RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 GsnP13020 780 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Scd1P13516 355 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Slc24a2Q14BI1 711 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Alkbh5Q3TSG4 395 aaKnown RBP12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Clec1aQ8BWY2 269 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Dclre1bQ8C7W7 541 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 PygbQ8CI94 843 aaKnown RBP12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Fbxo21Q8VDH1 627 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Tas1r3Q925D8 858 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Ttc30a1Q99J38 664 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Ttc30bQ9CY00 664 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 PodxlQ9R0M4 503 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Arid3bQ9Z1N7 568 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Htr2cP34968 459 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Sat1P48026 171 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Smpdl3bP58242 456 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Nploc4P60670 608 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Serping1P97290 504 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 HdxQ14B70 692 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Aarsd1Q3THG9 412 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Fam131bQ3TY60 332 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 E330034G19RikQ3UWX6 351 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Nlgn2Q69ZK9 836 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Ccdc17Q8CE13 565 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Vmn1r64Q8R2B8 320 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Map4k3Q99JP0 894 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Rec114Q9CWH4 259 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 JundP15066 341 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Lhx5P61375 402 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Dsg1bQ7TSF1 1060 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Rassf6Q80UQ2 353 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Tmtc3Q8BRH0 920 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Scara3Q8C850 606 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Pcdhb21Q91V48 774 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Trps1Q925H1 1281 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Grk2Q99MK8 689 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Lrrc57Q9D1G5 239 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Abca3Q8R420 1704 aa12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Znfx1Q8R151 1909 aaKnown RBP12.18□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Vmn2r72D3Z4N8 856 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Zfp780bE9Q2S6 806 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Cyp2j6O54750 501 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Mmp13P33435 472 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Ccr5P51682 354 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Map3k7clP58500 142 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Scrn3Q3TMH2 418 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Zfp607aQ3TQG9 686 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Cd37Q61470 281 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Olfr213Q7TS32 327 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Nipsnap3bQ9CQE1 247 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 ToporslQ9D2F8 683 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Gm10801F7C7Q0 168 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Gm10250G3X9L6 160 aaKnown RBP12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 C2P21180 760 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 CremP27699 357 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Gdf6P43028 454 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 AdssP46664 456 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Timm13P62075 95 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Rcn1Q05186 325 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Oas1fQ14AZ4 364 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Pik3r5Q5SW28 871 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Znf821Q6PD05 413 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Skida1Q80YR3 822 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Snx16Q8C080 344 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Kdm1bQ8CIG3 826 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Dync1li1Q8R1Q8 523 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Mob2Q8VI63 235 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Rxfp2Q91ZZ5 737 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 TheglQ9DA15 459 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Atp5hQ9DCX2 161 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Ripk3Q9QZL0 486 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 PygmQ9WUB3 842 aaKnown RBP12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Pex10B1AUE5 324 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Zscan5bB2RTN3 468 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 XntrpcF8VQM8 1264 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Gm3138K7N754 218 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Pdk4O70571 412 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Ephb3P54754 993 aaKnown RBP12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 4930430A15RikQ05AC5 485 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Zfp560Q3URI6 754 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Q6PAC4 1279 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Olfr867Q7TRF3 331 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Znf569Q80W31 679 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 ClmnQ8C5W0 1052 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Fbxo43Q8CDI2 640 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Edf1Q9JMG1 148 aaKnown RBP12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Msh5Q9QUM7 833 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Trpc2Q9R244 1172 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Armt1A6H630 439 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Erich1E9PY43 332 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Chrna9G3X8Z7 479 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Cyb5r4Q3TDX8 528 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 MelkQ61846 643 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 GzmnQ920S1 248 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Prl2a1Q9JHK0 228 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Plod1Q9R0E2 728 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Epm2aQ9WUA5 330 aa12.17□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Fam209A2APA5 170 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Gm8879F6R3J9 157 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Klf6O08584 283 aa12.16□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms