RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 HSF5Q4G112 596 aaPredicted RBP21.21■□□□□ 0.99
SNX3-201ENST00000230085 ZFYVE27Q5T4F4 411 aa21.21■□□□□ 0.99
SNX3-201ENST00000230085 WDR49Q8IV35 697 aa21.21■□□□□ 0.99
SNX3-201ENST00000230085 WDTC1Q8N5D0 677 aa21.21■□□□□ 0.99
SNX3-201ENST00000230085 PHC3Q8NDX5 983 aa21.21■□□□□ 0.99
SNX3-201ENST00000230085 HAPLN3Q96S86 360 aa21.21■□□□□ 0.99
SNX3-201ENST00000230085 SRPK1Q96SB4 655 aaKnown RBP21.21■□□□□ 0.99
SNX3-201ENST00000230085 ECSITQ9BQ95 431 aa21.21■□□□□ 0.99
SNX3-201ENST00000230085 CCDC106Q9BWC9 280 aa21.21■□□□□ 0.99
SNX3-201ENST00000230085 HAPLN2Q9GZV7 340 aa21.21■□□□□ 0.99
SNX3-201ENST00000230085 C2orf40Q9H1Z8 148 aa21.21■□□□□ 0.99
SNX3-201ENST00000230085 PIDD1Q9HB75 910 aa21.21■□□□□ 0.99
SNX3-201ENST00000230085 SPECC1L-ADORA2AF8WAN1 911 aa21.2■□□□□ 0.99
SNX3-201ENST00000230085 GOLGA8SH3BPF8 625 aa21.2■□□□□ 0.99
SNX3-201ENST00000230085 GOLGA8MH3BSY2 632 aa21.2■□□□□ 0.99
SNX3-201ENST00000230085 K7ERI5 159 aa21.2■□□□□ 0.99
SNX3-201ENST00000230085 COPEO14579 308 aa21.2■□□□□ 0.99
SNX3-201ENST00000230085 BBS9Q3SYG4 887 aa21.2■□□□□ 0.99
SNX3-201ENST00000230085 KBTBD12Q3ZCT8 623 aa21.2■□□□□ 0.99
SNX3-201ENST00000230085 ACAD11Q709F0 780 aa21.2■□□□□ 0.99
SNX3-201ENST00000230085 CATSPER4Q7RTX7 472 aa21.2■□□□□ 0.99
SNX3-201ENST00000230085 BRSK2Q8IWQ3 736 aa21.2■□□□□ 0.99
SNX3-201ENST00000230085 RBM15BQ8NDT2 890 aaKnown RBP21.2■□□□□ 0.99
SNX3-201ENST00000230085 EPB41L1Q9H4G0 881 aa21.2■□□□□ 0.99
SNX3-201ENST00000230085 TTLL13PA6NNM8 815 aa21.2■□□□□ 0.98
SNX3-201ENST00000230085 PYGBP11216 843 aa21.2■□□□□ 0.98
SNX3-201ENST00000230085 ELK3P41970 407 aa21.2■□□□□ 0.98
SNX3-201ENST00000230085 EFNA5P52803 228 aa21.2■□□□□ 0.98
SNX3-201ENST00000230085 AMHR2Q16671 573 aa21.2■□□□□ 0.98
SNX3-201ENST00000230085 TTC7BQ86TV6 843 aa21.2■□□□□ 0.98
SNX3-201ENST00000230085 TREML1Q86YW5 311 aa21.2■□□□□ 0.98
SNX3-201ENST00000230085 ULK2Q8IYT8 1036 aa21.2■□□□□ 0.98
SNX3-201ENST00000230085 ARFGAP1Q8N6T3 406 aa21.2■□□□□ 0.98
SNX3-201ENST00000230085 OLFM3Q96PB7 478 aa21.2■□□□□ 0.98
SNX3-201ENST00000230085 GBP5Q96PP8 586 aa21.2■□□□□ 0.98
SNX3-201ENST00000230085 NIF3L1Q9GZT8 377 aa21.2■□□□□ 0.98
SNX3-201ENST00000230085 FZD8Q9H461 694 aa21.2■□□□□ 0.98
SNX3-201ENST00000230085 RSAD1Q9HA92 442 aa21.2■□□□□ 0.98
SNX3-201ENST00000230085 NDE1Q9NXR1 346 aa21.2■□□□□ 0.98
SNX3-201ENST00000230085 TCRBV7S3A2A0A539 114 aa21.19■□□□□ 0.98
SNX3-201ENST00000230085 MCF2LO15068 1137 aa21.19■□□□□ 0.98
SNX3-201ENST00000230085 B4GALT5O43286 388 aa21.19■□□□□ 0.98
SNX3-201ENST00000230085 BUD23O43709 281 aaKnown RBP21.19■□□□□ 0.98
SNX3-201ENST00000230085 EDN1P05305 212 aa21.19■□□□□ 0.98
SNX3-201ENST00000230085 AMPD1P23109 780 aa21.19■□□□□ 0.98
SNX3-201ENST00000230085 BTKQ06187 659 aa21.19■□□□□ 0.98
SNX3-201ENST00000230085 CUL3Q13618 768 aa21.19■□□□□ 0.98
SNX3-201ENST00000230085 NOMO1Q15155 1222 aa21.19■□□□□ 0.98
SNX3-201ENST00000230085 LMBRD2Q68DH5 695 aaPredicted RBP21.19■□□□□ 0.98
SNX3-201ENST00000230085 C4orf22Q6V702 233 aa21.19■□□□□ 0.98
SNX3-201ENST00000230085 TIFABQ6ZNK6 161 aa21.19■□□□□ 0.98
SNX3-201ENST00000230085 RIPOR1Q6ZS17 1223 aa21.19■□□□□ 0.98
SNX3-201ENST00000230085 CYS1Q717R9 158 aa21.19■□□□□ 0.98
SNX3-201ENST00000230085 SDCCAG8Q86SQ7 713 aaPredicted RBP21.19■□□□□ 0.98
SNX3-201ENST00000230085 UNC45BQ8IWX7 931 aa21.19■□□□□ 0.98
SNX3-201ENST00000230085 SLC4A11Q8NBS3 891 aa21.19■□□□□ 0.98
SNX3-201ENST00000230085 SEPT8Q92599 483 aa21.19■□□□□ 0.98
SNX3-201ENST00000230085 MRRFQ96E11 262 aaKnown RBP21.19■□□□□ 0.98
SNX3-201ENST00000230085 FAM161BQ96MY7 647 aa21.19■□□□□ 0.98
SNX3-201ENST00000230085 PANX3Q96QZ0 392 aa21.19■□□□□ 0.98
SNX3-201ENST00000230085 GORASP1Q9BQQ3 440 aa21.19■□□□□ 0.98
SNX3-201ENST00000230085 TTLL3Q9Y4R7 772 aa21.19■□□□□ 0.98
SNX3-201ENST00000230085 WASF2Q9Y6W5 498 aa21.19■□□□□ 0.98
SNX3-201ENST00000230085 GOLGA8RI6L899 631 aa21.18■□□□□ 0.98
SNX3-201ENST00000230085 GRM2Q14416 872 aa21.18■□□□□ 0.98
SNX3-201ENST00000230085 SURF1Q15526 300 aa21.18■□□□□ 0.98
SNX3-201ENST00000230085 ZPBP2Q6X784 338 aa21.18■□□□□ 0.98
SNX3-201ENST00000230085 OTOP2Q7RTS6 562 aa21.18■□□□□ 0.98
SNX3-201ENST00000230085 IGDCC3Q8IVU1 814 aa21.18■□□□□ 0.98
SNX3-201ENST00000230085 STKLD1Q8NE28 680 aa21.18■□□□□ 0.98
SNX3-201ENST00000230085 PIP4K2CQ8TBX8 421 aa21.18■□□□□ 0.98
SNX3-201ENST00000230085 TTC17Q96AE7 1141 aa21.18■□□□□ 0.98
SNX3-201ENST00000230085 E2F7Q96AV8 911 aa21.18■□□□□ 0.98
SNX3-201ENST00000230085 HAUS1Q96CS2 278 aa21.18■□□□□ 0.98
SNX3-201ENST00000230085 VCX3BQ9H321 246 aa21.18■□□□□ 0.98
SNX3-201ENST00000230085 SLC7A8Q9UHI5 535 aa21.18■□□□□ 0.98
SNX3-201ENST00000230085 FAM237BA0A1B0GVD1 139 aa21.18■□□□□ 0.98
SNX3-201ENST00000230085 E5RJQ4 531 aa21.18■□□□□ 0.98
SNX3-201ENST00000230085 AP1G1O43747 822 aa21.18■□□□□ 0.98
SNX3-201ENST00000230085 MGEA5O60502 916 aa21.18■□□□□ 0.98
SNX3-201ENST00000230085 CCNT2O60583 730 aaKnown RBP21.18■□□□□ 0.98
SNX3-201ENST00000230085 TSPAN1O60635 241 aa21.18■□□□□ 0.98
SNX3-201ENST00000230085 PRKCBP05771 671 aa21.18■□□□□ 0.98
SNX3-201ENST00000230085 PFKMP08237 780 aa21.18■□□□□ 0.98
SNX3-201ENST00000230085 MYL4P12829 197 aa21.18■□□□□ 0.98
SNX3-201ENST00000230085 PSMA2P25787 234 aa21.18■□□□□ 0.98
SNX3-201ENST00000230085 IL1R2P27930 398 aa21.18■□□□□ 0.98
SNX3-201ENST00000230085 HOXA11P31270 313 aaPredicted RBP21.18■□□□□ 0.98
SNX3-201ENST00000230085 ACOT2P49753 483 aa21.18■□□□□ 0.98
SNX3-201ENST00000230085 EIF3EP60228 445 aaKnown RBP21.18■□□□□ 0.98
SNX3-201ENST00000230085 YWHAEP62258 255 aaKnown RBP21.18■□□□□ 0.98
SNX3-201ENST00000230085 BST1Q10588 318 aa21.18■□□□□ 0.98
SNX3-201ENST00000230085 TMEM240Q5SV17 173 aa21.18■□□□□ 0.98
SNX3-201ENST00000230085 CNKSR3Q6P9H4 555 aa21.18■□□□□ 0.98
SNX3-201ENST00000230085 MCUQ8NE86 351 aa21.18■□□□□ 0.98
SNX3-201ENST00000230085 OR5B17Q8NGF7 314 aa21.18■□□□□ 0.98
SNX3-201ENST00000230085 JADE3Q92613 823 aa21.18■□□□□ 0.98
SNX3-201ENST00000230085 CPB2Q96IY4 423 aa21.18■□□□□ 0.98
SNX3-201ENST00000230085 MSTO1Q9BUK6 570 aa21.18■□□□□ 0.98
SNX3-201ENST00000230085 IQCGQ9H095 443 aaKnown RBP21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms