RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 AK5Q9Y6K8 562 aa21.12■□□□□ 0.97
PMS1-222ENST00000639501 SIP14410 1827 aa21.11■□□□□ 0.97
PMS1-222ENST00000639501 COL2A1P02458 1487 aaPredicted RBP21.11■□□□□ 0.97
PMS1-222ENST00000639501 K7ERI5 159 aa21.11■□□□□ 0.97
PMS1-222ENST00000639501 METTL18O95568 372 aa21.11■□□□□ 0.97
PMS1-222ENST00000639501 MAGEA3P43357 314 aa21.11■□□□□ 0.97
PMS1-222ENST00000639501 CBLBQ13191 982 aa21.11■□□□□ 0.97
PMS1-222ENST00000639501 APOFQ13790 326 aa21.11■□□□□ 0.97
PMS1-222ENST00000639501 PPP6R3Q5H9R7 873 aaPredicted RBP21.11■□□□□ 0.97
PMS1-222ENST00000639501 WDR78Q5VTH9 848 aa21.11■□□□□ 0.97
PMS1-222ENST00000639501 LILRA2Q8N149 483 aa21.11■□□□□ 0.97
PMS1-222ENST00000639501 PLD5Q8N7P1 536 aa21.11■□□□□ 0.97
PMS1-222ENST00000639501 SSX2IPQ9Y2D8 614 aa21.11■□□□□ 0.97
PMS1-222ENST00000639501 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.11■□□□□ 0.97
PMS1-222ENST00000639501 ATP6V1G1O75348 118 aa21.11■□□□□ 0.97
PMS1-222ENST00000639501 ENDOD1O94919 500 aa21.11■□□□□ 0.97
PMS1-222ENST00000639501 PIGRP01833 764 aa21.11■□□□□ 0.97
PMS1-222ENST00000639501 SERPINE1P05121 402 aa21.11■□□□□ 0.97
PMS1-222ENST00000639501 TPP2P29144 1249 aaPredicted RBP21.11■□□□□ 0.97
PMS1-222ENST00000639501 C15orf59Q2T9L4 293 aaPredicted RBP21.11■□□□□ 0.97
PMS1-222ENST00000639501 ACBD5Q5T8D3 534 aaPredicted RBP21.11■□□□□ 0.97
PMS1-222ENST00000639501 ARHGEF16Q5VV41 709 aa21.11■□□□□ 0.97
PMS1-222ENST00000639501 CATSPER2Q96P56 530 aa21.11■□□□□ 0.97
PMS1-222ENST00000639501 EBNA1BP2Q99848 306 aaKnown RBP21.11■□□□□ 0.97
PMS1-222ENST00000639501 DHX33Q9H6R0 707 aaKnown RBP21.11■□□□□ 0.97
PMS1-222ENST00000639501 ZNF696Q9H7X3 374 aa21.11■□□□□ 0.97
PMS1-222ENST00000639501 RIMS3Q9UJD0 308 aa21.11■□□□□ 0.97
PMS1-222ENST00000639501 H3BSA7 217 aa21.1■□□□□ 0.97
PMS1-222ENST00000639501 PIK3R2O00459 728 aa21.1■□□□□ 0.97
PMS1-222ENST00000639501 HMGCRP04035 888 aa21.1■□□□□ 0.97
PMS1-222ENST00000639501 FAM163BP0C2L3 166 aa21.1■□□□□ 0.97
PMS1-222ENST00000639501 DESP17661 470 aa21.1■□□□□ 0.97
PMS1-222ENST00000639501 POLR2BP30876 1174 aaKnown RBP21.1■□□□□ 0.97
PMS1-222ENST00000639501 ADARP55265 1226 aaKnown RBP21.1■□□□□ 0.97
PMS1-222ENST00000639501 FKBP1AP62942 108 aaKnown RBP21.1■□□□□ 0.97
PMS1-222ENST00000639501 TIFABQ6ZNK6 161 aa21.1■□□□□ 0.97
PMS1-222ENST00000639501 AMIGO2Q86SJ2 522 aa21.1■□□□□ 0.97
PMS1-222ENST00000639501 ZBTB33Q86T24 672 aa21.1■□□□□ 0.97
PMS1-222ENST00000639501 SNRNP27Q8WVK2 155 aaKnown RBP21.1■□□□□ 0.97
PMS1-222ENST00000639501 PIWIL1Q96J94 861 aaKnown RBP21.1■□□□□ 0.97
PMS1-222ENST00000639501 ZFRQ96KR1 1074 aaKnown RBP21.1■□□□□ 0.97
PMS1-222ENST00000639501 KLC2Q9H0B6 622 aa21.1■□□□□ 0.97
PMS1-222ENST00000639501 TMOD2Q9NZR1 351 aa21.1■□□□□ 0.97
PMS1-222ENST00000639501 C6orf203Q9P0P8 240 aaPredicted RBP21.1■□□□□ 0.97
PMS1-222ENST00000639501 ARHGAP26Q9UNA1 814 aa21.1■□□□□ 0.97
PMS1-222ENST00000639501 F5H423 210 aaPredicted RBP21.1■□□□□ 0.97
PMS1-222ENST00000639501 ZBED1O96006 694 aa21.1■□□□□ 0.97
PMS1-222ENST00000639501 ALOX15P16050 662 aaPredicted RBP21.1■□□□□ 0.97
PMS1-222ENST00000639501 KCNA2P16389 499 aa21.1■□□□□ 0.97
PMS1-222ENST00000639501 ATXN3P54252 364 aaPredicted RBP21.1■□□□□ 0.97
PMS1-222ENST00000639501 YWHAEP62258 255 aaKnown RBP21.1■□□□□ 0.97
PMS1-222ENST00000639501 CRADDP78560 199 aa21.1■□□□□ 0.97
PMS1-222ENST00000639501 TMED1Q13445 227 aa21.1■□□□□ 0.97
PMS1-222ENST00000639501 CDO1Q16878 200 aa21.1■□□□□ 0.97
PMS1-222ENST00000639501 DALRD3Q5D0E6 543 aaKnown RBP21.1■□□□□ 0.97
PMS1-222ENST00000639501 PPM1JQ5JR12 505 aa21.1■□□□□ 0.97
PMS1-222ENST00000639501 PPM1LQ5SGD2 360 aa21.1■□□□□ 0.97
PMS1-222ENST00000639501 TICAM1Q8IUC6 712 aa21.1■□□□□ 0.97
PMS1-222ENST00000639501 AHI1Q8N157 1196 aa21.1■□□□□ 0.97
PMS1-222ENST00000639501 PQLC3Q8N755 202 aa21.1■□□□□ 0.97
PMS1-222ENST00000639501 DEPTORQ8TB45 409 aa21.1■□□□□ 0.97
PMS1-222ENST00000639501 ZNF526Q8TF50 670 aaPredicted RBP21.1■□□□□ 0.97
PMS1-222ENST00000639501 RTP4Q96DX8 246 aa21.1■□□□□ 0.97
PMS1-222ENST00000639501 CLMNQ96JQ2 1002 aa21.1■□□□□ 0.97
PMS1-222ENST00000639501 ZNF358Q9NW07 568 aa21.1■□□□□ 0.97
PMS1-222ENST00000639501 BRCA1P38398 1863 aaKnown RBP21.1■□□□□ 0.97
PMS1-222ENST00000639501 H0YCG3 227 aa21.09■□□□□ 0.97
PMS1-222ENST00000639501 STRNO43815 780 aa21.09■□□□□ 0.97
PMS1-222ENST00000639501 TNFAIP8O95379 198 aa21.09■□□□□ 0.97
PMS1-222ENST00000639501 LDHAP00338 332 aaKnown RBP21.09■□□□□ 0.97
PMS1-222ENST00000639501 CNTN2Q02246 1040 aa21.09■□□□□ 0.97
PMS1-222ENST00000639501 SLC10A2Q12908 348 aaPredicted RBP21.09■□□□□ 0.97
PMS1-222ENST00000639501 KLF10Q13118 480 aa21.09■□□□□ 0.97
PMS1-222ENST00000639501 PRKG1Q13976 671 aa21.09■□□□□ 0.97
PMS1-222ENST00000639501 ADGRE1Q14246 886 aa21.09■□□□□ 0.97
PMS1-222ENST00000639501 SLC9B1Q4ZJI4 515 aa21.09■□□□□ 0.97
PMS1-222ENST00000639501 SLFN12LQ6IEE8 588 aa21.09■□□□□ 0.97
PMS1-222ENST00000639501 BRSK2Q8IWQ3 736 aa21.09■□□□□ 0.97
PMS1-222ENST00000639501 RDM1Q8NG50 284 aa21.09■□□□□ 0.97
PMS1-222ENST00000639501 MAPK15Q8TD08 544 aa21.09■□□□□ 0.97
PMS1-222ENST00000639501 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.09■□□□□ 0.97
PMS1-222ENST00000639501 RNF157Q96PX1 679 aa21.09■□□□□ 0.97
PMS1-222ENST00000639501 ZNF341Q9BYN7 854 aa21.09■□□□□ 0.97
PMS1-222ENST00000639501 COPS7BQ9H9Q2 264 aaPredicted RBP21.09■□□□□ 0.97
PMS1-222ENST00000639501 PSAT1Q9Y617 370 aa21.09■□□□□ 0.97
PMS1-222ENST00000639501 FAM189A1O60320 539 aa21.09■□□□□ 0.97
PMS1-222ENST00000639501 RGS20O76081 388 aa21.09■□□□□ 0.97
PMS1-222ENST00000639501 IL4RP24394 825 aa21.09■□□□□ 0.97
PMS1-222ENST00000639501 THOP1P52888 689 aa21.09■□□□□ 0.97
PMS1-222ENST00000639501 KRT81Q14533 505 aa21.09■□□□□ 0.97
PMS1-222ENST00000639501 PDK1Q15118 436 aa21.09■□□□□ 0.97
PMS1-222ENST00000639501 ZNF410Q86VK4 478 aa21.09■□□□□ 0.97
PMS1-222ENST00000639501 KCNK16Q96T55 309 aa21.09■□□□□ 0.97
PMS1-222ENST00000639501 PIH1D1Q9NWS0 290 aaKnown RBP21.09■□□□□ 0.97
PMS1-222ENST00000639501 NXF1Q9UBU9 619 aaKnown RBP21.09■□□□□ 0.97
PMS1-222ENST00000639501 HMGXB4Q9UGU5 601 aa21.09■□□□□ 0.97
PMS1-222ENST00000639501 RAB26Q9ULW5 256 aa21.09■□□□□ 0.97
PMS1-222ENST00000639501 GNEQ9Y223 722 aaKnown RBP21.09■□□□□ 0.97
PMS1-222ENST00000639501 PCDHA11Q9Y5I1 949 aa21.09■□□□□ 0.97
PMS1-222ENST00000639501 XRCC1P18887 633 aaPredicted RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms