RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 SPATA20Q8TB22 786 aa19.3■□□□□ 0.68
MBD3-201ENST00000156825 VCPIP1Q96JH7 1222 aa19.3■□□□□ 0.68
MBD3-201ENST00000156825 SENP6Q9GZR1 1112 aaPredicted RBP19.3■□□□□ 0.68
MBD3-201ENST00000156825 ARMCX1Q9P291 453 aa19.3■□□□□ 0.68
MBD3-201ENST00000156825 KANSL3Q9P2N6 904 aa19.3■□□□□ 0.68
MBD3-201ENST00000156825 TMEM131LA2VDJ0 1609 aa19.3■□□□□ 0.68
MBD3-201ENST00000156825 LRRC10BA6NIK2 292 aa19.29■□□□□ 0.68
MBD3-201ENST00000156825 ALBP02768 609 aa19.29■□□□□ 0.68
MBD3-201ENST00000156825 RENBPP51606 427 aa19.29■□□□□ 0.68
MBD3-201ENST00000156825 ELAVL2Q12926 359 aaKnown RBP19.29■□□□□ 0.68
MBD3-201ENST00000156825 ZBTB17Q13105 803 aa19.29■□□□□ 0.68
MBD3-201ENST00000156825 ZNF786Q8N393 782 aa19.29■□□□□ 0.68
MBD3-201ENST00000156825 A0A096LPK6 155 aa19.29■□□□□ 0.68
MBD3-201ENST00000156825 PAEPP09466 180 aa19.29■□□□□ 0.68
MBD3-201ENST00000156825 PLD1Q13393 1074 aa19.29■□□□□ 0.68
MBD3-201ENST00000156825 ATP6AP1LQ52LC2 224 aa19.29■□□□□ 0.68
MBD3-201ENST00000156825 IQSEC1Q6DN90 963 aa19.29■□□□□ 0.68
MBD3-201ENST00000156825 ZNF410Q86VK4 478 aa19.29■□□□□ 0.68
MBD3-201ENST00000156825 SCUBE1Q8IWY4 988 aa19.29■□□□□ 0.68
MBD3-201ENST00000156825 TRPV2Q9Y5S1 764 aa19.29■□□□□ 0.68
MBD3-201ENST00000156825 C16orf96A6NNT2 1141 aa19.29■□□□□ 0.68
MBD3-201ENST00000156825 PHGDHO43175 533 aaKnown RBP19.29■□□□□ 0.68
MBD3-201ENST00000156825 OOSP2Q86WS3 158 aa19.29■□□□□ 0.68
MBD3-201ENST00000156825 LNX1Q8TBB1 728 aaPredicted RBP19.29■□□□□ 0.68
MBD3-201ENST00000156825 PLSCR1O15162 318 aa19.29■□□□□ 0.68
MBD3-201ENST00000156825 ZC3H12AQ5D1E8 599 aaKnown RBP19.29■□□□□ 0.68
MBD3-201ENST00000156825 DEPDC1Q5TB30 811 aa19.29■□□□□ 0.68
MBD3-201ENST00000156825 EEF1DP3Q658K8 133 aa19.29■□□□□ 0.68
MBD3-201ENST00000156825 MICU2Q8IYU8 434 aa19.29■□□□□ 0.68
MBD3-201ENST00000156825 C12orf29Q8N999 325 aa19.29■□□□□ 0.68
MBD3-201ENST00000156825 CDT1Q9H211 546 aa19.29■□□□□ 0.68
MBD3-201ENST00000156825 SYTL2Q9HCH5 934 aa19.29■□□□□ 0.68
MBD3-201ENST00000156825 UBIAD1Q9Y5Z9 338 aa19.29■□□□□ 0.68
MBD3-201ENST00000156825 NCAM2O15394 837 aa19.29■□□□□ 0.68
MBD3-201ENST00000156825 SMNDC1O75940 238 aaKnown RBP eCLIP19.29■□□□□ 0.68
MBD3-201ENST00000156825 RBP1P09455 135 aa19.29■□□□□ 0.68
MBD3-201ENST00000156825 CCDC126Q96EE4 140 aa19.29■□□□□ 0.68
MBD3-201ENST00000156825 ELOVL6Q9H5J4 265 aa19.29■□□□□ 0.68
MBD3-201ENST00000156825 H2AFY2Q9P0M6 372 aaPredicted RBP19.29■□□□□ 0.68
MBD3-201ENST00000156825 ERVK-10P10266 1014 aa19.28■□□□□ 0.68
MBD3-201ENST00000156825 POU1F1P28069 291 aa19.28■□□□□ 0.68
MBD3-201ENST00000156825 GP5P40197 560 aa19.28■□□□□ 0.68
MBD3-201ENST00000156825 MMP14P50281 582 aa19.28■□□□□ 0.68
MBD3-201ENST00000156825 TCEA2Q15560 299 aa19.28■□□□□ 0.68
MBD3-201ENST00000156825 SDHAF4Q5VUM1 108 aa19.28■□□□□ 0.68
MBD3-201ENST00000156825 PDPK2PQ6A1A2 396 aa19.28■□□□□ 0.68
MBD3-201ENST00000156825 RETSATQ6NUM9 610 aa19.28■□□□□ 0.68
MBD3-201ENST00000156825 MAGED4Q96JG8 741 aa19.28■□□□□ 0.68
MBD3-201ENST00000156825 POPDC2Q9HBU9 364 aa19.28■□□□□ 0.68
MBD3-201ENST00000156825 HMX1Q9NP08 348 aaPredicted RBP19.28■□□□□ 0.68
MBD3-201ENST00000156825 MAN1A2O60476 641 aa19.28■□□□□ 0.68
MBD3-201ENST00000156825 KRT16P08779 473 aa19.28■□□□□ 0.68
MBD3-201ENST00000156825 SPATA31C1P0DKV0 1188 aa19.28■□□□□ 0.68
MBD3-201ENST00000156825 PTPN1P18031 435 aaKnown RBP19.28■□□□□ 0.68
MBD3-201ENST00000156825 PSMA4P25789 261 aaKnown RBP19.28■□□□□ 0.68
MBD3-201ENST00000156825 RAB27AP51159 221 aa19.28■□□□□ 0.68
MBD3-201ENST00000156825 DNAJC14Q6Y2X3 702 aaPredicted RBP19.28■□□□□ 0.68
MBD3-201ENST00000156825 PWWP2AQ96N64 755 aa19.28■□□□□ 0.68
MBD3-201ENST00000156825 RGS18Q9NS28 235 aa19.28■□□□□ 0.68
MBD3-201ENST00000156825 TBC1D13Q9NVG8 400 aa19.28■□□□□ 0.68
MBD3-201ENST00000156825 H2AFYO75367 372 aaKnown RBP19.28■□□□□ 0.68
MBD3-201ENST00000156825 ZNF682O95780 498 aa19.28■□□□□ 0.68
MBD3-201ENST00000156825 SP100P23497 879 aaPredicted RBP19.28■□□□□ 0.68
MBD3-201ENST00000156825 KDELR1P24390 212 aa19.28■□□□□ 0.68
MBD3-201ENST00000156825 CENPAP49450 140 aa19.28■□□□□ 0.68
MBD3-201ENST00000156825 CCL23P55773 120 aa19.28■□□□□ 0.68
MBD3-201ENST00000156825 TTC33Q6PID6 262 aaPredicted RBP19.28■□□□□ 0.68
MBD3-201ENST00000156825 BNC2Q6ZN30 1099 aaPredicted RBP19.28■□□□□ 0.68
MBD3-201ENST00000156825 HERC6Q8IVU3 1022 aa19.28■□□□□ 0.68
MBD3-201ENST00000156825 MED8Q96G25 268 aa19.28■□□□□ 0.68
MBD3-201ENST00000156825 MEI4A8MW99 385 aa19.28■□□□□ 0.68
MBD3-201ENST00000156825 STAU1O95793 577 aaKnown RBP19.28■□□□□ 0.68
MBD3-201ENST00000156825 VHLP40337 213 aa19.28■□□□□ 0.68
MBD3-201ENST00000156825 CLK1P49759 484 aaKnown RBP19.28■□□□□ 0.68
MBD3-201ENST00000156825 GTF2BQ00403 316 aa19.28■□□□□ 0.68
MBD3-201ENST00000156825 MMRN1Q13201 1228 aa19.28■□□□□ 0.68
MBD3-201ENST00000156825 MAMLD1Q13495 774 aa19.28■□□□□ 0.68
MBD3-201ENST00000156825 TRIM60Q495X7 471 aa19.28■□□□□ 0.68
MBD3-201ENST00000156825 TMEM237Q96Q45 408 aa19.28■□□□□ 0.68
MBD3-201ENST00000156825 ADRA1DP25100 572 aa19.27■□□□□ 0.68
MBD3-201ENST00000156825 RPL7AP62424 266 aaKnown RBP19.27■□□□□ 0.68
MBD3-201ENST00000156825 SERPINB11Q96P15 392 aa19.27■□□□□ 0.68
MBD3-201ENST00000156825 AVENQ9NQS1 362 aaPredicted RBP19.27■□□□□ 0.68
MBD3-201ENST00000156825 SOX13Q9UN79 622 aa19.27■□□□□ 0.68
MBD3-201ENST00000156825 MGAT4DA6NG13 374 aa19.27■□□□□ 0.68
MBD3-201ENST00000156825 AGRPO00253 132 aa19.27■□□□□ 0.68
MBD3-201ENST00000156825 BANF1O75531 89 aa19.27■□□□□ 0.68
MBD3-201ENST00000156825 CCDC15Q0P6D6 951 aa19.27■□□□□ 0.68
MBD3-201ENST00000156825 TRMT11Q7Z4G4 463 aaKnown RBP19.27■□□□□ 0.68
MBD3-201ENST00000156825 DEFB107AQ8IZN7 70 aa19.27■□□□□ 0.68
MBD3-201ENST00000156825 ELOVL4Q9GZR5 314 aa19.27■□□□□ 0.68
MBD3-201ENST00000156825 BLOC1S6Q9UL45 172 aa19.27■□□□□ 0.68
MBD3-201ENST00000156825 NCALDP61601 193 aa19.27■□□□□ 0.68
MBD3-201ENST00000156825 ALDH6A1Q02252 535 aaKnown RBP19.27■□□□□ 0.68
MBD3-201ENST00000156825 DPYSL3Q14195 570 aa19.27■□□□□ 0.68
MBD3-201ENST00000156825 DDX28Q9NUL7 540 aaKnown RBP19.27■□□□□ 0.68
MBD3-201ENST00000156825 OR12D3Q9UGF7 316 aa19.27■□□□□ 0.68
MBD3-201ENST00000156825 ALDH1A2O94788 518 aa19.27■□□□□ 0.67
MBD3-201ENST00000156825 SLC2A4P14672 509 aa19.27■□□□□ 0.67
MBD3-201ENST00000156825 LLGL2Q6P1M3 1020 aa19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms