RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 ATP2A2P16615 1042 aaKnown RBP14.77□□□□□ -0.05
RTFDC1-201ENST00000023939 MAGEA3P43357 314 aa14.77□□□□□ -0.05
RTFDC1-201ENST00000023939 MNX1P50219 401 aaPredicted RBP14.77□□□□□ -0.05
RTFDC1-201ENST00000023939 FAAP100Q0VG06 881 aa14.77□□□□□ -0.05
RTFDC1-201ENST00000023939 PPP2R5DQ14738 602 aa14.77□□□□□ -0.05
RTFDC1-201ENST00000023939 SKIDA1Q1XH10 827 aa14.77□□□□□ -0.05
RTFDC1-201ENST00000023939 BBS9Q3SYG4 887 aa14.77□□□□□ -0.05
RTFDC1-201ENST00000023939 BTBD8Q5XKL5 378 aa14.77□□□□□ -0.05
RTFDC1-201ENST00000023939 MSANTD2Q6P1R3 559 aa14.77□□□□□ -0.05
RTFDC1-201ENST00000023939 FUT10Q6P4F1 479 aa14.77□□□□□ -0.05
RTFDC1-201ENST00000023939 MON1AQ86VX9 555 aa14.77□□□□□ -0.05
RTFDC1-201ENST00000023939 NUP93Q8N1F7 819 aa14.77□□□□□ -0.05
RTFDC1-201ENST00000023939 FBXO36Q8NEA4 188 aa14.77□□□□□ -0.05
RTFDC1-201ENST00000023939 DHRS4Q9BTZ2 278 aa14.77□□□□□ -0.05
RTFDC1-201ENST00000023939 CCDC134Q9H6E4 229 aa14.77□□□□□ -0.05
RTFDC1-201ENST00000023939 EIF2B3Q9NR50 452 aaKnown RBP14.77□□□□□ -0.05
RTFDC1-201ENST00000023939 COMMD8Q9NX08 183 aa14.77□□□□□ -0.05
RTFDC1-201ENST00000023939 RABGEF1Q9UJ41 708 aa14.77□□□□□ -0.05
RTFDC1-201ENST00000023939 H7C4K7 107 aa14.76□□□□□ -0.05
RTFDC1-201ENST00000023939 MTSS1O43312 755 aa14.76□□□□□ -0.05
RTFDC1-201ENST00000023939 GSTA2P09210 222 aa14.76□□□□□ -0.05
RTFDC1-201ENST00000023939 HOXC13P31276 330 aa14.76□□□□□ -0.05
RTFDC1-201ENST00000023939 GATMP50440 423 aa14.76□□□□□ -0.05
RTFDC1-201ENST00000023939 GPR17Q13304 367 aa14.76□□□□□ -0.05
RTFDC1-201ENST00000023939 KLHL38Q2WGJ6 581 aa14.76□□□□□ -0.05
RTFDC1-201ENST00000023939 ANKRD20A2Q5SQ80 823 aa14.76□□□□□ -0.05
RTFDC1-201ENST00000023939 ANKRD20A1Q5TYW2 823 aa14.76□□□□□ -0.05
RTFDC1-201ENST00000023939 ANKRD20A3Q5VUR7 823 aa14.76□□□□□ -0.05
RTFDC1-201ENST00000023939 ARHGEF18Q6ZSZ5 1173 aa14.76□□□□□ -0.05
RTFDC1-201ENST00000023939 CAND1Q86VP6 1230 aaKnown RBP14.76□□□□□ -0.05
RTFDC1-201ENST00000023939 ANKMY2Q8IV38 441 aa14.76□□□□□ -0.05
RTFDC1-201ENST00000023939 SCN4BQ8IWT1 228 aa14.76□□□□□ -0.05
RTFDC1-201ENST00000023939 LRRC43Q8N309 656 aa14.76□□□□□ -0.05
RTFDC1-201ENST00000023939 TAB3Q8N5C8 712 aaPredicted RBP14.76□□□□□ -0.05
RTFDC1-201ENST00000023939 BCAS4Q8TDM0 211 aa14.76□□□□□ -0.05
RTFDC1-201ENST00000023939 C2orf15Q8WU43 125 aaKnown RBP14.76□□□□□ -0.05
RTFDC1-201ENST00000023939 P2RY11Q96G91 374 aa14.76□□□□□ -0.05
RTFDC1-201ENST00000023939 XPO6Q96QU8 1125 aaKnown RBP14.76□□□□□ -0.05
RTFDC1-201ENST00000023939 LGMNQ99538 433 aa14.76□□□□□ -0.05
RTFDC1-201ENST00000023939 PRDM12Q9H4Q4 367 aa14.76□□□□□ -0.05
RTFDC1-201ENST00000023939 XAB2Q9HCS7 855 aaKnown RBP14.76□□□□□ -0.05
RTFDC1-201ENST00000023939 CTNNAL1Q9UBT7 734 aa14.76□□□□□ -0.05
RTFDC1-201ENST00000023939 OR12D3Q9UGF7 316 aa14.76□□□□□ -0.05
RTFDC1-201ENST00000023939 BANF1O75531 89 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 EFEMP2O95967 443 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 APRTP07741 180 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 MLNP12872 115 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 CHN1P15882 459 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 MX2P20592 715 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 SERPINB6P35237 376 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 ELK3P41970 407 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 GEMIN4P57678 1058 aaKnown RBP14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 NRG1Q02297 640 aaPredicted RBP14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 ZNF33AQ06730 810 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 PPIDQ08752 370 aaKnown RBP14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 GALNT2Q10471 571 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 HP1BP3Q5SSJ5 553 aaPredicted RBP14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 C3orf62Q6ZUJ4 267 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 PALM2Q8IXS6 379 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 CYP4X1Q8N118 509 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 SPPL2BQ8TCT7 592 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 ATXN2LQ8WWM7 1075 aaKnown RBP14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 BEGAINQ9BUH8 593 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 SENP1Q9P0U3 644 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 VWA8A3KMH1 1905 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 PLXNA3P51805 1871 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 GMNCA6NCL1 334 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 TBKBP1A7MCY6 615 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 RNF103O00237 685 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 LRIG2O94898 1065 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 FAM107AO95990 144 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 SSTR1P30872 391 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 CCR1P32246 355 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 SLC18A1P54219 525 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 WASHC5Q12768 1159 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 PARP6Q2NL67 630 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 MANEALQ5VSG8 457 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 ANKS3Q6ZW76 656 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 TRABD2AQ86V40 505 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 IGDCC3Q8IVU1 814 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 MDM1Q8TC05 714 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 HDAC11Q96DB2 347 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 SCLYQ96I15 445 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 SPATA17Q96L03 361 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 CEP295NLQ96MC4 621 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 SERPINB11Q96P15 392 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 SELENOSQ9BQE4 189 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 NMUR1Q9HB89 426 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 IGSF9Q9P2J2 1179 aa14.75□□□□□ -0.05
RTFDC1-201ENST00000023939 A0A1W2PQH9 124 aa14.74□□□□□ -0.05
RTFDC1-201ENST00000023939 KCNU1A8MYU2 1149 aa14.74□□□□□ -0.05
RTFDC1-201ENST00000023939 RTN3O95197 1032 aaPredicted RBP14.74□□□□□ -0.05
RTFDC1-201ENST00000023939 SARNPP82979 210 aaKnown RBP14.74□□□□□ -0.05
RTFDC1-201ENST00000023939 TLE2Q04725 743 aa14.74□□□□□ -0.05
RTFDC1-201ENST00000023939 ZNF534Q76KX8 674 aa14.74□□□□□ -0.05
RTFDC1-201ENST00000023939 NLRP14Q86W24 1093 aa14.74□□□□□ -0.05
RTFDC1-201ENST00000023939 CEP57Q86XR8 500 aa14.74□□□□□ -0.05
RTFDC1-201ENST00000023939 LRRN4Q8WUT4 740 aa14.74□□□□□ -0.05
RTFDC1-201ENST00000023939 CASP10Q92851 521 aa14.74□□□□□ -0.05
RTFDC1-201ENST00000023939 RNF34Q969K3 372 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms