RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 FAM131BQ86XD5 332 aa13.71□□□□□ -0.21
GTF3A-209ENST00000640289 TMEM25Q86YD3 366 aa13.71□□□□□ -0.21
GTF3A-209ENST00000640289 CPA6Q8N4T0 437 aa13.71□□□□□ -0.21
GTF3A-209ENST00000640289 ACRBPQ8NEB7 543 aa13.71□□□□□ -0.21
GTF3A-209ENST00000640289 CTNNBL1Q8WYA6 563 aaPredicted RBP13.71□□□□□ -0.21
GTF3A-209ENST00000640289 CENPIQ92674 756 aaPredicted RBP13.71□□□□□ -0.21
GTF3A-209ENST00000640289 CHFRQ96EP1 664 aa13.71□□□□□ -0.21
GTF3A-209ENST00000640289 BTBD6Q96KE9 485 aa13.71□□□□□ -0.21
GTF3A-209ENST00000640289 EIF3CQ99613 913 aaKnown RBP13.71□□□□□ -0.21
GTF3A-209ENST00000640289 MRPL47Q9HD33 250 aaKnown RBP13.71□□□□□ -0.21
GTF3A-209ENST00000640289 SPHK2Q9NRA0 654 aa13.71□□□□□ -0.21
GTF3A-209ENST00000640289 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.71□□□□□ -0.21
GTF3A-209ENST00000640289 CTTNBP2NLQ9P2B4 639 aa13.71□□□□□ -0.21
GTF3A-209ENST00000640289 WNT16Q9UBV4 365 aa13.71□□□□□ -0.21
GTF3A-209ENST00000640289 PIAS3Q9Y6X2 628 aa13.71□□□□□ -0.21
GTF3A-209ENST00000640289 VCANP13611 3396 aa13.7□□□□□ -0.22
GTF3A-209ENST00000640289 KIF26AQ9ULI4 1882 aaPredicted RBP13.7□□□□□ -0.22
GTF3A-209ENST00000640289 SHISA7A6NL88 538 aa13.7□□□□□ -0.22
GTF3A-209ENST00000640289 PI4K2BG5E9Z4 385 aa13.7□□□□□ -0.22
GTF3A-209ENST00000640289 F9P00740 461 aa13.7□□□□□ -0.22
GTF3A-209ENST00000640289 ALADP13716 330 aa13.7□□□□□ -0.22
GTF3A-209ENST00000640289 PSMA2P25787 234 aa13.7□□□□□ -0.22
GTF3A-209ENST00000640289 GJA4P35212 333 aa13.7□□□□□ -0.22
GTF3A-209ENST00000640289 GGCXP38435 758 aa13.7□□□□□ -0.22
GTF3A-209ENST00000640289 HDAC4P56524 1084 aa13.7□□□□□ -0.22
GTF3A-209ENST00000640289 SIGLEC14Q08ET2 396 aa13.7□□□□□ -0.22
GTF3A-209ENST00000640289 PPP2R5DQ14738 602 aa13.7□□□□□ -0.22
GTF3A-209ENST00000640289 SPA17Q15506 151 aa13.7□□□□□ -0.22
GTF3A-209ENST00000640289 MLF2Q15773 248 aaPredicted RBP13.7□□□□□ -0.22
GTF3A-209ENST00000640289 GAB4Q2WGN9 574 aa13.7□□□□□ -0.22
GTF3A-209ENST00000640289 ANO4Q32M45 955 aa13.7□□□□□ -0.22
GTF3A-209ENST00000640289 FAM133BQ5BKY9 247 aaKnown RBP13.7□□□□□ -0.22
GTF3A-209ENST00000640289 NAIF1Q69YI7 327 aaPredicted RBP13.7□□□□□ -0.22
GTF3A-209ENST00000640289 RFWD3Q6PCD5 774 aa13.7□□□□□ -0.22
GTF3A-209ENST00000640289 SND1Q7KZF4 910 aaKnown RBP eCLIP13.7□□□□□ -0.22
GTF3A-209ENST00000640289 STRADAQ7RTN6 431 aa13.7□□□□□ -0.22
GTF3A-209ENST00000640289 LRRC8AQ8IWT6 810 aa13.7□□□□□ -0.22
GTF3A-209ENST00000640289 FAM217AQ8IXS0 508 aa13.7□□□□□ -0.22
GTF3A-209ENST00000640289 SIX5Q8N196 739 aa13.7□□□□□ -0.22
GTF3A-209ENST00000640289 ARFGAP1Q8N6T3 406 aa13.7□□□□□ -0.22
GTF3A-209ENST00000640289 ATP6V0D2Q8N8Y2 350 aa13.7□□□□□ -0.22
GTF3A-209ENST00000640289 ZNF564Q8TBZ8 553 aaPredicted RBP13.7□□□□□ -0.22
GTF3A-209ENST00000640289 BHMTQ93088 406 aa13.7□□□□□ -0.22
GTF3A-209ENST00000640289 MYEOVQ96EZ4 313 aa13.7□□□□□ -0.22
GTF3A-209ENST00000640289 CNPY3Q9BT09 278 aa13.7□□□□□ -0.22
GTF3A-209ENST00000640289 TKTL2Q9H0I9 626 aa13.7□□□□□ -0.22
GTF3A-209ENST00000640289 EPHX3Q9H6B9 360 aa13.7□□□□□ -0.22
GTF3A-209ENST00000640289 WDCPQ9H6R7 721 aa13.7□□□□□ -0.22
GTF3A-209ENST00000640289 OSGEPQ9NPF4 335 aa13.7□□□□□ -0.22
GTF3A-209ENST00000640289 ARHGEF3Q9NR81 526 aa13.7□□□□□ -0.22
GTF3A-209ENST00000640289 ARHGEF38Q9NXL2 777 aa13.7□□□□□ -0.22
GTF3A-209ENST00000640289 PLK2Q9NYY3 685 aa13.7□□□□□ -0.22
GTF3A-209ENST00000640289 ANAPC7Q9UJX3 599 aa13.7□□□□□ -0.22
GTF3A-209ENST00000640289 STOML2Q9UJZ1 356 aa13.7□□□□□ -0.22
GTF3A-209ENST00000640289 REXO2Q9Y3B8 237 aaKnown RBP13.7□□□□□ -0.22
GTF3A-209ENST00000640289 PCDHA13Q9Y5I0 950 aa13.7□□□□□ -0.22
GTF3A-209ENST00000640289 SPECC1L-ADORA2AF8WAN1 911 aa13.69□□□□□ -0.22
GTF3A-209ENST00000640289 PAGE1O75459 146 aa13.69□□□□□ -0.22
GTF3A-209ENST00000640289 LATS1O95835 1130 aa13.69□□□□□ -0.22
GTF3A-209ENST00000640289 PDGFBP01127 241 aaPredicted RBP13.69□□□□□ -0.22
GTF3A-209ENST00000640289 SLC2A3P11169 496 aa13.69□□□□□ -0.22
GTF3A-209ENST00000640289 ADH5P11766 374 aa13.69□□□□□ -0.22
GTF3A-209ENST00000640289 CD72P21854 359 aa13.69□□□□□ -0.22
GTF3A-209ENST00000640289 CHKAP35790 457 aa13.69□□□□□ -0.22
GTF3A-209ENST00000640289 SLC11A2P49281 568 aa13.69□□□□□ -0.22
GTF3A-209ENST00000640289 SGSHP51688 502 aa13.69□□□□□ -0.22
GTF3A-209ENST00000640289 MS4A13Q5J8X5 152 aa13.69□□□□□ -0.22
GTF3A-209ENST00000640289 BRMS1LQ5PSV4 323 aa13.69□□□□□ -0.22
GTF3A-209ENST00000640289 C10orf76Q5T2E6 689 aa13.69□□□□□ -0.22
GTF3A-209ENST00000640289 ADGRF1Q5T601 910 aa13.69□□□□□ -0.22
GTF3A-209ENST00000640289 PIK3R6Q5UE93 754 aa13.69□□□□□ -0.22
GTF3A-209ENST00000640289 DAB2IPQ5VWQ8 1189 aa13.69□□□□□ -0.22
GTF3A-209ENST00000640289 RAP1GAP2Q684P5 730 aa13.69□□□□□ -0.22
GTF3A-209ENST00000640289 TXNDC11Q6PKC3 985 aa13.69□□□□□ -0.22
GTF3A-209ENST00000640289 TRIM67Q6ZTA4 783 aa13.69□□□□□ -0.22
GTF3A-209ENST00000640289 TPRG1Q6ZUI0 275 aa13.69□□□□□ -0.22
GTF3A-209ENST00000640289 C12orf40Q86WS4 652 aa13.69□□□□□ -0.22
GTF3A-209ENST00000640289 CPXM2Q8N436 756 aa13.69□□□□□ -0.22
GTF3A-209ENST00000640289 CCDC185Q8N715 623 aa13.69□□□□□ -0.22
GTF3A-209ENST00000640289 ANP32BQ92688 251 aaKnown RBP13.69□□□□□ -0.22
GTF3A-209ENST00000640289 AZIN2Q96A70 460 aa13.69□□□□□ -0.22
GTF3A-209ENST00000640289 PDLIM2Q96JY6 352 aa13.69□□□□□ -0.22
GTF3A-209ENST00000640289 BTN2A3PQ96KV6 586 aa13.69□□□□□ -0.22
GTF3A-209ENST00000640289 DESI2Q9BSY9 194 aa13.69□□□□□ -0.22
GTF3A-209ENST00000640289 MAGEB5Q9BZ81 275 aa13.69□□□□□ -0.22
GTF3A-209ENST00000640289 SNX10Q9Y5X0 201 aa13.69□□□□□ -0.22
GTF3A-209ENST00000640289 HS3ST4Q9Y661 456 aa13.69□□□□□ -0.22
GTF3A-209ENST00000640289 COL4A2P08572 1712 aa13.69□□□□□ -0.22
GTF3A-209ENST00000640289 RCCD1A6NED2 376 aa13.68□□□□□ -0.22
GTF3A-209ENST00000640289 NEDD8-MDP1E9PL57 170 aa13.68□□□□□ -0.22
GTF3A-209ENST00000640289 GFRA2O00451 464 aa13.68□□□□□ -0.22
GTF3A-209ENST00000640289 ADH1CP00326 375 aa13.68□□□□□ -0.22
GTF3A-209ENST00000640289 TACR2P21452 398 aa13.68□□□□□ -0.22
GTF3A-209ENST00000640289 CTHP32929 405 aa13.68□□□□□ -0.22
GTF3A-209ENST00000640289 SLC6A11P48066 632 aa13.68□□□□□ -0.22
GTF3A-209ENST00000640289 GAD2Q05329 585 aa13.68□□□□□ -0.22
GTF3A-209ENST00000640289 NR1H3Q13133 447 aa13.68□□□□□ -0.22
GTF3A-209ENST00000640289 FYB2Q5VWT5 728 aa13.68□□□□□ -0.22
GTF3A-209ENST00000640289 SCYL2Q6P3W7 929 aa13.68□□□□□ -0.22
GTF3A-209ENST00000640289 CHSY1Q86X52 802 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms