RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 NUF2Q9BZD4 464 aa14.03□□□□□ -0.16
GABPB1-201ENST00000220429 DHX33Q9H6R0 707 aaKnown RBP14.03□□□□□ -0.16
GABPB1-201ENST00000220429 NINJ2Q9NZG7 142 aa14.03□□□□□ -0.16
GABPB1-201ENST00000220429 HACD3Q9P035 362 aa14.03□□□□□ -0.16
GABPB1-201ENST00000220429 AP4B1Q9Y6B7 739 aa14.03□□□□□ -0.16
GABPB1-201ENST00000220429 A6NL46 340 aa14.02□□□□□ -0.16
GABPB1-201ENST00000220429 UGT1A9O60656 530 aa14.02□□□□□ -0.16
GABPB1-201ENST00000220429 RSL1D1O76021 490 aaKnown RBP14.02□□□□□ -0.16
GABPB1-201ENST00000220429 MTA2O94776 668 aa14.02□□□□□ -0.16
GABPB1-201ENST00000220429 FYNP06241 537 aa14.02□□□□□ -0.16
GABPB1-201ENST00000220429 UGT1A6P19224 532 aa14.02□□□□□ -0.16
GABPB1-201ENST00000220429 UGT1A1P22309 533 aa14.02□□□□□ -0.16
GABPB1-201ENST00000220429 UGT1A4P22310 534 aa14.02□□□□□ -0.16
GABPB1-201ENST00000220429 PRDX6P30041 224 aa14.02□□□□□ -0.16
GABPB1-201ENST00000220429 UGT1A3P35503 534 aa14.02□□□□□ -0.16
GABPB1-201ENST00000220429 UGT1A5P35504 534 aa14.02□□□□□ -0.16
GABPB1-201ENST00000220429 ALDH3B2P48448 385 aa14.02□□□□□ -0.16
GABPB1-201ENST00000220429 MARCKSL1P49006 195 aa14.02□□□□□ -0.16
GABPB1-201ENST00000220429 LIG4P49917 911 aa14.02□□□□□ -0.16
GABPB1-201ENST00000220429 ENPEPQ07075 957 aa14.02□□□□□ -0.16
GABPB1-201ENST00000220429 BOLA3Q53S33 107 aa14.02□□□□□ -0.16
GABPB1-201ENST00000220429 OGFRL1Q5TC84 451 aaPredicted RBP14.02□□□□□ -0.16
GABPB1-201ENST00000220429 AADACL2Q6P093 401 aa14.02□□□□□ -0.16
GABPB1-201ENST00000220429 PRUNE1Q86TP1 453 aa14.02□□□□□ -0.16
GABPB1-201ENST00000220429 HCAR2Q8TDS4 363 aa14.02□□□□□ -0.16
GABPB1-201ENST00000220429 GIPC2Q8TF65 315 aa14.02□□□□□ -0.16
GABPB1-201ENST00000220429 OXNAD1Q96HP4 312 aaPredicted RBP14.02□□□□□ -0.16
GABPB1-201ENST00000220429 HAPLN2Q9GZV7 340 aa14.02□□□□□ -0.16
GABPB1-201ENST00000220429 RNF38Q9H0F5 515 aa14.02□□□□□ -0.16
GABPB1-201ENST00000220429 CDH19Q9H159 772 aa14.02□□□□□ -0.16
GABPB1-201ENST00000220429 C10orf88Q9H8K7 445 aa14.02□□□□□ -0.16
GABPB1-201ENST00000220429 UGT1A7Q9HAW7 530 aa14.02□□□□□ -0.16
GABPB1-201ENST00000220429 UGT1A10Q9HAW8 530 aa14.02□□□□□ -0.16
GABPB1-201ENST00000220429 UGT1A8Q9HAW9 530 aa14.02□□□□□ -0.16
GABPB1-201ENST00000220429 KCNK13Q9HB14 408 aa14.02□□□□□ -0.16
GABPB1-201ENST00000220429 C6orf203Q9P0P8 240 aaPredicted RBP14.02□□□□□ -0.16
GABPB1-201ENST00000220429 H0YCG3 227 aa14.02□□□□□ -0.17
GABPB1-201ENST00000220429 TP73O15350 636 aa14.02□□□□□ -0.17
GABPB1-201ENST00000220429 EXTL3O43909 919 aa14.02□□□□□ -0.17
GABPB1-201ENST00000220429 TMCC2O75069 709 aa14.02□□□□□ -0.17
GABPB1-201ENST00000220429 CALCAP01258 141 aa14.02□□□□□ -0.17
GABPB1-201ENST00000220429 HSPA1AP0DMV8 641 aaKnown RBP14.02□□□□□ -0.17
GABPB1-201ENST00000220429 HSPA1BP0DMV9 641 aaKnown RBP14.02□□□□□ -0.17
GABPB1-201ENST00000220429 GLRA2P23416 452 aa14.02□□□□□ -0.17
GABPB1-201ENST00000220429 S100A5P33763 92 aa14.02□□□□□ -0.17
GABPB1-201ENST00000220429 NLRP11P59045 1033 aaKnown RBP14.02□□□□□ -0.17
GABPB1-201ENST00000220429 OASLQ15646 514 aaKnown RBP14.02□□□□□ -0.17
GABPB1-201ENST00000220429 TRIM16LQ309B1 348 aa14.02□□□□□ -0.17
GABPB1-201ENST00000220429 LVRNQ6Q4G3 990 aa14.02□□□□□ -0.17
GABPB1-201ENST00000220429 C4orf33Q8N1A6 199 aa14.02□□□□□ -0.17
GABPB1-201ENST00000220429 TSPAN14Q8NG11 270 aa14.02□□□□□ -0.17
GABPB1-201ENST00000220429 PSPC1Q8WXF1 523 aaKnown RBP14.02□□□□□ -0.17
GABPB1-201ENST00000220429 NMUR2Q9GZQ4 415 aa14.02□□□□□ -0.17
GABPB1-201ENST00000220429 PORCNQ9H237 461 aa14.02□□□□□ -0.17
GABPB1-201ENST00000220429 WHRNQ9P202 907 aa14.02□□□□□ -0.17
GABPB1-201ENST00000220429 ERGIC3Q9Y282 383 aa14.02□□□□□ -0.17
GABPB1-201ENST00000220429 IGKV6D-21A0A0A0MT36 114 aa14.01□□□□□ -0.17
GABPB1-201ENST00000220429 H3BNX3 289 aa14.01□□□□□ -0.17
GABPB1-201ENST00000220429 GRIN3BO60391 1043 aa14.01□□□□□ -0.17
GABPB1-201ENST00000220429 INHBBP09529 407 aa14.01□□□□□ -0.17
GABPB1-201ENST00000220429 COMTP21964 271 aa14.01□□□□□ -0.17
GABPB1-201ENST00000220429 UBA1P22314 1058 aaKnown RBP14.01□□□□□ -0.17
GABPB1-201ENST00000220429 JAK1P23458 1154 aa14.01□□□□□ -0.17
GABPB1-201ENST00000220429 ETV3P41162 512 aa14.01□□□□□ -0.17
GABPB1-201ENST00000220429 ALDH1A3P47895 512 aa14.01□□□□□ -0.17
GABPB1-201ENST00000220429 TSPY1Q01534 308 aa14.01□□□□□ -0.17
GABPB1-201ENST00000220429 GCNT1Q02742 428 aa14.01□□□□□ -0.17
GABPB1-201ENST00000220429 MESDQ14696 234 aa14.01□□□□□ -0.17
GABPB1-201ENST00000220429 CPNE8Q86YQ8 564 aa14.01□□□□□ -0.17
GABPB1-201ENST00000220429 OSCP1Q8WVF1 389 aa14.01□□□□□ -0.17
GABPB1-201ENST00000220429 FAR2Q96K12 515 aa14.01□□□□□ -0.17
GABPB1-201ENST00000220429 TCF12Q99081 682 aa14.01□□□□□ -0.17
GABPB1-201ENST00000220429 ZSWIM1Q9BR11 485 aa14.01□□□□□ -0.17
GABPB1-201ENST00000220429 MARCH7Q9H992 704 aa14.01□□□□□ -0.17
GABPB1-201ENST00000220429 STYXL1Q9Y6J8 313 aa14.01□□□□□ -0.17
GABPB1-201ENST00000220429 SQORQ9Y6N5 450 aa14.01□□□□□ -0.17
GABPB1-201ENST00000220429 MIF4GDA9UHW6 222 aaKnown RBP14.01□□□□□ -0.17
GABPB1-201ENST00000220429 ICMTO60725 284 aa14.01□□□□□ -0.17
GABPB1-201ENST00000220429 CYP1A2P05177 515 aa14.01□□□□□ -0.17
GABPB1-201ENST00000220429 CCDC130P13994 396 aa14.01□□□□□ -0.17
GABPB1-201ENST00000220429 RAG1P15918 1043 aa14.01□□□□□ -0.17
GABPB1-201ENST00000220429 ARL2P36404 184 aa14.01□□□□□ -0.17
GABPB1-201ENST00000220429 COILP38432 576 aaPredicted RBP14.01□□□□□ -0.17
GABPB1-201ENST00000220429 CLDN10P78369 228 aa14.01□□□□□ -0.17
GABPB1-201ENST00000220429 IFITM2Q01629 132 aa14.01□□□□□ -0.17
GABPB1-201ENST00000220429 KDSRQ06136 332 aa14.01□□□□□ -0.17
GABPB1-201ENST00000220429 HIC1Q14526 733 aa14.01□□□□□ -0.17
GABPB1-201ENST00000220429 RABGAP1LQ5R372 815 aa14.01□□□□□ -0.17
GABPB1-201ENST00000220429 BTBD8Q5XKL5 378 aa14.01□□□□□ -0.17
GABPB1-201ENST00000220429 RHBDF2Q6PJF5 856 aa14.01□□□□□ -0.17
GABPB1-201ENST00000220429 RIOX2Q8IUF8 465 aa14.01□□□□□ -0.17
GABPB1-201ENST00000220429 ZNF564Q8TBZ8 553 aaPredicted RBP14.01□□□□□ -0.17
GABPB1-201ENST00000220429 TBC1D15Q8TC07 691 aa14.01□□□□□ -0.17
GABPB1-201ENST00000220429 ZBTB45Q96K62 511 aaPredicted RBP14.01□□□□□ -0.17
GABPB1-201ENST00000220429 BTBD6Q96KE9 485 aa14.01□□□□□ -0.17
GABPB1-201ENST00000220429 PCYT2Q99447 389 aa14.01□□□□□ -0.17
GABPB1-201ENST00000220429 AGO2Q9UKV8 859 aaKnown RBP14.01□□□□□ -0.17
GABPB1-201ENST00000220429 LRRC37A2A6NM11 1700 aa14.01□□□□□ -0.17
GABPB1-201ENST00000220429 GSTTP1A0A1W2PQM5 241 aa14□□□□□ -0.17
GABPB1-201ENST00000220429 SOWAHBA6NEL2 793 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms