RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 TRIQKQ629K1 86 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 BNIPLQ7Z465 357 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 ULK2Q8IYT8 1036 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 C4orf33Q8N1A6 199 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 ANKRD53Q8N9V6 530 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 CCDC126Q96EE4 140 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 HEXIM2Q96MH2 286 aaKnown RBP8.48□□□□□ -1.05
NECAP1-227ENST00000640648 MRPL9Q9BYD2 267 aaKnown RBP8.48□□□□□ -1.05
NECAP1-227ENST00000640648 CDC42EP4Q9H3Q1 356 aaKnown RBP8.48□□□□□ -1.05
NECAP1-227ENST00000640648 DENND2DQ9H6A0 471 aaPredicted RBP8.48□□□□□ -1.05
NECAP1-227ENST00000640648 CACYBPQ9HB71 228 aaKnown RBP8.48□□□□□ -1.05
NECAP1-227ENST00000640648 RAVER2Q9HCJ3 691 aaKnown RBP8.48□□□□□ -1.05
NECAP1-227ENST00000640648 ZNF277Q9NRM2 450 aaPredicted RBP8.48□□□□□ -1.05
NECAP1-227ENST00000640648 DNAJC11Q9NVH1 559 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 APEX2Q9UBZ4 518 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 IP6K2Q9UHH9 426 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 AKT3Q9Y243 479 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 ADAMTS13Q76LX8 1427 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 SH3D21A4FU49 640 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 SLC22A1O15245 554 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 DFNA5O60443 496 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 CRTAPO75718 401 aaPredicted RBP8.48□□□□□ -1.05
NECAP1-227ENST00000640648 SEC24DO94855 1032 aaPredicted RBP8.48□□□□□ -1.05
NECAP1-227ENST00000640648 PIK3R1P27986 724 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 TPTEP56180 551 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 PRKCQQ04759 706 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 FAPQ12884 760 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 COX10Q12887 443 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 PKN2Q16513 984 aaKnown RBP8.48□□□□□ -1.05
NECAP1-227ENST00000640648 FAM160B1Q5W0V3 765 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 KCNK18Q7Z418 384 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 TTC29Q8NA56 475 aaPredicted RBP8.48□□□□□ -1.05
NECAP1-227ENST00000640648 FAM172AQ8WUF8 416 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 VPS39Q96JC1 886 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 GCNAQ96QF7 691 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 C1orf21Q9H246 121 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 ACAD9Q9H845 621 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 GDAP2Q9NXN4 497 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 PCYOX1Q9UHG3 505 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 TNS3Q68CZ2 1445 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 SALL1Q9NSC2 1324 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 PCP4L1A6NKN8 68 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 C2orf74A8MZ97 194 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 RPS17P08708 135 aaKnown RBP8.48□□□□□ -1.05
NECAP1-227ENST00000640648 ETS2P15036 469 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 RCVRNP35243 200 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 RPL22P35268 128 aaKnown RBP8.48□□□□□ -1.05
NECAP1-227ENST00000640648 SLC26A3P40879 764 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 BFSP2Q13515 415 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 AUHQ13825 339 aaKnown RBP8.48□□□□□ -1.05
NECAP1-227ENST00000640648 C6orf183Q5T699 404 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 DCP2Q8IU60 420 aaKnown RBP8.48□□□□□ -1.05
NECAP1-227ENST00000640648 CENPSQ8N2Z9 138 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 TMEM35BQ8NCS4 154 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 EPS8L3Q8TE67 593 aaKnown RBP8.48□□□□□ -1.05
NECAP1-227ENST00000640648 TLR10Q9BXR5 811 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 SLC13A1Q9BZW2 595 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 SEMA6BQ9H3T3 888 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 BRD9Q9H8M2 597 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 STOX2Q9P2F5 926 aaPredicted RBP8.48□□□□□ -1.05
NECAP1-227ENST00000640648 MLXQ9UH92 298 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 TMCC3Q9ULS5 477 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 POLIQ9UNA4 740 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 PLCL2Q9UPR0 1127 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 SHOC2Q9UQ13 582 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 INPP5FQ9Y2H2 1132 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 ALG6Q9Y672 507 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 KCNE2Q9Y6J6 123 aa8.48□□□□□ -1.05
NECAP1-227ENST00000640648 PRKD3O94806 890 aa8.47□□□□□ -1.05
NECAP1-227ENST00000640648 MYO1DO94832 1006 aa8.47□□□□□ -1.05
NECAP1-227ENST00000640648 DDX5P17844 614 aaKnown RBP8.47□□□□□ -1.05
NECAP1-227ENST00000640648 BMP6P22004 513 aa8.47□□□□□ -1.05
NECAP1-227ENST00000640648 GNA15P30679 374 aa8.47□□□□□ -1.05
NECAP1-227ENST00000640648 QARSP47897 775 aaKnown RBP8.47□□□□□ -1.05
NECAP1-227ENST00000640648 PPM1FP49593 454 aaPredicted RBP8.47□□□□□ -1.05
NECAP1-227ENST00000640648 VBP1P61758 197 aa8.47□□□□□ -1.05
NECAP1-227ENST00000640648 PKN1Q16512 942 aa8.47□□□□□ -1.05
NECAP1-227ENST00000640648 DGKDQ16760 1214 aa8.47□□□□□ -1.05
NECAP1-227ENST00000640648 DCAF15Q66K64 600 aa8.47□□□□□ -1.05
NECAP1-227ENST00000640648 DUS1LQ6P1R4 473 aaKnown RBP8.47□□□□□ -1.05
NECAP1-227ENST00000640648 RNF19BQ6ZMZ0 732 aa8.47□□□□□ -1.05
NECAP1-227ENST00000640648 PLEKHM3Q6ZWE6 761 aa8.47□□□□□ -1.05
NECAP1-227ENST00000640648 ADGRA1Q86SQ6 560 aa8.47□□□□□ -1.05
NECAP1-227ENST00000640648 OR8H2Q8N162 312 aa8.47□□□□□ -1.05
NECAP1-227ENST00000640648 SERHL2Q9H4I8 314 aa8.47□□□□□ -1.05
NECAP1-227ENST00000640648 TCF7L2Q9NQB0 619 aa8.47□□□□□ -1.05
NECAP1-227ENST00000640648 ZMYM2Q9UBW7 1377 aa8.47□□□□□ -1.05
NECAP1-227ENST00000640648 TCEA3O75764 348 aa8.47□□□□□ -1.05
NECAP1-227ENST00000640648 FKBP9O95302 570 aa8.47□□□□□ -1.05
NECAP1-227ENST00000640648 PSAPP07602 524 aa8.47□□□□□ -1.05
NECAP1-227ENST00000640648 ZNF23P17027 643 aa8.47□□□□□ -1.05
NECAP1-227ENST00000640648 ENDOUP21128 410 aaKnown RBP8.47□□□□□ -1.05
NECAP1-227ENST00000640648 ARSEP51690 589 aa8.47□□□□□ -1.05
NECAP1-227ENST00000640648 PSMC6P62333 389 aa8.47□□□□□ -1.05
NECAP1-227ENST00000640648 TRIM32Q13049 653 aa8.47□□□□□ -1.05
NECAP1-227ENST00000640648 GRB10Q13322 594 aa8.47□□□□□ -1.05
NECAP1-227ENST00000640648 SEC23AQ15436 765 aa8.47□□□□□ -1.05
NECAP1-227ENST00000640648 C2CD6Q53TS8 623 aa8.47□□□□□ -1.05
NECAP1-227ENST00000640648 PPM1LQ5SGD2 360 aa8.47□□□□□ -1.05
NECAP1-227ENST00000640648 ATG14Q6ZNE5 492 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms