RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 FYNP06241 537 aa11.72□□□□□ -0.53
SF3B6-201ENST00000233468 MYBL1P10243 752 aa11.72□□□□□ -0.53
SF3B6-201ENST00000233468 KRT3P12035 628 aa11.72□□□□□ -0.53
SF3B6-201ENST00000233468 RPS9P46781 194 aaKnown RBP11.72□□□□□ -0.53
SF3B6-201ENST00000233468 PPP2R5DQ14738 602 aa11.72□□□□□ -0.53
SF3B6-201ENST00000233468 TAF5Q15542 800 aa11.72□□□□□ -0.53
SF3B6-201ENST00000233468 RSPO4Q2I0M5 234 aaPredicted RBP11.72□□□□□ -0.53
SF3B6-201ENST00000233468 MPPE1Q53F39 396 aa11.72□□□□□ -0.53
SF3B6-201ENST00000233468 LY6G5CQ5SRR4 150 aa11.72□□□□□ -0.53
SF3B6-201ENST00000233468 ADGRF1Q5T601 910 aa11.72□□□□□ -0.53
SF3B6-201ENST00000233468 SYPL2Q5VXT5 272 aa11.72□□□□□ -0.53
SF3B6-201ENST00000233468 DNAJC24Q6P3W2 148 aa11.72□□□□□ -0.53
SF3B6-201ENST00000233468 RHBDF2Q6PJF5 856 aa11.72□□□□□ -0.53
SF3B6-201ENST00000233468 TAC4Q86UU9 113 aa11.72□□□□□ -0.53
SF3B6-201ENST00000233468 CCDC117Q8IWD4 279 aaPredicted RBP11.72□□□□□ -0.53
SF3B6-201ENST00000233468 ATP6V0D2Q8N8Y2 350 aa11.72□□□□□ -0.53
SF3B6-201ENST00000233468 C3orf20Q8ND61 904 aa11.72□□□□□ -0.53
SF3B6-201ENST00000233468 CLDN23Q96B33 292 aa11.72□□□□□ -0.53
SF3B6-201ENST00000233468 MRFAP1L1Q96HT8 127 aa11.72□□□□□ -0.53
SF3B6-201ENST00000233468 PNKPQ96T60 521 aa11.72□□□□□ -0.53
SF3B6-201ENST00000233468 BBS2Q9BXC9 721 aa11.72□□□□□ -0.53
SF3B6-201ENST00000233468 DDIT4Q9NX09 232 aa11.72□□□□□ -0.53
SF3B6-201ENST00000233468 MARK1Q9P0L2 795 aa11.72□□□□□ -0.53
SF3B6-201ENST00000233468 DEC1Q9P2X7 70 aa11.72□□□□□ -0.53
SF3B6-201ENST00000233468 TJP2Q9UDY2 1190 aa11.72□□□□□ -0.53
SF3B6-201ENST00000233468 STOML2Q9UJZ1 356 aa11.72□□□□□ -0.53
SF3B6-201ENST00000233468 FBXO4Q9UKT5 387 aa11.72□□□□□ -0.53
SF3B6-201ENST00000233468 ATG2BQ96BY7 2078 aa11.72□□□□□ -0.53
SF3B6-201ENST00000233468 GOLGA8CPA6NN73 597 aa11.71□□□□□ -0.53
SF3B6-201ENST00000233468 AKR1B15C9JRZ8 316 aaPredicted RBP11.71□□□□□ -0.53
SF3B6-201ENST00000233468 M0QYT0 321 aa11.71□□□□□ -0.53
SF3B6-201ENST00000233468 SCAMP3O14828 347 aaKnown RBP11.71□□□□□ -0.53
SF3B6-201ENST00000233468 MSI1O43347 362 aaKnown RBP11.71□□□□□ -0.53
SF3B6-201ENST00000233468 ACSL4O60488 711 aa11.71□□□□□ -0.53
SF3B6-201ENST00000233468 ATG13O75143 517 aa11.71□□□□□ -0.53
SF3B6-201ENST00000233468 RTN2O75298 545 aa11.71□□□□□ -0.53
SF3B6-201ENST00000233468 IGLV3-27P01718 113 aa11.71□□□□□ -0.53
SF3B6-201ENST00000233468 KLKB1P03952 638 aa11.71□□□□□ -0.53
SF3B6-201ENST00000233468 APODP05090 189 aa11.71□□□□□ -0.53
SF3B6-201ENST00000233468 SKILP12757 684 aa11.71□□□□□ -0.53
SF3B6-201ENST00000233468 SDC4P31431 198 aa11.71□□□□□ -0.53
SF3B6-201ENST00000233468 HNRNPH3P31942 346 aaKnown RBP11.71□□□□□ -0.53
SF3B6-201ENST00000233468 SOX9P48436 509 aa11.71□□□□□ -0.53
SF3B6-201ENST00000233468 SULT1E1P49888 294 aa11.71□□□□□ -0.53
SF3B6-201ENST00000233468 MTAPQ13126 283 aa11.71□□□□□ -0.53
SF3B6-201ENST00000233468 PON2Q15165 354 aa11.71□□□□□ -0.53
SF3B6-201ENST00000233468 ZNF528Q3MIS6 628 aa11.71□□□□□ -0.53
SF3B6-201ENST00000233468 SLC25A52Q3SY17 297 aa11.71□□□□□ -0.53
SF3B6-201ENST00000233468 TMEM196Q5HYL7 178 aa11.71□□□□□ -0.53
SF3B6-201ENST00000233468 DCUN1D2Q6PH85 259 aa11.71□□□□□ -0.53
SF3B6-201ENST00000233468 TPGS1Q6ZTW0 290 aa11.71□□□□□ -0.53
SF3B6-201ENST00000233468 MON1BQ7L1V2 547 aa11.71□□□□□ -0.53
SF3B6-201ENST00000233468 ZNF571Q7Z3V5 609 aaPredicted RBP11.71□□□□□ -0.53
SF3B6-201ENST00000233468 TMC6Q7Z403 805 aa11.71□□□□□ -0.53
SF3B6-201ENST00000233468 MCOLN2Q8IZK6 566 aa11.71□□□□□ -0.53
SF3B6-201ENST00000233468 ZBTB44Q8NCP5 570 aa11.71□□□□□ -0.53
SF3B6-201ENST00000233468 DDI1Q8WTU0 396 aa11.71□□□□□ -0.53
SF3B6-201ENST00000233468 TMA16Q96EY4 203 aaKnown RBP11.71□□□□□ -0.53
SF3B6-201ENST00000233468 PGAP3Q96FM1 320 aaPredicted RBP11.71□□□□□ -0.53
SF3B6-201ENST00000233468 SLC39A13Q96H72 371 aa11.71□□□□□ -0.53
SF3B6-201ENST00000233468 BTN2A3PQ96KV6 586 aa11.71□□□□□ -0.53
SF3B6-201ENST00000233468 DNAJC7Q99615 494 aa11.71□□□□□ -0.53
SF3B6-201ENST00000233468 SYT11Q9BT88 431 aa11.71□□□□□ -0.53
SF3B6-201ENST00000233468 DEF6Q9H4E7 631 aa11.71□□□□□ -0.53
SF3B6-201ENST00000233468 LMAN1LQ9HAT1 526 aa11.71□□□□□ -0.53
SF3B6-201ENST00000233468 PARVAQ9NVD7 372 aa11.71□□□□□ -0.53
SF3B6-201ENST00000233468 DLL3Q9NYJ7 618 aa11.71□□□□□ -0.53
SF3B6-201ENST00000233468 SCINQ9Y6U3 715 aa11.71□□□□□ -0.53
SF3B6-201ENST00000233468 SDK1Q7Z5N4 2213 aa11.7□□□□□ -0.54
SF3B6-201ENST00000233468 LAMA1P25391 3075 aa11.7□□□□□ -0.54
SF3B6-201ENST00000233468 OTOL1A6NHN0 477 aaPredicted RBP11.7□□□□□ -0.54
SF3B6-201ENST00000233468 SIGLEC16A6NMB1 481 aa11.7□□□□□ -0.54
SF3B6-201ENST00000233468 GOLGA6L6A8MZA4 724 aa11.7□□□□□ -0.54
SF3B6-201ENST00000233468 NEDD8-MDP1E9PL57 170 aa11.7□□□□□ -0.54
SF3B6-201ENST00000233468 LILRB5O75023 590 aa11.7□□□□□ -0.54
SF3B6-201ENST00000233468 IGLV3-25P01717 112 aa11.7□□□□□ -0.54
SF3B6-201ENST00000233468 FTLP02792 175 aaPredicted RBP11.7□□□□□ -0.54
SF3B6-201ENST00000233468 TYRP14679 529 aa11.7□□□□□ -0.54
SF3B6-201ENST00000233468 PDGFRAP16234 1089 aa11.7□□□□□ -0.54
SF3B6-201ENST00000233468 GRIA2P42262 883 aa11.7□□□□□ -0.54
SF3B6-201ENST00000233468 GALK1P51570 392 aa11.7□□□□□ -0.54
SF3B6-201ENST00000233468 DEUP1Q05D60 604 aa11.7□□□□□ -0.54
SF3B6-201ENST00000233468 NME3Q13232 169 aa11.7□□□□□ -0.54
SF3B6-201ENST00000233468 PUM1Q14671 1186 aaKnown RBP eCLIP11.7□□□□□ -0.541e-10■■□□□ 12.6
SF3B6-201ENST00000233468 ARL13BQ3SXY8 428 aa11.7□□□□□ -0.54
SF3B6-201ENST00000233468 ZC3H12AQ5D1E8 599 aaKnown RBP11.7□□□□□ -0.54
SF3B6-201ENST00000233468 BRMS1LQ5PSV4 323 aa11.7□□□□□ -0.54
SF3B6-201ENST00000233468 MPP7Q5T2T1 576 aa11.7□□□□□ -0.54
SF3B6-201ENST00000233468 TMEM25Q86YD3 366 aa11.7□□□□□ -0.54
SF3B6-201ENST00000233468 FAM217AQ8IXS0 508 aa11.7□□□□□ -0.54
SF3B6-201ENST00000233468 ADAM32Q8TC27 787 aa11.7□□□□□ -0.54
SF3B6-201ENST00000233468 ATRIPQ8WXE1 791 aa11.7□□□□□ -0.54
SF3B6-201ENST00000233468 NELL1Q92832 810 aa11.7□□□□□ -0.54
SF3B6-201ENST00000233468 PIWIL1Q96J94 861 aaKnown RBP11.7□□□□□ -0.54
SF3B6-201ENST00000233468 FCRL2Q96LA5 508 aaPredicted RBP11.7□□□□□ -0.54
SF3B6-201ENST00000233468 NPY6RQ99463 290 aa11.7□□□□□ -0.54
SF3B6-201ENST00000233468 SLC2A11Q9BYW1 496 aa11.7□□□□□ -0.54
SF3B6-201ENST00000233468 WDCPQ9H6R7 721 aa11.7□□□□□ -0.54
SF3B6-201ENST00000233468 MRPL47Q9HD33 250 aaKnown RBP11.7□□□□□ -0.54
SF3B6-201ENST00000233468 METTL5Q9NRN9 209 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms