RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 ARMCX2Q7L311 632 aa17.79■□□□□ 0.44
USB1-201ENST00000219281 SHCBP1Q8NEM2 672 aa17.79■□□□□ 0.44
USB1-201ENST00000219281 SLC35F5Q8WV83 523 aa17.79■□□□□ 0.44
USB1-201ENST00000219281 XPNPEP3Q9NQH7 507 aa17.79■□□□□ 0.44
USB1-201ENST00000219281 PPM1HQ9ULR3 514 aa17.79■□□□□ 0.44
USB1-201ENST00000219281 SOX13Q9UN79 622 aa17.79■□□□□ 0.44
USB1-201ENST00000219281 A0A088AWK7 358 aa17.79■□□□□ 0.44
USB1-201ENST00000219281 VTNP04004 478 aa17.79■□□□□ 0.44
USB1-201ENST00000219281 ALDOAP04075 364 aaKnown RBP17.79■□□□□ 0.44
USB1-201ENST00000219281 UBTFL6P0CB48 400 aaPredicted RBP17.79■□□□□ 0.44
USB1-201ENST00000219281 INSRRP14616 1297 aa17.79■□□□□ 0.44
USB1-201ENST00000219281 ZFXP17010 805 aaPredicted RBP17.79■□□□□ 0.44
USB1-201ENST00000219281 AOC1P19801 751 aa17.79■□□□□ 0.44
USB1-201ENST00000219281 CNTFP26441 200 aa17.79■□□□□ 0.44
USB1-201ENST00000219281 TAPT1Q6NXT6 567 aa17.79■□□□□ 0.44
USB1-201ENST00000219281 POU5F2Q8N7G0 328 aa17.79■□□□□ 0.44
USB1-201ENST00000219281 MS4A4AQ96JQ5 239 aa17.79■□□□□ 0.44
USB1-201ENST00000219281 KCTD15Q96SI1 283 aaPredicted RBP17.79■□□□□ 0.44
USB1-201ENST00000219281 MTMR10Q9NXD2 777 aa17.79■□□□□ 0.44
USB1-201ENST00000219281 AP4E1Q9UPM8 1137 aa17.79■□□□□ 0.44
USB1-201ENST00000219281 C2CD2Q9Y426 696 aa17.79■□□□□ 0.44
USB1-201ENST00000219281 ARHGAP42A6NI28 874 aa17.78■□□□□ 0.44
USB1-201ENST00000219281 NR2C2P49116 596 aa17.78■□□□□ 0.44
USB1-201ENST00000219281 SARNPP82979 210 aaKnown RBP17.78■□□□□ 0.44
USB1-201ENST00000219281 DSG1Q02413 1049 aa17.78■□□□□ 0.44
USB1-201ENST00000219281 PDE1CQ14123 709 aaPredicted RBP17.78■□□□□ 0.44
USB1-201ENST00000219281 TTLL4Q14679 1199 aa17.78■□□□□ 0.44
USB1-201ENST00000219281 STEAP4Q687X5 459 aa17.78■□□□□ 0.44
USB1-201ENST00000219281 MAMDC4Q6UXC1 1216 aa17.78■□□□□ 0.44
USB1-201ENST00000219281 PACS1Q6VY07 963 aa17.78■□□□□ 0.44
USB1-201ENST00000219281 MARK2Q7KZI7 788 aaKnown RBP17.78■□□□□ 0.44
USB1-201ENST00000219281 TTC39CQ8N584 583 aa17.78■□□□□ 0.44
USB1-201ENST00000219281 GSTCDQ8NEC7 633 aa17.78■□□□□ 0.44
USB1-201ENST00000219281 IFT43Q96FT9 208 aa17.78■□□□□ 0.44
USB1-201ENST00000219281 CSPG4P5Q96PW8 444 aa17.78■□□□□ 0.44
USB1-201ENST00000219281 CXCL16Q9H2A7 254 aa17.78■□□□□ 0.44
USB1-201ENST00000219281 GPAMQ9HCL2 828 aa17.78■□□□□ 0.44
USB1-201ENST00000219281 DTLQ9NZJ0 730 aa17.78■□□□□ 0.44
USB1-201ENST00000219281 NME7Q9Y5B8 376 aa17.78■□□□□ 0.44
USB1-201ENST00000219281 SNX9Q9Y5X1 595 aa17.78■□□□□ 0.44
USB1-201ENST00000219281 ALDH1A2O94788 518 aa17.78■□□□□ 0.44
USB1-201ENST00000219281 VAV1P15498 845 aa17.78■□□□□ 0.44
USB1-201ENST00000219281 SESN2P58004 480 aaPredicted RBP17.78■□□□□ 0.44
USB1-201ENST00000219281 PDE1BQ01064 536 aa17.78■□□□□ 0.44
USB1-201ENST00000219281 ARHGAP1Q07960 439 aa17.78■□□□□ 0.44
USB1-201ENST00000219281 NIPAL4Q0D2K0 466 aa17.78■□□□□ 0.44
USB1-201ENST00000219281 HIC1Q14526 733 aa17.78■□□□□ 0.44
USB1-201ENST00000219281 ZNF792Q3KQV3 632 aa17.78■□□□□ 0.44
USB1-201ENST00000219281 RABGAP1LQ5R372 815 aa17.78■□□□□ 0.44
USB1-201ENST00000219281 STXBP5Q5T5C0 1151 aa17.78■□□□□ 0.44
USB1-201ENST00000219281 CCDC185Q8N715 623 aa17.78■□□□□ 0.44
USB1-201ENST00000219281 GPRC5AQ8NFJ5 357 aa17.78■□□□□ 0.44
USB1-201ENST00000219281 HTR3CQ8WXA8 447 aa17.78■□□□□ 0.44
USB1-201ENST00000219281 DDX50Q9BQ39 737 aaKnown RBP17.78■□□□□ 0.44
USB1-201ENST00000219281 ECSITQ9BQ95 431 aa17.78■□□□□ 0.44
USB1-201ENST00000219281 DDX43Q9NXZ2 648 aaKnown RBP17.78■□□□□ 0.44
USB1-201ENST00000219281 SORCS3Q9UPU3 1222 aa17.78■□□□□ 0.44
USB1-201ENST00000219281 APOBEC2Q9Y235 224 aaKnown RBP17.78■□□□□ 0.44
USB1-201ENST00000219281 ASB14A6NK59 587 aa17.77■□□□□ 0.44
USB1-201ENST00000219281 ZNF487B1APH4 448 aa17.77■□□□□ 0.44
USB1-201ENST00000219281 PPEF2O14830 753 aa17.77■□□□□ 0.44
USB1-201ENST00000219281 PLIN3O60664 434 aa17.77■□□□□ 0.44
USB1-201ENST00000219281 GLRA3O75311 464 aa17.77■□□□□ 0.44
USB1-201ENST00000219281 STAU1O95793 577 aaKnown RBP17.77■□□□□ 0.44
USB1-201ENST00000219281 PCLAFQ15004 111 aa17.77■□□□□ 0.44
USB1-201ENST00000219281 RALGPS1Q5JS13 557 aa17.77■□□□□ 0.44
USB1-201ENST00000219281 FOXB2Q5VYV0 432 aa17.77■□□□□ 0.44
USB1-201ENST00000219281 BSPRYQ5W0U4 402 aa17.77■□□□□ 0.44
USB1-201ENST00000219281 NCBP2-AS2Q69YL0 99 aa17.77■□□□□ 0.44
USB1-201ENST00000219281 SLC30A9Q6PML9 568 aa17.77■□□□□ 0.44
USB1-201ENST00000219281 ATG14Q6ZNE5 492 aa17.77■□□□□ 0.44
USB1-201ENST00000219281 CYS1Q717R9 158 aa17.77■□□□□ 0.44
USB1-201ENST00000219281 RSPH3Q86UC2 560 aa17.77■□□□□ 0.44
USB1-201ENST00000219281 PYROXD2Q8N2H3 581 aa17.77■□□□□ 0.44
USB1-201ENST00000219281 C7orf31Q8N865 590 aa17.77■□□□□ 0.44
USB1-201ENST00000219281 NETO2Q8NC67 525 aa17.77■□□□□ 0.44
USB1-201ENST00000219281 ACMSDQ8TDX5 336 aa17.77■□□□□ 0.44
USB1-201ENST00000219281 TFB1MQ8WVM0 346 aaKnown RBP17.77■□□□□ 0.44
USB1-201ENST00000219281 SIKE1Q9BRV8 207 aa17.77■□□□□ 0.44
USB1-201ENST00000219281 ZNF408Q9H9D4 720 aa17.77■□□□□ 0.44
USB1-201ENST00000219281 PAPOLBQ9NRJ5 636 aaKnown RBP17.77■□□□□ 0.44
USB1-201ENST00000219281 PNPOQ9NVS9 261 aa17.77■□□□□ 0.44
USB1-201ENST00000219281 ERAP1Q9NZ08 941 aa17.77■□□□□ 0.44
USB1-201ENST00000219281 PSAT1Q9Y617 370 aa17.77■□□□□ 0.44
USB1-201ENST00000219281 EVPLQ92817 2033 aa17.77■□□□□ 0.43
USB1-201ENST00000219281 PDHXO00330 501 aa17.77■□□□□ 0.43
USB1-201ENST00000219281 KIF3CO14782 793 aa17.77■□□□□ 0.43
USB1-201ENST00000219281 GOT1P17174 413 aa17.77■□□□□ 0.43
USB1-201ENST00000219281 MGAT1P26572 445 aa17.77■□□□□ 0.43
USB1-201ENST00000219281 PTPN9P43378 593 aa17.77■□□□□ 0.43
USB1-201ENST00000219281 DBN1Q16643 649 aa17.77■□□□□ 0.43
USB1-201ENST00000219281 GSTA3Q16772 222 aa17.77■□□□□ 0.43
USB1-201ENST00000219281 TMCO4Q5TGY1 634 aa17.77■□□□□ 0.43
USB1-201ENST00000219281 MAVSQ7Z434 540 aa17.77■□□□□ 0.43
USB1-201ENST00000219281 C10orf107Q8IVU9 208 aa17.77■□□□□ 0.43
USB1-201ENST00000219281 COLGALT1Q8NBJ5 622 aa17.77■□□□□ 0.43
USB1-201ENST00000219281 CDKL2Q92772 493 aa17.77■□□□□ 0.43
USB1-201ENST00000219281 LGMNQ99538 433 aa17.77■□□□□ 0.43
USB1-201ENST00000219281 DNAJB4Q9UDY4 337 aa17.77■□□□□ 0.43
USB1-201ENST00000219281 BTBD19C9JJ37 291 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms