RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 ITGB1P05556 798 aa10.3□□□□□ -0.76
USP11-201ENST00000218348 THP07101 528 aa10.3□□□□□ -0.76
USP11-201ENST00000218348 GNAT1P11488 350 aa10.3□□□□□ -0.76
USP11-201ENST00000218348 NCAM1P13591 858 aa10.3□□□□□ -0.76
USP11-201ENST00000218348 MSH2P43246 934 aa10.3□□□□□ -0.76
USP11-201ENST00000218348 OVGP1Q12889 678 aa10.3□□□□□ -0.76
USP11-201ENST00000218348 SV2CQ496J9 727 aa10.3□□□□□ -0.76
USP11-201ENST00000218348 MFSD5Q6N075 450 aa10.3□□□□□ -0.76
USP11-201ENST00000218348 AGGF1Q8N302 714 aaeCLIP10.3□□□□□ -0.76
USP11-201ENST00000218348 ANKLE1Q8NAG6 615 aa10.3□□□□□ -0.76
USP11-201ENST00000218348 RNF34Q969K3 372 aa10.3□□□□□ -0.76
USP11-201ENST00000218348 CLIP3Q96DZ5 547 aa10.3□□□□□ -0.76
USP11-201ENST00000218348 CRTAC1Q9NQ79 661 aa10.3□□□□□ -0.76
USP11-201ENST00000218348 FARP1Q9Y4F1 1045 aaPredicted RBP10.3□□□□□ -0.76
USP11-201ENST00000218348 IKBKGQ9Y6K9 419 aa10.3□□□□□ -0.76
USP11-201ENST00000218348 FAM72CH0Y354 149 aa10.29□□□□□ -0.76
USP11-201ENST00000218348 DESP17661 470 aa10.29□□□□□ -0.76
USP11-201ENST00000218348 BDNFP23560 247 aa10.29□□□□□ -0.76
USP11-201ENST00000218348 L1CAMP32004 1257 aa10.29□□□□□ -0.76
USP11-201ENST00000218348 PAPOLAP51003 745 aaKnown RBP10.29□□□□□ -0.76
USP11-201ENST00000218348 SLC8A3P57103 927 aa10.29□□□□□ -0.76
USP11-201ENST00000218348 FAM72AQ5TYM5 149 aa10.29□□□□□ -0.76
USP11-201ENST00000218348 FAM72DQ6L9T8 149 aa10.29□□□□□ -0.76
USP11-201ENST00000218348 PAQR9Q6ZVX9 377 aa10.29□□□□□ -0.76
USP11-201ENST00000218348 FAM72BQ86X60 149 aa10.29□□□□□ -0.76
USP11-201ENST00000218348 GSTCDQ8NEC7 633 aa10.29□□□□□ -0.76
USP11-201ENST00000218348 CCHCR1Q8TD31 782 aa10.29□□□□□ -0.76
USP11-201ENST00000218348 PCED1BQ96HM7 432 aa10.29□□□□□ -0.76
USP11-201ENST00000218348 TNIP3Q96KP6 325 aa10.29□□□□□ -0.76
USP11-201ENST00000218348 CSPG4P5Q96PW8 444 aa10.29□□□□□ -0.76
USP11-201ENST00000218348 APOL2Q9BQE5 337 aa10.29□□□□□ -0.76
USP11-201ENST00000218348 MTG1Q9BT17 334 aaPredicted RBP10.29□□□□□ -0.76
USP11-201ENST00000218348 SLC13A1Q9BZW2 595 aa10.29□□□□□ -0.76
USP11-201ENST00000218348 BRD8Q9H0E9 1235 aa10.29□□□□□ -0.76
USP11-201ENST00000218348 USP29Q9HBJ7 922 aa10.29□□□□□ -0.76
USP11-201ENST00000218348 PAPOLBQ9NRJ5 636 aaKnown RBP10.29□□□□□ -0.76
USP11-201ENST00000218348 UBP1Q9NZI7 540 aa10.29□□□□□ -0.76
USP11-201ENST00000218348 PADI3Q9ULW8 664 aa10.29□□□□□ -0.76
USP11-201ENST00000218348 SHOC2Q9UQ13 582 aa10.29□□□□□ -0.76
USP11-201ENST00000218348 CHD9Q3L8U1 2897 aa10.29□□□□□ -0.76
USP11-201ENST00000218348 XPOTO43592 962 aaKnown RBP10.29□□□□□ -0.76
USP11-201ENST00000218348 TOP3BO95985 862 aaKnown RBP10.29□□□□□ -0.76
USP11-201ENST00000218348 GMPRP36959 345 aa10.29□□□□□ -0.76
USP11-201ENST00000218348 CLCN2P51788 898 aa10.29□□□□□ -0.76
USP11-201ENST00000218348 RNASELQ05823 741 aaKnown RBP10.29□□□□□ -0.76
USP11-201ENST00000218348 DRICH1Q6PGQ1 229 aaPredicted RBP10.29□□□□□ -0.76
USP11-201ENST00000218348 CLEC20AQ6ZU45 233 aa10.29□□□□□ -0.76
USP11-201ENST00000218348 ANKRD33Q7Z3H0 272 aa10.29□□□□□ -0.76
USP11-201ENST00000218348 NT5DC4Q86YG4 428 aa10.29□□□□□ -0.76
USP11-201ENST00000218348 FAM126BQ8IXS8 530 aa10.29□□□□□ -0.76
USP11-201ENST00000218348 MAML1Q92585 1016 aa10.29□□□□□ -0.76
USP11-201ENST00000218348 ATXN7L3BQ96GX2 97 aa10.29□□□□□ -0.76
USP11-201ENST00000218348 ADAM2Q99965 735 aa10.29□□□□□ -0.76
USP11-201ENST00000218348 RABGEF1Q9UJ41 708 aa10.29□□□□□ -0.76
USP11-201ENST00000218348 GRID1Q9ULK0 1009 aa10.29□□□□□ -0.76
USP11-201ENST00000218348 CXorf49A8MYA2 514 aaPredicted RBP10.28□□□□□ -0.76
USP11-201ENST00000218348 SRGAP2BP0DMP2 458 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 ADRA1DP25100 572 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 ATP5DP30049 168 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 YWHAZP63104 245 aaKnown RBP10.28□□□□□ -0.76
USP11-201ENST00000218348 DEUP1Q05D60 604 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 FAAP100Q0VG06 881 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 TIGD5Q53EQ6 642 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 TRABD2AQ86V40 505 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 SERINC5Q86VE9 423 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 ATP11CQ8NB49 1132 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 SYT15Q9BQS2 421 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 TMEM109Q9BVC6 243 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 SPC25Q9HBM1 224 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 ANLNQ9NQW6 1124 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 PIGVQ9NUD9 493 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 HAUS2Q9NVX0 235 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 SLC17A7Q9P2U7 560 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 PRG3Q9Y2Y8 225 aaPredicted RBP10.28□□□□□ -0.76
USP11-201ENST00000218348 TCRBV9S1A1TA0A576 114 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 FAM47DPA6NHR8 397 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 MFSD11O43934 449 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 NPR3P17342 541 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 ARL4AP40617 200 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 ABCG1P45844 678 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 ARPP19P56211 112 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 TRMT10BQ6PF06 316 aaKnown RBP10.28□□□□□ -0.76
USP11-201ENST00000218348 LVRNQ6Q4G3 990 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 AGMOQ6ZNB7 445 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 ARHGEF18Q6ZSZ5 1173 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 KDELC2Q7Z4H8 507 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 KIF2BQ8N4N8 673 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 PDCD7Q8N8D1 485 aaKnown RBP10.28□□□□□ -0.76
USP11-201ENST00000218348 SCAMP5Q8TAC9 235 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 GPR152Q8TDT2 470 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 USP33Q8TEY7 942 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 RSRC1Q96IZ7 334 aaKnown RBP10.28□□□□□ -0.76
USP11-201ENST00000218348 CELF6Q96J87 481 aaKnown RBP10.28□□□□□ -0.76
USP11-201ENST00000218348 KATNAL1Q9BW62 490 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 DDIT4Q9NX09 232 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 DCTN4Q9UJW0 460 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 FAM200BP0CF97 657 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 GEMIN4P57678 1058 aaKnown RBP10.28□□□□□ -0.76
USP11-201ENST00000218348 STILQ15468 1287 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 FAM26DQ5JW98 314 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms