RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 ARMC2Q8NEN0 867 aa11.69□□□□□ -0.54
PKP2-201ENST00000070846 TMEM159Q96B96 161 aa11.69□□□□□ -0.54
PKP2-201ENST00000070846 TCF25Q9BQ70 676 aa11.69□□□□□ -0.54
PKP2-201ENST00000070846 B3GNT5Q9BYG0 378 aa11.69□□□□□ -0.54
PKP2-201ENST00000070846 POLR1EQ9GZS1 481 aaKnown RBP11.69□□□□□ -0.54
PKP2-201ENST00000070846 WWP1Q9H0M0 922 aa11.69□□□□□ -0.54
PKP2-201ENST00000070846 CYP4F12Q9HCS2 524 aa11.69□□□□□ -0.54
PKP2-201ENST00000070846 CNGB3Q9NQW8 809 aa11.69□□□□□ -0.54
PKP2-201ENST00000070846 SAE1Q9UBE0 346 aaPredicted RBP11.69□□□□□ -0.54
PKP2-201ENST00000070846 SIGLEC16A6NMB1 481 aa11.69□□□□□ -0.54
PKP2-201ENST00000070846 TCP11X1B4DZS4 312 aa11.69□□□□□ -0.54
PKP2-201ENST00000070846 IGF2BP3O00425 579 aaKnown RBP eCLIP11.69□□□□□ -0.54
PKP2-201ENST00000070846 BUD23O43709 281 aaKnown RBP11.69□□□□□ -0.54
PKP2-201ENST00000070846 CTSEP14091 401 aa11.69□□□□□ -0.54
PKP2-201ENST00000070846 SOX11P35716 441 aa11.69□□□□□ -0.54
PKP2-201ENST00000070846 ARL2P36404 184 aa11.69□□□□□ -0.54
PKP2-201ENST00000070846 STRA8Q7Z7C7 330 aa11.69□□□□□ -0.54
PKP2-201ENST00000070846 FAM71AQ8IYT1 594 aa11.69□□□□□ -0.54
PKP2-201ENST00000070846 FLCNQ8NFG4 579 aa11.69□□□□□ -0.54
PKP2-201ENST00000070846 TEPSINQ96N21 525 aa11.69□□□□□ -0.54
PKP2-201ENST00000070846 ISCUQ9H1K1 167 aa11.69□□□□□ -0.54
PKP2-201ENST00000070846 BCAS3Q9H6U6 928 aa11.69□□□□□ -0.54
PKP2-201ENST00000070846 ARL5CA6NH57 179 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 ERI2A8K979 691 aaKnown RBP11.68□□□□□ -0.54
PKP2-201ENST00000070846 ANGPT2O15123 496 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 TMEM259Q4ZIN3 620 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 HYIQ5T013 277 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 C1orf127Q8N9H9 656 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 GPAMQ9HCL2 828 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 FAM153AQ9UHL3 310 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 RNF112Q9ULX5 631 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.68□□□□□ -0.54
PKP2-201ENST00000070846 A0A1B0GUA9 196 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 LRRC10BA6NIK2 292 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 ANKRD65E5RJM6 399 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 EPHB6O15197 1021 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 TIMM44O43615 452 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 VAPBO95292 243 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 EEF1B2P24534 225 aaKnown RBP11.68□□□□□ -0.54
PKP2-201ENST00000070846 RFX3P48380 749 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 AARSP49588 968 aaKnown RBP eCLIP11.68□□□□□ -0.54
PKP2-201ENST00000070846 GUCY1A3Q02108 690 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 BTKQ06187 659 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 ACAP1Q15027 740 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 SETMARQ53H47 684 aaPredicted RBP11.68□□□□□ -0.54
PKP2-201ENST00000070846 TMEM63BQ5T3F8 832 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 VSTM1Q6UX27 236 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 TRAPPC5Q8IUR0 188 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 SYTL1Q8IYJ3 562 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 ING5Q8WYH8 240 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 UNKQ9C0B0 810 aaKnown RBP11.68□□□□□ -0.54
PKP2-201ENST00000070846 ZCCHC2Q9C0B9 1178 aaKnown RBP11.68□□□□□ -0.54
PKP2-201ENST00000070846 C10orf88Q9H8K7 445 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 AASDHPPTQ9NRN7 309 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 RNF186Q9NXI6 227 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 DEC1Q9P2X7 70 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 DMGDHQ9UI17 866 aaKnown RBP11.68□□□□□ -0.54
PKP2-201ENST00000070846 SIK3Q9Y2K2 1263 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 MDM4O15151 490 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 CLASP2O75122 1294 aaKnown RBP11.68□□□□□ -0.54
PKP2-201ENST00000070846 RBL1P28749 1068 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 ERFP50548 548 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 ATP13A4Q4VNC1 1196 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 PSRC1Q6PGN9 363 aaPredicted RBP11.68□□□□□ -0.54
PKP2-201ENST00000070846 CES3Q6UWW8 571 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 C11orf84Q9BUA3 381 aaPredicted RBP11.68□□□□□ -0.54
PKP2-201ENST00000070846 SNRNP25Q9BV90 132 aaKnown RBP11.68□□□□□ -0.54
PKP2-201ENST00000070846 DUSP16Q9BY84 665 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 CFAP97Q9P2B7 532 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 PLIN4Q96Q06 1357 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 H2AFYO75367 372 aaKnown RBP11.68□□□□□ -0.54
PKP2-201ENST00000070846 C22orf31O95567 290 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 GRK3P35626 688 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 LILRA4P59901 499 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 SNRPD1P62314 119 aaKnown RBP11.68□□□□□ -0.54
PKP2-201ENST00000070846 RPL7AP62424 266 aaKnown RBP11.68□□□□□ -0.54
PKP2-201ENST00000070846 GLT6D1Q7Z4J2 308 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 TNS4Q8IZW8 715 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.68□□□□□ -0.54
PKP2-201ENST00000070846 C1QTNF7Q9BXJ2 289 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 MAF1Q9H063 256 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.68□□□□□ -0.54
PKP2-201ENST00000070846 GTF2IRD1Q9UHL9 959 aa11.68□□□□□ -0.54
PKP2-201ENST00000070846 FAM237AA0A1B0GTK4 181 aa11.67□□□□□ -0.54
PKP2-201ENST00000070846 H0Y3Z8 333 aa11.67□□□□□ -0.54
PKP2-201ENST00000070846 GOLGA8TH3BQL2 631 aa11.67□□□□□ -0.54
PKP2-201ENST00000070846 NDUFS2O75306 463 aa11.67□□□□□ -0.54
PKP2-201ENST00000070846 WASP42768 502 aa11.67□□□□□ -0.54
PKP2-201ENST00000070846 VEGFBP49765 207 aa11.67□□□□□ -0.54
PKP2-201ENST00000070846 GTF2A1P52655 376 aaPredicted RBP11.67□□□□□ -0.54
PKP2-201ENST00000070846 TTC39BQ5VTQ0 682 aaPredicted RBP11.67□□□□□ -0.54
PKP2-201ENST00000070846 KRT80Q6KB66 452 aa11.67□□□□□ -0.54
PKP2-201ENST00000070846 MFSD14AQ96MC6 490 aa11.67□□□□□ -0.54
PKP2-201ENST00000070846 CCDC3Q9BQI4 270 aa11.67□□□□□ -0.54
PKP2-201ENST00000070846 WDR41Q9HAD4 459 aa11.67□□□□□ -0.54
PKP2-201ENST00000070846 SLC45A1Q9Y2W3 748 aa11.67□□□□□ -0.54
PKP2-201ENST00000070846 ACOT9Q9Y305 439 aa11.67□□□□□ -0.54
PKP2-201ENST00000070846 RNF103-CHMP3A0A140T963 221 aa11.67□□□□□ -0.54
PKP2-201ENST00000070846 TMEM120BA0PK00 339 aa11.67□□□□□ -0.54
PKP2-201ENST00000070846 C5orf58C9J3I9 102 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms