 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 SLC27A1Q6PCB7 646 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 CTU1Q7Z7A3 348 aaKnown RBP12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 STRA8Q7Z7C7 330 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 ADGRF2Q8IZF7 708 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 GSTCDQ8NEC7 633 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 EDEM1Q92611 657 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 GBP5Q96PP8 586 aa12.97□□□□□ -0.33
RAB3IP-201ENST00000247833 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.96□□□□□ -0.33
RAB3IP-201ENST00000247833 A0A0G2JLL6 359 aaPredicted RBP12.96□□□□□ -0.33
RAB3IP-201ENST00000247833 GLRA3O75311 464 aa12.96□□□□□ -0.33
RAB3IP-201ENST00000247833 TGDSO95455 350 aa12.96□□□□□ -0.33
RAB3IP-201ENST00000247833 PROCP04070 461 aa12.96□□□□□ -0.33
RAB3IP-201ENST00000247833 RALBP11234 206 aa12.96□□□□□ -0.33
RAB3IP-201ENST00000247833 NCAM1P13591 858 aa12.96□□□□□ -0.33
RAB3IP-201ENST00000247833 AVPR1AP37288 418 aa12.96□□□□□ -0.33
RAB3IP-201ENST00000247833 USP4Q13107 963 aa12.96□□□□□ -0.33
RAB3IP-201ENST00000247833 BLMHQ13867 455 aa12.96□□□□□ -0.33
RAB3IP-201ENST00000247833 TAZQ16635 292 aa12.96□□□□□ -0.33
RAB3IP-201ENST00000247833 PAN2Q504Q3 1202 aaKnown RBP12.96□□□□□ -0.33
RAB3IP-201ENST00000247833 EFHC1Q5JVL4 640 aa12.96□□□□□ -0.33
RAB3IP-201ENST00000247833 TCHHL1Q5QJ38 904 aaPredicted RBP12.96□□□□□ -0.33
RAB3IP-201ENST00000247833 PACS1Q6VY07 963 aa12.96□□□□□ -0.33
RAB3IP-201ENST00000247833 EP400NLQ6ZTU2 488 aa12.96□□□□□ -0.33
RAB3IP-201ENST00000247833 CYP4V2Q6ZWL3 525 aaPredicted RBP12.96□□□□□ -0.33
RAB3IP-201ENST00000247833 PRRT2Q7Z6L0 340 aaPredicted RBP12.96□□□□□ -0.33
RAB3IP-201ENST00000247833 PIWIL2Q8TC59 973 aaKnown RBP12.96□□□□□ -0.33
RAB3IP-201ENST00000247833 SLC35F5Q8WV83 523 aa12.96□□□□□ -0.33
RAB3IP-201ENST00000247833 LRRC39Q96DD0 335 aa12.96□□□□□ -0.33
RAB3IP-201ENST00000247833 PTCD3Q96EY7 689 aaKnown RBP12.96□□□□□ -0.33
RAB3IP-201ENST00000247833 CELF6Q96J87 481 aaKnown RBP12.96□□□□□ -0.33
RAB3IP-201ENST00000247833 TSC22D3Q99576 134 aa12.96□□□□□ -0.33
RAB3IP-201ENST00000247833 ADARB2Q9NS39 739 aaKnown RBP12.96□□□□□ -0.33
RAB3IP-201ENST00000247833 SLC39A10Q9ULF5 831 aa12.96□□□□□ -0.33
RAB3IP-201ENST00000247833 CXCL11O14625 94 aa12.96□□□□□ -0.34
RAB3IP-201ENST00000247833 PPP1R12AO14974 1030 aaPredicted RBP12.96□□□□□ -0.34
RAB3IP-201ENST00000247833 MDM4O15151 490 aa12.96□□□□□ -0.34
RAB3IP-201ENST00000247833 DCXO43602 365 aa12.96□□□□□ -0.34
RAB3IP-201ENST00000247833 CNMDO75829 334 aa12.96□□□□□ -0.34
RAB3IP-201ENST00000247833 MRPS35P82673 323 aaKnown RBP12.96□□□□□ -0.34
RAB3IP-201ENST00000247833 INCA1Q0VD86 236 aa12.96□□□□□ -0.34
RAB3IP-201ENST00000247833 PDK1Q15118 436 aa12.96□□□□□ -0.34
RAB3IP-201ENST00000247833 DNAL1Q4LDG9 190 aa12.96□□□□□ -0.34
RAB3IP-201ENST00000247833 SLC9A4Q6AI14 798 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms