RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 IRAK2O43187 625 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 CXCL10P02778 98 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 MX2P20592 715 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 FGFR3P22607 806 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 SSTR1P30872 391 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 ELK3P41970 407 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 SLC11A1P49279 550 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 SEMA5AQ13591 1074 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 TMED2Q15363 201 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 FAXCQ5TGI0 409 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 FAM72AQ5TYM5 149 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 FAM72DQ6L9T8 149 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 SLC39A5Q6ZMH5 540 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 MON1AQ86VX9 555 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 FAM72BQ86X60 149 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 CCDC33Q8N5R6 958 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 MDM1Q8TC05 714 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 LRRN4Q8WUT4 740 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 LRRC39Q96DD0 335 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 XPO6Q96QU8 1125 aaKnown RBP17.95■□□□□ 0.46
VRK1-201ENST00000216639 ACSS3Q9H6R3 686 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 ANLNQ9NQW6 1124 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 EURLQ9NYK6 297 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 SENP1Q9P0U3 644 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 PSMC3IPQ9P2W1 217 aaPredicted RBP17.95■□□□□ 0.46
VRK1-201ENST00000216639 CHMP2BQ9UQN3 213 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 SCML2Q9UQR0 700 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 TEX264Q9Y6I9 313 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 MTSS1O43312 755 aa17.94■□□□□ 0.46
VRK1-201ENST00000216639 METTL18O95568 372 aa17.94■□□□□ 0.46
VRK1-201ENST00000216639 VAV1P15498 845 aa17.94■□□□□ 0.46
VRK1-201ENST00000216639 CCR1P32246 355 aa17.94■□□□□ 0.46
VRK1-201ENST00000216639 HTR7P34969 479 aa17.94■□□□□ 0.46
VRK1-201ENST00000216639 GATMP50440 423 aa17.94■□□□□ 0.46
VRK1-201ENST00000216639 ATN1P54259 1190 aaPredicted RBP17.94■□□□□ 0.46
VRK1-201ENST00000216639 CDK16Q00536 496 aa17.94■□□□□ 0.46
VRK1-201ENST00000216639 FUT10Q6P4F1 479 aa17.94■□□□□ 0.46
VRK1-201ENST00000216639 LRRC43Q8N309 656 aa17.94■□□□□ 0.46
VRK1-201ENST00000216639 P2RY11Q96G91 374 aa17.94■□□□□ 0.46
VRK1-201ENST00000216639 SCLYQ96I15 445 aa17.94■□□□□ 0.46
VRK1-201ENST00000216639 TOX2Q96NM4 488 aa17.94■□□□□ 0.46
VRK1-201ENST00000216639 HAPLN3Q96S86 360 aa17.94■□□□□ 0.46
VRK1-201ENST00000216639 GPR62Q9BZJ7 368 aa17.94■□□□□ 0.46
VRK1-201ENST00000216639 PRDM12Q9H4Q4 367 aa17.94■□□□□ 0.46
VRK1-201ENST00000216639 XAB2Q9HCS7 855 aaKnown RBP17.94■□□□□ 0.46
VRK1-201ENST00000216639 ARHGEF38Q9NXL2 777 aa17.94■□□□□ 0.46
VRK1-201ENST00000216639 RABGEF1Q9UJ41 708 aa17.94■□□□□ 0.46
VRK1-201ENST00000216639 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.93■□□□□ 0.46
VRK1-201ENST00000216639 RASA4BC9J798 803 aa17.93■□□□□ 0.46
VRK1-201ENST00000216639 I6L893 689 aaPredicted RBP17.93■□□□□ 0.46
VRK1-201ENST00000216639 RNF103O00237 685 aa17.93■□□□□ 0.46
VRK1-201ENST00000216639 RASA4O43374 803 aa17.93■□□□□ 0.46
VRK1-201ENST00000216639 BRAFP15056 766 aa17.93■□□□□ 0.46
VRK1-201ENST00000216639 CPB1P15086 417 aa17.93■□□□□ 0.46
VRK1-201ENST00000216639 EPHB2P29323 1055 aa17.93■□□□□ 0.46
VRK1-201ENST00000216639 CCL23P55773 120 aa17.93■□□□□ 0.46
VRK1-201ENST00000216639 SYCP2LQ5T4T6 812 aa17.93■□□□□ 0.46
VRK1-201ENST00000216639 NLRP14Q86W24 1093 aa17.93■□□□□ 0.46
VRK1-201ENST00000216639 SPPL2BQ8TCT7 592 aa17.93■□□□□ 0.46
VRK1-201ENST00000216639 FBF1Q8TES7 1133 aa17.93■□□□□ 0.46
VRK1-201ENST00000216639 SERPINB11Q96P15 392 aa17.93■□□□□ 0.46
VRK1-201ENST00000216639 CYTH2Q99418 400 aa17.93■□□□□ 0.46
VRK1-201ENST00000216639 KCNK9Q9NPC2 374 aa17.93■□□□□ 0.46
VRK1-201ENST00000216639 MARCH5Q9NX47 278 aa17.93■□□□□ 0.46
VRK1-201ENST00000216639 DNAH12Q6ZR08 3092 aa17.93■□□□□ 0.46
VRK1-201ENST00000216639 FAM107AO95990 144 aa17.92■□□□□ 0.46
VRK1-201ENST00000216639 GALTP07902 379 aa17.92■□□□□ 0.46
VRK1-201ENST00000216639 KRT15P19012 456 aa17.92■□□□□ 0.46
VRK1-201ENST00000216639 GCAP28676 217 aa17.92■□□□□ 0.46
VRK1-201ENST00000216639 STX2P32856 288 aa17.92■□□□□ 0.46
VRK1-201ENST00000216639 HNRNPH2P55795 449 aaKnown RBP17.92■□□□□ 0.46
VRK1-201ENST00000216639 PPARDQ03181 441 aa17.92■□□□□ 0.46
VRK1-201ENST00000216639 EIF4EBP2Q13542 120 aaPredicted RBP17.92■□□□□ 0.46
VRK1-201ENST00000216639 PPP2R5DQ14738 602 aa17.92■□□□□ 0.46
VRK1-201ENST00000216639 DDR2Q16832 855 aa17.92■□□□□ 0.46
VRK1-201ENST00000216639 DENND5BQ6ZUT9 1274 aa17.92■□□□□ 0.46
VRK1-201ENST00000216639 ANKS3Q6ZW76 656 aa17.92■□□□□ 0.46
VRK1-201ENST00000216639 SCD5Q86SK9 330 aa17.92■□□□□ 0.46
VRK1-201ENST00000216639 SRRM1Q8IYB3 904 aaKnown RBP17.92■□□□□ 0.46
VRK1-201ENST00000216639 CYP4X1Q8N118 509 aa17.92■□□□□ 0.46
VRK1-201ENST00000216639 CRIPAKQ8N1N5 446 aa17.92■□□□□ 0.46
VRK1-201ENST00000216639 COLGALT1Q8NBJ5 622 aa17.92■□□□□ 0.46
VRK1-201ENST00000216639 MAML1Q92585 1016 aa17.92■□□□□ 0.46
VRK1-201ENST00000216639 PGLYRP2Q96PD5 576 aa17.92■□□□□ 0.46
VRK1-201ENST00000216639 WDR83Q9BRX9 315 aaKnown RBP17.92■□□□□ 0.46
VRK1-201ENST00000216639 PPP1R12CQ9BZL4 782 aa17.92■□□□□ 0.46
VRK1-201ENST00000216639 EIF2B3Q9NR50 452 aaKnown RBP17.92■□□□□ 0.46
VRK1-201ENST00000216639 SEPT10Q9P0V9 454 aa17.92■□□□□ 0.46
VRK1-201ENST00000216639 TANC1Q9C0D5 1861 aa17.92■□□□□ 0.46
VRK1-201ENST00000216639 A0A1W2PQH9 124 aa17.92■□□□□ 0.46
VRK1-201ENST00000216639 TMEM120BA0PK00 339 aa17.92■□□□□ 0.46
VRK1-201ENST00000216639 LRIG2O94898 1065 aa17.92■□□□□ 0.46
VRK1-201ENST00000216639 RTN3O95197 1032 aaPredicted RBP17.92■□□□□ 0.46
VRK1-201ENST00000216639 GSTA2P09210 222 aa17.92■□□□□ 0.46
VRK1-201ENST00000216639 MSH2P43246 934 aa17.92■□□□□ 0.46
VRK1-201ENST00000216639 ARPP19P56211 112 aa17.92■□□□□ 0.46
VRK1-201ENST00000216639 PPIDQ08752 370 aaKnown RBP17.92■□□□□ 0.46
VRK1-201ENST00000216639 FAAP100Q0VG06 881 aa17.92■□□□□ 0.46
VRK1-201ENST00000216639 GPR17Q13304 367 aa17.92■□□□□ 0.46
VRK1-201ENST00000216639 PARP6Q2NL67 630 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms