RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 FNIP1Q8TF40 1166 aa17.05■□□□□ 0.32
LIM2-201ENST00000221973 FAM172AQ8WUF8 416 aa17.05■□□□□ 0.32
LIM2-201ENST00000221973 USP13Q92995 863 aaPredicted RBP17.05■□□□□ 0.32
LIM2-201ENST00000221973 ZFRQ96KR1 1074 aaKnown RBP17.05■□□□□ 0.32
LIM2-201ENST00000221973 SERPINB11Q96P15 392 aa17.05■□□□□ 0.32
LIM2-201ENST00000221973 LRRC3BQ96PB8 259 aa17.05■□□□□ 0.32
LIM2-201ENST00000221973 TSGA10Q9BZW7 698 aa17.05■□□□□ 0.32
LIM2-201ENST00000221973 PRMT8Q9NR22 394 aaPredicted RBP17.05■□□□□ 0.32
LIM2-201ENST00000221973 TDP1Q9NUW8 608 aa17.05■□□□□ 0.32
LIM2-201ENST00000221973 TRMT1Q9NXH9 659 aaKnown RBP17.05■□□□□ 0.32
LIM2-201ENST00000221973 GUCA1BQ9UMX6 200 aa17.05■□□□□ 0.32
LIM2-201ENST00000221973 ARHGAP26Q9UNA1 814 aa17.05■□□□□ 0.32
LIM2-201ENST00000221973 HBS1LQ9Y450 684 aaKnown RBP17.05■□□□□ 0.32
LIM2-201ENST00000221973 PAXBP1Q9Y5B6 917 aa17.05■□□□□ 0.32
LIM2-201ENST00000221973 ZNF638Q14966 1978 aaKnown RBP17.04■□□□□ 0.32
LIM2-201ENST00000221973 LEFTY2O00292 366 aa17.04■□□□□ 0.32
LIM2-201ENST00000221973 ZSCAN12O43309 604 aa17.04■□□□□ 0.32
LIM2-201ENST00000221973 KRT86O43790 486 aa17.04■□□□□ 0.32
LIM2-201ENST00000221973 LILRB5O75023 590 aa17.04■□□□□ 0.32
LIM2-201ENST00000221973 TDGF1P13385 188 aa17.04■□□□□ 0.32
LIM2-201ENST00000221973 RDXP35241 583 aaKnown RBP17.04■□□□□ 0.32
LIM2-201ENST00000221973 COG7P83436 770 aa17.04■□□□□ 0.32
LIM2-201ENST00000221973 FOXK2Q01167 660 aa17.04■□□□□ 0.32
LIM2-201ENST00000221973 PIGHQ14442 188 aaPredicted RBP17.04■□□□□ 0.32
LIM2-201ENST00000221973 TRIP4Q15650 581 aaPredicted RBP17.04■□□□□ 0.32
LIM2-201ENST00000221973 ARHGAP29Q52LW3 1261 aa17.04■□□□□ 0.32
LIM2-201ENST00000221973 TSSK4Q6SA08 328 aa17.04■□□□□ 0.32
LIM2-201ENST00000221973 STRADAQ7RTN6 431 aa17.04■□□□□ 0.32
LIM2-201ENST00000221973 KIAA2013Q8IYS2 634 aa17.04■□□□□ 0.32
LIM2-201ENST00000221973 SH3RF2Q8TEC5 729 aa17.04■□□□□ 0.32
LIM2-201ENST00000221973 CENPIQ92674 756 aaPredicted RBP17.04■□□□□ 0.32
LIM2-201ENST00000221973 IRF7Q92985 503 aa17.04■□□□□ 0.32
LIM2-201ENST00000221973 RNF34Q969K3 372 aa17.04■□□□□ 0.32
LIM2-201ENST00000221973 WBP2Q969T9 261 aa17.04■□□□□ 0.32
LIM2-201ENST00000221973 RMDN1Q96DB5 314 aa17.04■□□□□ 0.32
LIM2-201ENST00000221973 PGAP3Q96FM1 320 aaPredicted RBP17.04■□□□□ 0.32
LIM2-201ENST00000221973 PIGVQ9NUD9 493 aa17.04■□□□□ 0.32
LIM2-201ENST00000221973 CFAP97Q9P2B7 532 aa17.04■□□□□ 0.32
LIM2-201ENST00000221973 TLR6Q9Y2C9 796 aa17.04■□□□□ 0.32
LIM2-201ENST00000221973 HEPACAM2A8MVW5 462 aa17.03■□□□□ 0.32
LIM2-201ENST00000221973 SCAMP3O14828 347 aaKnown RBP17.03■□□□□ 0.32
LIM2-201ENST00000221973 BUB1BO60566 1050 aaPredicted RBP17.03■□□□□ 0.32
LIM2-201ENST00000221973 PROSCO94903 275 aa17.03■□□□□ 0.32
LIM2-201ENST00000221973 ENDOD1O94919 500 aa17.03■□□□□ 0.32
LIM2-201ENST00000221973 MOCS3O95396 460 aa17.03■□□□□ 0.32
LIM2-201ENST00000221973 F9P00740 461 aa17.03■□□□□ 0.32
LIM2-201ENST00000221973 WEE1P30291 646 aa17.03■□□□□ 0.32
LIM2-201ENST00000221973 KPNA1P52294 538 aaPredicted RBP17.03■□□□□ 0.32
LIM2-201ENST00000221973 HADHBP55084 474 aaKnown RBP17.03■□□□□ 0.32
LIM2-201ENST00000221973 HDAC4P56524 1084 aa17.03■□□□□ 0.32
LIM2-201ENST00000221973 EIF4EBP2Q13542 120 aaPredicted RBP17.03■□□□□ 0.32
LIM2-201ENST00000221973 ZC3H12AQ5D1E8 599 aaKnown RBP17.03■□□□□ 0.32
LIM2-201ENST00000221973 DAB2IPQ5VWQ8 1189 aa17.03■□□□□ 0.32
LIM2-201ENST00000221973 SCYL2Q6P3W7 929 aa17.03■□□□□ 0.32
LIM2-201ENST00000221973 MAMSTRQ6ZN01 415 aa17.03■□□□□ 0.32
LIM2-201ENST00000221973 ZNF662Q6ZS27 426 aa17.03■□□□□ 0.32
LIM2-201ENST00000221973 SND1Q7KZF4 910 aaKnown RBP eCLIP17.03■□□□□ 0.32
LIM2-201ENST00000221973 BNIPLQ7Z465 357 aa17.03■□□□□ 0.32
LIM2-201ENST00000221973 FAM131BQ86XD5 332 aa17.03■□□□□ 0.32
LIM2-201ENST00000221973 CPNE8Q86YQ8 564 aa17.03■□□□□ 0.32
LIM2-201ENST00000221973 TPCN2Q8NHX9 752 aa17.03■□□□□ 0.32
LIM2-201ENST00000221973 DEPDC1BQ8WUY9 529 aa17.03■□□□□ 0.32
LIM2-201ENST00000221973 RUBCNQ92622 972 aa17.03■□□□□ 0.32
LIM2-201ENST00000221973 FCRL2Q96LA5 508 aaPredicted RBP17.03■□□□□ 0.32
LIM2-201ENST00000221973 CHRDQ9H2X0 955 aa17.03■□□□□ 0.32
LIM2-201ENST00000221973 NDRG2Q9UN36 371 aaKnown RBP17.03■□□□□ 0.32
LIM2-201ENST00000221973 PCDHGA2Q9Y5H1 932 aa17.03■□□□□ 0.32
LIM2-201ENST00000221973 MAN2B1O00754 1011 aa17.02■□□□□ 0.32
LIM2-201ENST00000221973 NCAM2O15394 837 aa17.02■□□□□ 0.32
LIM2-201ENST00000221973 STC2O76061 302 aa17.02■□□□□ 0.32
LIM2-201ENST00000221973 RNF8O76064 485 aa17.02■□□□□ 0.32
LIM2-201ENST00000221973 CXCR3P49682 368 aa17.02■□□□□ 0.32
LIM2-201ENST00000221973 FCHO2Q0JRZ9 810 aa17.02■□□□□ 0.32
LIM2-201ENST00000221973 NNTQ13423 1086 aa17.02■□□□□ 0.32
LIM2-201ENST00000221973 GAS6Q14393 721 aa17.02■□□□□ 0.32
LIM2-201ENST00000221973 ERMP1Q7Z2K6 904 aa17.02■□□□□ 0.32
LIM2-201ENST00000221973 REXO1L1PQ8IX06 675 aa17.02■□□□□ 0.32
LIM2-201ENST00000221973 ARFGAP1Q8N6T3 406 aa17.02■□□□□ 0.32
LIM2-201ENST00000221973 CELF5Q8N6W0 485 aaKnown RBP17.02■□□□□ 0.32
LIM2-201ENST00000221973 NIPA2Q8N8Q9 360 aa17.02■□□□□ 0.32
LIM2-201ENST00000221973 RIN3Q8TB24 985 aa17.02■□□□□ 0.32
LIM2-201ENST00000221973 FAM3CQ92520 227 aa17.02■□□□□ 0.32
LIM2-201ENST00000221973 PLD4Q96BZ4 506 aa17.02■□□□□ 0.32
LIM2-201ENST00000221973 SLC39A13Q96H72 371 aa17.02■□□□□ 0.32
LIM2-201ENST00000221973 GOLPH3Q9H4A6 298 aa17.02■□□□□ 0.32
LIM2-201ENST00000221973 ZSCAN32Q9NX65 697 aa17.02■□□□□ 0.32
LIM2-201ENST00000221973 LCMT1Q9UIC8 334 aa17.02■□□□□ 0.32
LIM2-201ENST00000221973 MRPS17Q9Y2R5 130 aaKnown RBP17.02■□□□□ 0.32
LIM2-201ENST00000221973 SH3BP1Q9Y3L3 701 aa17.02■□□□□ 0.32
LIM2-201ENST00000221973 HYOU1Q9Y4L1 999 aa17.02■□□□□ 0.32
LIM2-201ENST00000221973 PIAS3Q9Y6X2 628 aa17.02■□□□□ 0.32
LIM2-201ENST00000221973 USP27XA6NNY8 438 aa17.01■□□□□ 0.31
LIM2-201ENST00000221973 LRCH4O75427 683 aa17.01■□□□□ 0.31
LIM2-201ENST00000221973 MOCS2O96007 188 aaPredicted RBP17.01■□□□□ 0.31
LIM2-201ENST00000221973 IGLV3-27P01718 113 aa17.01■□□□□ 0.31
LIM2-201ENST00000221973 CHRNB1P11230 501 aa17.01■□□□□ 0.31
LIM2-201ENST00000221973 CORO1AP31146 461 aaKnown RBP17.01■□□□□ 0.31
LIM2-201ENST00000221973 CCR1P32246 355 aa17.01■□□□□ 0.31
LIM2-201ENST00000221973 SSR1P43307 286 aaKnown RBP17.01■□□□□ 0.31
LIM2-201ENST00000221973 HARS2P49590 506 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms