RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 DNAJC1Q96KC8 554 aaKnown RBP10.69□□□□□ -0.7
VCL-201ENST00000211998 SLCO1B3Q9NPD5 702 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.69□□□□□ -0.7
VCL-201ENST00000211998 PRMT7Q9NVM4 692 aaPredicted RBP10.69□□□□□ -0.7
VCL-201ENST00000211998 NCKIPSDQ9NZQ3 722 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 SHOC2Q9UQ13 582 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 SNX9Q9Y5X1 595 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 SNTNA6NMZ2 147 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 PGK2P07205 417 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 ELK3P41970 407 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 ATP12AP54707 1039 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 PRKAA1Q13131 559 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 PDK1Q15118 436 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 TUBA3EQ6PEY2 450 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 ZDHHC13Q8IUH4 622 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 DRAXINQ8NBI3 349 aaPredicted RBP10.69□□□□□ -0.7
VCL-201ENST00000211998 GSTCDQ8NEC7 633 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 ZHX1-C8orf76Q96EF9 292 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 DLC1Q96QB1 1528 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 PI4K2AQ9BTU6 479 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 OSBPL10Q9BXB5 764 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 MARCH7Q9H992 704 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 DUSP12Q9UNI6 340 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 ZC3H4Q9UPT8 1303 aaKnown RBP10.69□□□□□ -0.7
VCL-201ENST00000211998 EIF3LQ9Y262 564 aaKnown RBP10.69□□□□□ -0.7
VCL-201ENST00000211998 ACTL7BQ9Y614 415 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 AGRPO00253 132 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 GRIN3BO60391 1043 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 TADA2AO75478 443 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 NDUFS3O75489 264 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 NADKO95544 446 aaPredicted RBP10.69□□□□□ -0.7
VCL-201ENST00000211998 NUDT17P0C025 328 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 ZNF12P17014 697 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 MAGP20916 626 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 AMPD2Q01433 879 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 EPS8Q12929 822 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 STRA8Q7Z7C7 330 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 AMIGO2Q86SJ2 522 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 SCAIQ8N9R8 606 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 TUBGCP5Q96RT8 1024 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 MXRA8Q9BRK3 442 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 SPATA16Q9BXB7 569 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 TMEM8AQ9HCN3 771 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 UBA2Q9UBT2 640 aaPredicted RBP10.69□□□□□ -0.7
VCL-201ENST00000211998 ZNF222Q9UK12 451 aa10.69□□□□□ -0.7
VCL-201ENST00000211998 TTLL13PA6NNM8 815 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 NOTOA8MTQ0 251 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 ZBTB11O95625 1053 aaPredicted RBP10.68□□□□□ -0.7
VCL-201ENST00000211998 FDFT1P37268 417 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 ST8SIA6P61647 398 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 EN1Q05925 392 aaPredicted RBP10.68□□□□□ -0.7
VCL-201ENST00000211998 UBAP2LQ14157 1087 aaKnown RBP10.68□□□□□ -0.7
VCL-201ENST00000211998 ZIK1Q3SY52 487 aaPredicted RBP10.68□□□□□ -0.7
VCL-201ENST00000211998 GPAT2Q6NUI2 795 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 GALNT18Q6P9A2 607 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 SLCO6A1Q86UG4 719 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 ATPAF2Q8N5M1 289 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 AVENQ9NQS1 362 aaPredicted RBP10.68□□□□□ -0.7
VCL-201ENST00000211998 CHST12Q9NRB3 414 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 ANKEF1Q9NU02 776 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 TRMT13Q9NUP7 481 aaKnown RBP10.68□□□□□ -0.7
VCL-201ENST00000211998 ARL8BQ9NVJ2 186 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 ZNF224Q9NZL3 707 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 CRNNQ9UBG3 495 aaPredicted RBP10.68□□□□□ -0.7
VCL-201ENST00000211998 VTI1BQ9UEU0 232 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 PKP3Q9Y446 797 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 ABCA6Q8N139 1617 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 CD163L1Q9NR16 1453 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 IGSF9BQ9UPX0 1349 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 KRT87PA6NCN2 255 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 UBE2Q2LH0YL09 131 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 C2CD2LO14523 706 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 AREL1O15033 823 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 VCLP18206 1134 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 PCSK1P29120 753 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 RRM2P31350 389 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 ACOT2P49753 483 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 PDCD4Q53EL6 469 aaKnown RBP10.68□□□□□ -0.7
VCL-201ENST00000211998 NT5DC1Q5TFE4 455 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 SPOCD1Q6ZMY3 1216 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 AHI1Q8N157 1196 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 EXD1Q8NHP7 514 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 TMEM143Q96AN5 459 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 GPATCH1Q9BRR8 931 aaKnown RBP10.68□□□□□ -0.7
VCL-201ENST00000211998 SNX8Q9Y5X2 465 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 CNTNAP4Q9C0A0 1308 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 CAPN8A6NHC0 703 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 RRN3P2A6NIE6 340 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 RASA1P20936 1047 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 GPD1P21695 349 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 MAGEA10P43363 369 aaPredicted RBP10.68□□□□□ -0.7
VCL-201ENST00000211998 SLC16A1P53985 500 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 SPIRE1Q08AE8 756 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 TRAP1Q12931 704 aaKnown RBP10.68□□□□□ -0.7
VCL-201ENST00000211998 PTK6Q13882 451 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 IPMKQ8NFU5 416 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 UCMAQ8WVF2 138 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 TSEN34Q9BSV6 310 aaKnown RBP10.68□□□□□ -0.7
VCL-201ENST00000211998 S100A14Q9HCY8 104 aa10.68□□□□□ -0.7
VCL-201ENST00000211998 CCDC167Q9P0B6 97 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms