RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 ANO9A1A5B4 782 aa16.72■□□□□ 0.27
CACNA1A-258ENST00000638029 GSAPA4D1B5 854 aa16.72■□□□□ 0.27
CACNA1A-258ENST00000638029 MYMKA6NI61 221 aa16.72■□□□□ 0.27
CACNA1A-258ENST00000638029 DGAT1O75907 488 aa16.72■□□□□ 0.27
CACNA1A-258ENST00000638029 ARHGDIBP52566 201 aa16.72■□□□□ 0.27
CACNA1A-258ENST00000638029 ARMC3Q5W041 872 aa16.72■□□□□ 0.27
CACNA1A-258ENST00000638029 ZSWIM2Q8NEG5 633 aa16.72■□□□□ 0.27
CACNA1A-258ENST00000638029 BAIAP3O94812 1187 aa16.72■□□□□ 0.27
CACNA1A-258ENST00000638029 ZNF37AP17032 561 aaPredicted RBP16.72■□□□□ 0.27
CACNA1A-258ENST00000638029 GARTP22102 1010 aa16.72■□□□□ 0.27
CACNA1A-258ENST00000638029 ALAS2P22557 587 aa16.72■□□□□ 0.27
CACNA1A-258ENST00000638029 S100GP29377 79 aa16.72■□□□□ 0.27
CACNA1A-258ENST00000638029 PSEN2P49810 448 aa16.72■□□□□ 0.27
CACNA1A-258ENST00000638029 TRAP1Q12931 704 aaKnown RBP16.72■□□□□ 0.27
CACNA1A-258ENST00000638029 ENKURQ8TC29 256 aa16.72■□□□□ 0.27
CACNA1A-258ENST00000638029 H7C1W4 665 aa16.72■□□□□ 0.27
CACNA1A-258ENST00000638029 PTGER2P43116 358 aa16.72■□□□□ 0.27
CACNA1A-258ENST00000638029 NEK6Q9HC98 313 aa16.72■□□□□ 0.27
CACNA1A-258ENST00000638029 STK39Q9UEW8 545 aa16.72■□□□□ 0.27
CACNA1A-258ENST00000638029 ATP5F1P24539 256 aaPredicted RBP16.72■□□□□ 0.27
CACNA1A-258ENST00000638029 XKR3Q5GH77 459 aa16.72■□□□□ 0.27
CACNA1A-258ENST00000638029 KDM6AO15550 1401 aaPredicted RBP16.72■□□□□ 0.27
CACNA1A-258ENST00000638029 FAM220BPB1ANY3 271 aa16.72■□□□□ 0.27
CACNA1A-258ENST00000638029 PTGES3LE9PB15 166 aa16.72■□□□□ 0.27
CACNA1A-258ENST00000638029 PHF2O75151 1096 aa16.72■□□□□ 0.27
CACNA1A-258ENST00000638029 STARP49675 285 aa16.72■□□□□ 0.27
CACNA1A-258ENST00000638029 OXCT1P55809 520 aa16.72■□□□□ 0.27
CACNA1A-258ENST00000638029 GRSF1Q12849 480 aaKnown RBP eCLIP16.72■□□□□ 0.27
CACNA1A-258ENST00000638029 PHF21BQ96EK2 531 aa16.72■□□□□ 0.27
CACNA1A-258ENST00000638029 USP15Q9Y4E8 981 aaPredicted RBP16.72■□□□□ 0.27
CACNA1A-258ENST00000638029 KIAA0391O15091 583 aaKnown RBP16.72■□□□□ 0.27
CACNA1A-258ENST00000638029 PDK1Q15118 436 aa16.72■□□□□ 0.27
CACNA1A-258ENST00000638029 ERP27Q96DN0 273 aa16.72■□□□□ 0.27
CACNA1A-258ENST00000638029 MYOZ2Q9NPC6 264 aa16.72■□□□□ 0.27
CACNA1A-258ENST00000638029 CLEC4AQ9UMR7 237 aa16.72■□□□□ 0.27
CACNA1A-258ENST00000638029 A0A1W2PRG6 482 aa16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 SLC2A4P14672 509 aa16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 DNAL1Q4LDG9 190 aa16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 RBM15Q96T37 977 aaKnown RBP eCLIP16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 ARHGAP9Q9BRR9 750 aa16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 MYH7P12883 1935 aa16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 ADCY10Q96PN6 1610 aa16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 MYL12AP19105 171 aa16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 MDH1P40925 334 aaKnown RBP16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 CLK3P49761 638 aaKnown RBP16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 GMPSP49915 693 aaPredicted RBP16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 CACNA2D1P54289 1103 aa16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 ATP2C1P98194 919 aaPredicted RBP16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 GRB14Q14449 540 aa16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 GPAT2Q6NUI2 795 aa16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 CASP12Q6UXS9 341 aa16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 PSMC3IPQ9P2W1 217 aaPredicted RBP16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 GTF2A2P52657 109 aa16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 PTPAQ15257 358 aa16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 INTS10Q9NVR2 710 aaKnown RBP16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 SMG5Q9UPR3 1016 aaKnown RBP16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 POLR2EP19388 210 aaKnown RBP16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 TCF7P36402 384 aaPredicted RBP16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 COLEC12Q5KU26 742 aa16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 FBXL19Q6PCT2 694 aa16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 ACOT1Q86TX2 421 aa16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 ANKFN1Q8N957 763 aa16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 DDX18Q9NVP1 670 aaKnown RBP16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 PIH1D1Q9NWS0 290 aaKnown RBP16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 MORC2Q9Y6X9 1032 aaPredicted RBP16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 AMHP03971 560 aa16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 FGFR3P22607 806 aa16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 HNF4AP41235 474 aa16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 CASP9P55211 416 aa16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 NUP107P57740 925 aa16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 BYSLQ13895 437 aaKnown RBP16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 FAM171A1Q5VUB5 890 aa16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 C9orf131Q5VYM1 1079 aa16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 CCDC54Q8NEL0 328 aa16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 ZNF112Q9UJU3 913 aa16.71■□□□□ 0.27
CACNA1A-258ENST00000638029 LIN7AO14910 233 aaPredicted RBP16.71■□□□□ 0.26
CACNA1A-258ENST00000638029 KPNA6O60684 536 aa16.71■□□□□ 0.26
CACNA1A-258ENST00000638029 LSP1P33241 339 aa16.71■□□□□ 0.26
CACNA1A-258ENST00000638029 SERPINB9P50453 376 aa16.71■□□□□ 0.26
CACNA1A-258ENST00000638029 PMF1Q6P1K2 205 aa16.71■□□□□ 0.26
CACNA1A-258ENST00000638029 RCVRNP35243 200 aa16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 SPRP35270 261 aaPredicted RBP16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 EMC2Q15006 297 aa16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 TSHZ1Q6ZSZ6 1077 aa16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 CLEC10AQ8IUN9 316 aa16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 TP53INP1Q96A56 240 aa16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 MCIDASD6RGH6 385 aa16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 HNRNPH1P31943 449 aaKnown RBP16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 MTAPQ13126 283 aa16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 AGAP9Q5VTM2 703 aa16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 POTEAQ6S8J7 498 aa16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 RERGQ96A58 199 aaPredicted RBP16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 PPP1R14BQ96C90 147 aa16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 C19orf81C9J6K1 198 aa16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 RGL2O15211 777 aa16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 CES1P23141 567 aa16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 FMO5P49326 533 aa16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 SPIDRQ14159 915 aa16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 SUZ12Q15022 739 aaKnown RBP16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 PPP1R13LQ8WUF5 828 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms