RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 CHRNA1P02708 482 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 IQCF3P0C7M6 154 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 GABRR2P28476 465 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 OR1E1P30953 314 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 STIP1P31948 543 aaKnown RBP9.68□□□□□ -0.86
CCDC113-201ENST00000219299 COILP38432 576 aaPredicted RBP9.68□□□□□ -0.86
CCDC113-201ENST00000219299 NDUFV1P49821 464 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 INTS6LQ5JSJ4 861 aaKnown RBP9.68□□□□□ -0.86
CCDC113-201ENST00000219299 TPGS1Q6ZTW0 290 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 TRPM8Q7Z2W7 1104 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 LCA5Q86VQ0 697 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 SLC4A11Q8NBS3 891 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 DNAJC9Q8WXX5 260 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 TMEM121Q9BTD3 319 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 SAGE1Q9NXZ1 904 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 TIAM2Q8IVF5 1701 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 ENPP3O14638 875 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 GSTA4O15217 222 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 RARAP10276 462 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 MMP8P22894 467 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 MED21Q13503 144 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 SOWAHAQ2M3V2 549 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 RARS2Q5T160 578 aaKnown RBP9.68□□□□□ -0.86
CCDC113-201ENST00000219299 RASSF3Q86WH2 238 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 TNS4Q8IZW8 715 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 LGI2Q8N0V4 545 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 TRPV1Q8NER1 839 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 RBM15Q96T37 977 aaKnown RBP eCLIP9.68□□□□□ -0.86
CCDC113-201ENST00000219299 ACBD6Q9BR61 282 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 ADAM33Q9BZ11 813 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 WARS2Q9UGM6 360 aaKnown RBP9.68□□□□□ -0.86
CCDC113-201ENST00000219299 G3BP2Q9UN86 482 aaKnown RBP9.68□□□□□ -0.86
CCDC113-201ENST00000219299 TCP11X1B4DZS4 312 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 XPO1O14980 1071 aaKnown RBP9.68□□□□□ -0.86
CCDC113-201ENST00000219299 SERPINB4P48594 390 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 GATMP50440 423 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 NEK2P51955 445 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 CENPCQ03188 943 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 NT5DC3Q86UY8 548 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 PHF13Q86YI8 300 aaPredicted RBP9.68□□□□□ -0.86
CCDC113-201ENST00000219299 AUTS2Q8WXX7 1259 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 KCNK16Q96T55 309 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 FUT8Q9BYC5 575 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 ADAMTS10Q9H324 1103 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 SARS2Q9NP81 518 aaKnown RBP9.68□□□□□ -0.86
CCDC113-201ENST00000219299 KCNK1O00180 336 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 DNAJC6O75061 913 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 PGM1P36871 562 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 CASP2P42575 452 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 MRPS5P82675 430 aaKnown RBP9.68□□□□□ -0.86
CCDC113-201ENST00000219299 SMAD3P84022 425 aaKnown RBP9.68□□□□□ -0.86
CCDC113-201ENST00000219299 PMF1Q6P1K2 205 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 VSTM1Q6UX27 236 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 HERC6Q8IVU3 1022 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 LPIN3Q9BQK8 851 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 CEP41Q9BYV8 373 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 ABCF3Q9NUQ8 709 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 OR12D3Q9UGF7 316 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 SFMBT1Q9UHJ3 866 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 UBA6A0AVT1 1052 aaPredicted RBP9.67□□□□□ -0.86
CCDC113-201ENST00000219299 RAMP2O60895 175 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 CHN1P15882 459 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 RABGGTBP53611 331 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 OXCT1P55809 520 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 HDAC4P56524 1084 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 MOGSQ13724 837 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 TAS2R42Q7RTR8 314 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 MON1AQ86VX9 555 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 JOSD2Q8TAC2 188 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 PRMT1Q99873 361 aaKnown RBP9.67□□□□□ -0.86
CCDC113-201ENST00000219299 TCF25Q9BQ70 676 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 ERP44Q9BS26 406 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 CINPQ9BW66 212 aaPredicted RBP9.67□□□□□ -0.86
CCDC113-201ENST00000219299 NOD2Q9HC29 1040 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 PRDM4Q9UKN5 801 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 TRIM33Q9UPN9 1127 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 SNX5Q9Y5X3 404 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 ANKRD31Q8N7Z5 1873 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 SYN3O14994 580 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 PJA2O43164 708 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 ZNF143P52747 638 aaPredicted RBP9.67□□□□□ -0.86
CCDC113-201ENST00000219299 CREMQ03060 361 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 STAT4Q14765 748 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 KLC3Q6P597 504 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 USP6NLQ92738 828 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 ATXN7L3BQ96GX2 97 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.67□□□□□ -0.86
CCDC113-201ENST00000219299 XPO7Q9UIA9 1087 aaKnown RBP9.67□□□□□ -0.86
CCDC113-201ENST00000219299 NEU2Q9Y3R4 380 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 MEIS3P2A8K0S8 358 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 GPR32O75388 356 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 PAPOLAP51003 745 aaKnown RBP9.67□□□□□ -0.86
CCDC113-201ENST00000219299 POU5F1Q01860 360 aaKnown RBP9.67□□□□□ -0.86
CCDC113-201ENST00000219299 CYLC2Q14093 348 aaPredicted RBP9.67□□□□□ -0.86
CCDC113-201ENST00000219299 HGSNATQ68CP4 663 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 CYB5D1Q6P9G0 228 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 CRELD2Q6UXH1 353 aaPredicted RBP9.67□□□□□ -0.86
CCDC113-201ENST00000219299 ATP11CQ8NB49 1132 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 FBXO22Q8NEZ5 403 aa9.67□□□□□ -0.86
CCDC113-201ENST00000219299 UCMAQ8WVF2 138 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms