RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 KLF16Q9BXK1 252 aaPredicted RBP14.19□□□□□ -0.14
UPK1A-201ENST00000222275 TAS2R14Q9NYV8 317 aa14.19□□□□□ -0.14
UPK1A-201ENST00000222275 TBC1D14Q9P2M4 693 aa14.19□□□□□ -0.14
UPK1A-201ENST00000222275 CNOT8Q9UFF9 292 aaKnown RBP14.19□□□□□ -0.14
UPK1A-201ENST00000222275 RASAL2Q9UJF2 1139 aa14.19□□□□□ -0.14
UPK1A-201ENST00000222275 TMEM59LQ9UK28 342 aa14.19□□□□□ -0.14
UPK1A-201ENST00000222275 NUDT5Q9UKK9 219 aa14.19□□□□□ -0.14
UPK1A-201ENST00000222275 SH3BP1Q9Y3L3 701 aa14.19□□□□□ -0.14
UPK1A-201ENST00000222275 CNOT1A5YKK6 2376 aaKnown RBP14.19□□□□□ -0.14
UPK1A-201ENST00000222275 MYO18AQ92614 2054 aaKnown RBP14.19□□□□□ -0.14
UPK1A-201ENST00000222275 EIF3CLB5ME19 914 aaKnown RBP14.18□□□□□ -0.14
UPK1A-201ENST00000222275 MDM4O15151 490 aa14.18□□□□□ -0.14
UPK1A-201ENST00000222275 LCA5LO95447 670 aa14.18□□□□□ -0.14
UPK1A-201ENST00000222275 HNRNPLP14866 589 aaKnown RBP eCLIP14.18□□□□□ -0.14
UPK1A-201ENST00000222275 RRM1P23921 792 aa14.18□□□□□ -0.14
UPK1A-201ENST00000222275 SDC4P31431 198 aa14.18□□□□□ -0.14
UPK1A-201ENST00000222275 RNASE9P60153 205 aaKnown RBP14.18□□□□□ -0.14
UPK1A-201ENST00000222275 RING1Q06587 406 aa14.18□□□□□ -0.14
UPK1A-201ENST00000222275 GRSF1Q12849 480 aaKnown RBP eCLIP14.18□□□□□ -0.14
UPK1A-201ENST00000222275 DHCR24Q15392 516 aa14.18□□□□□ -0.14
UPK1A-201ENST00000222275 EMC10Q5UCC4 262 aa14.18□□□□□ -0.14
UPK1A-201ENST00000222275 NUGGCQ68CJ6 796 aa14.18□□□□□ -0.14
UPK1A-201ENST00000222275 PLEKHA7Q6IQ23 1121 aa14.18□□□□□ -0.14
UPK1A-201ENST00000222275 C1orf228Q6PIY5 440 aa14.18□□□□□ -0.14
UPK1A-201ENST00000222275 SND1Q7KZF4 910 aaKnown RBP eCLIP14.18□□□□□ -0.14
UPK1A-201ENST00000222275 MIB1Q86YT6 1006 aa14.18□□□□□ -0.14
UPK1A-201ENST00000222275 UNC45BQ8IWX7 931 aa14.18□□□□□ -0.14
UPK1A-201ENST00000222275 SYNPOQ8N3V7 929 aa14.18□□□□□ -0.14
UPK1A-201ENST00000222275 CPA6Q8N4T0 437 aa14.18□□□□□ -0.14
UPK1A-201ENST00000222275 DQX1Q8TE96 717 aaKnown RBP14.18□□□□□ -0.14
UPK1A-201ENST00000222275 RUBCNQ92622 972 aa14.18□□□□□ -0.14
UPK1A-201ENST00000222275 CD101Q93033 1021 aa14.18□□□□□ -0.14
UPK1A-201ENST00000222275 OTUB2Q96DC9 234 aa14.18□□□□□ -0.14
UPK1A-201ENST00000222275 EIF3CQ99613 913 aaKnown RBP14.18□□□□□ -0.14
UPK1A-201ENST00000222275 IER2Q9BTL4 223 aa14.18□□□□□ -0.14
UPK1A-201ENST00000222275 METTL5Q9NRN9 209 aaKnown RBP14.18□□□□□ -0.14
UPK1A-201ENST00000222275 SLC12A6Q9UHW9 1150 aa14.18□□□□□ -0.14
UPK1A-201ENST00000222275 HCN2Q9UL51 889 aa14.18□□□□□ -0.14
UPK1A-201ENST00000222275 SMG5Q9UPR3 1016 aaKnown RBP14.18□□□□□ -0.14
UPK1A-201ENST00000222275 NAALADL1Q9UQQ1 740 aa14.18□□□□□ -0.14
UPK1A-201ENST00000222275 TLR6Q9Y2C9 796 aa14.18□□□□□ -0.14
UPK1A-201ENST00000222275 EPN1Q9Y6I3 576 aaPredicted RBP14.18□□□□□ -0.14
UPK1A-201ENST00000222275 SLC12A8A0AV02 714 aa14.17□□□□□ -0.14
UPK1A-201ENST00000222275 TRIM24O15164 1050 aa14.17□□□□□ -0.14
UPK1A-201ENST00000222275 GRAP2O75791 330 aa14.17□□□□□ -0.14
UPK1A-201ENST00000222275 TRUB2O95900 331 aaKnown RBP14.17□□□□□ -0.14
UPK1A-201ENST00000222275 FYNP06241 537 aa14.17□□□□□ -0.14
UPK1A-201ENST00000222275 TMEM253P0C7T8 217 aa14.17□□□□□ -0.14
UPK1A-201ENST00000222275 PDGFRAP16234 1089 aa14.17□□□□□ -0.14
UPK1A-201ENST00000222275 ABCB4P21439 1286 aa14.17□□□□□ -0.14
UPK1A-201ENST00000222275 HARS2P49590 506 aaKnown RBP14.17□□□□□ -0.14
UPK1A-201ENST00000222275 KRT83P78385 493 aa14.17□□□□□ -0.14
UPK1A-201ENST00000222275 TAF5Q15542 800 aa14.17□□□□□ -0.14
UPK1A-201ENST00000222275 TRIP4Q15650 581 aaPredicted RBP14.17□□□□□ -0.14
UPK1A-201ENST00000222275 SLC25A52Q3SY17 297 aa14.17□□□□□ -0.14
UPK1A-201ENST00000222275 C2CD6Q53TS8 623 aa14.17□□□□□ -0.14
UPK1A-201ENST00000222275 ACBD5Q5T8D3 534 aaPredicted RBP14.17□□□□□ -0.14
UPK1A-201ENST00000222275 BBS7Q8IWZ6 715 aa14.17□□□□□ -0.14
UPK1A-201ENST00000222275 ATP2A3Q93084 1043 aa14.17□□□□□ -0.14
UPK1A-201ENST00000222275 RMDN1Q96DB5 314 aa14.17□□□□□ -0.14
UPK1A-201ENST00000222275 PGAP3Q96FM1 320 aaPredicted RBP14.17□□□□□ -0.14
UPK1A-201ENST00000222275 CALR3Q96L12 384 aaKnown RBP14.17□□□□□ -0.14
UPK1A-201ENST00000222275 FAM126AQ9BYI3 521 aaPredicted RBP14.17□□□□□ -0.14
UPK1A-201ENST00000222275 FAM204AQ9H8W3 233 aa14.17□□□□□ -0.14
UPK1A-201ENST00000222275 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.17□□□□□ -0.14
UPK1A-201ENST00000222275 UVRAGQ9P2Y5 699 aa14.17□□□□□ -0.14
UPK1A-201ENST00000222275 NENFQ9UMX5 172 aa14.17□□□□□ -0.14
UPK1A-201ENST00000222275 ABCA7Q8IZY2 2146 aa14.17□□□□□ -0.14
UPK1A-201ENST00000222275 TCRBV5S1A1TA0A578 114 aa14.16□□□□□ -0.14
UPK1A-201ENST00000222275 NDUFA10O95299 355 aa14.16□□□□□ -0.14
UPK1A-201ENST00000222275 LATS1O95835 1130 aa14.16□□□□□ -0.14
UPK1A-201ENST00000222275 APOEP02649 317 aa14.16□□□□□ -0.14
UPK1A-201ENST00000222275 PTMAP06454 111 aaKnown RBP14.16□□□□□ -0.14
UPK1A-201ENST00000222275 GPD1P21695 349 aa14.16□□□□□ -0.14
UPK1A-201ENST00000222275 DRD1P21728 446 aa14.16□□□□□ -0.14
UPK1A-201ENST00000222275 HOXA6P31267 233 aa14.16□□□□□ -0.14
UPK1A-201ENST00000222275 MAGEA1P43355 309 aa14.16□□□□□ -0.14
UPK1A-201ENST00000222275 PTPN9P43378 593 aa14.16□□□□□ -0.14
UPK1A-201ENST00000222275 GALCP54803 685 aa14.16□□□□□ -0.14
UPK1A-201ENST00000222275 TBX4P57082 545 aa14.16□□□□□ -0.14
UPK1A-201ENST00000222275 MAMLD1Q13495 774 aa14.16□□□□□ -0.14
UPK1A-201ENST00000222275 LY6G5CQ5SRR4 150 aa14.16□□□□□ -0.14
UPK1A-201ENST00000222275 PPP1R15BQ5SWA1 713 aa14.16□□□□□ -0.14
UPK1A-201ENST00000222275 SYPL2Q5VXT5 272 aa14.16□□□□□ -0.14
UPK1A-201ENST00000222275 HTR3DQ70Z44 454 aa14.16□□□□□ -0.14
UPK1A-201ENST00000222275 TMEM25Q86YD3 366 aa14.16□□□□□ -0.14
UPK1A-201ENST00000222275 RHOT2Q8IXI1 618 aa14.16□□□□□ -0.14
UPK1A-201ENST00000222275 PHTF2Q8N3S3 785 aa14.16□□□□□ -0.14
UPK1A-201ENST00000222275 RPLP0P6Q8NHW5 317 aa14.16□□□□□ -0.14
UPK1A-201ENST00000222275 FNIP1Q8TF40 1166 aa14.16□□□□□ -0.14
UPK1A-201ENST00000222275 RXFP2Q8WXD0 754 aa14.16□□□□□ -0.14
UPK1A-201ENST00000222275 NT5C3BQ969T7 300 aa14.16□□□□□ -0.14
UPK1A-201ENST00000222275 AZIN2Q96A70 460 aa14.16□□□□□ -0.14
UPK1A-201ENST00000222275 PIWIL1Q96J94 861 aaKnown RBP14.16□□□□□ -0.14
UPK1A-201ENST00000222275 NPY6RQ99463 290 aa14.16□□□□□ -0.14
UPK1A-201ENST00000222275 DDX50Q9BQ39 737 aaKnown RBP14.16□□□□□ -0.14
UPK1A-201ENST00000222275 IRX2Q9BZI1 471 aaPredicted RBP14.16□□□□□ -0.14
UPK1A-201ENST00000222275 ZDHHC4Q9NPG8 344 aa14.16□□□□□ -0.14
UPK1A-201ENST00000222275 SPTLC3Q9NUV7 552 aa14.16□□□□□ -0.14
UPK1A-201ENST00000222275 SFMBT1Q9UHJ3 866 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms