RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 TXLNBQ8N3L3 684 aa16.62■□□□□ 0.25
CLN6-216ENST00000636876 OSCP1Q8WVF1 389 aa16.62■□□□□ 0.25
CLN6-216ENST00000636876 AZIN2Q96A70 460 aa16.62■□□□□ 0.25
CLN6-216ENST00000636876 OTUB2Q96DC9 234 aa16.62■□□□□ 0.25
CLN6-216ENST00000636876 ZFYVE19Q96K21 471 aa16.62■□□□□ 0.25
CLN6-216ENST00000636876 BTBD6Q96KE9 485 aa16.62■□□□□ 0.25
CLN6-216ENST00000636876 FAM83CQ9BQN1 747 aa16.62■□□□□ 0.25
CLN6-216ENST00000636876 RAB6CQ9H0N0 254 aa16.62■□□□□ 0.25
CLN6-216ENST00000636876 LINC00597Q9H2U6 94 aa16.62■□□□□ 0.25
CLN6-216ENST00000636876 KCNF1Q9H3M0 494 aa16.62■□□□□ 0.25
CLN6-216ENST00000636876 BRD9Q9H8M2 597 aa16.62■□□□□ 0.25
CLN6-216ENST00000636876 OSGEPQ9NPF4 335 aa16.62■□□□□ 0.25
CLN6-216ENST00000636876 IP6K2Q9UHH9 426 aa16.62■□□□□ 0.25
CLN6-216ENST00000636876 AGO1Q9UL18 857 aaKnown RBP16.62■□□□□ 0.25
CLN6-216ENST00000636876 PAXBP1Q9Y5B6 917 aa16.62■□□□□ 0.25
CLN6-216ENST00000636876 A0A0A6YYK5 440 aaPredicted RBP16.61■□□□□ 0.25
CLN6-216ENST00000636876 KCNU1A8MYU2 1149 aa16.61■□□□□ 0.25
CLN6-216ENST00000636876 MYO1FO00160 1098 aa16.61■□□□□ 0.25
CLN6-216ENST00000636876 MOCS2O96007 188 aaPredicted RBP16.61■□□□□ 0.25
CLN6-216ENST00000636876 SLC11A2P49281 568 aa16.61■□□□□ 0.25
CLN6-216ENST00000636876 PIGHQ14442 188 aaPredicted RBP16.61■□□□□ 0.25
CLN6-216ENST00000636876 ACAP1Q15027 740 aa16.61■□□□□ 0.25
CLN6-216ENST00000636876 EML3Q32P44 896 aa16.61■□□□□ 0.25
CLN6-216ENST00000636876 FAM131BQ86XD5 332 aa16.61■□□□□ 0.25
CLN6-216ENST00000636876 NIPA2Q8N8Q9 360 aa16.61■□□□□ 0.25
CLN6-216ENST00000636876 ATP6V0D2Q8N8Y2 350 aa16.61■□□□□ 0.25
CLN6-216ENST00000636876 BTN2A3PQ96KV6 586 aa16.61■□□□□ 0.25
CLN6-216ENST00000636876 LACRTQ9GZZ8 138 aa16.61■□□□□ 0.25
CLN6-216ENST00000636876 WDCPQ9H6R7 721 aa16.61■□□□□ 0.25
CLN6-216ENST00000636876 SLC12A6Q9UHW9 1150 aa16.61■□□□□ 0.25
CLN6-216ENST00000636876 LCMT1Q9UIC8 334 aa16.61■□□□□ 0.25
CLN6-216ENST00000636876 SORCS3Q9UPU3 1222 aa16.61■□□□□ 0.25
CLN6-216ENST00000636876 BTNL10A8MVZ5 291 aa16.6■□□□□ 0.25
CLN6-216ENST00000636876 ARNTLO00327 626 aa16.6■□□□□ 0.25
CLN6-216ENST00000636876 NARSO43776 548 aaKnown RBP16.6■□□□□ 0.25
CLN6-216ENST00000636876 ACSL4O60488 711 aa16.6■□□□□ 0.25
CLN6-216ENST00000636876 RNF8O76064 485 aa16.6■□□□□ 0.25
CLN6-216ENST00000636876 SRFP11831 508 aa16.6■□□□□ 0.25
CLN6-216ENST00000636876 ARSAP15289 507 aa16.6■□□□□ 0.25
CLN6-216ENST00000636876 HADHBP55084 474 aaKnown RBP16.6■□□□□ 0.25
CLN6-216ENST00000636876 TRIM68Q6AZZ1 485 aa16.6■□□□□ 0.25
CLN6-216ENST00000636876 FAM217AQ8IXS0 508 aa16.6■□□□□ 0.25
CLN6-216ENST00000636876 IRF7Q92985 503 aa16.6■□□□□ 0.25
CLN6-216ENST00000636876 ATP2A3Q93084 1043 aa16.6■□□□□ 0.25
CLN6-216ENST00000636876 ZNF830Q96NB3 372 aaPredicted RBP16.6■□□□□ 0.25
CLN6-216ENST00000636876 NCAPGQ9BPX3 1015 aa16.6■□□□□ 0.25
CLN6-216ENST00000636876 TKTL2Q9H0I9 626 aa16.6■□□□□ 0.25
CLN6-216ENST00000636876 EPHX3Q9H6B9 360 aa16.6■□□□□ 0.25
CLN6-216ENST00000636876 HPS4Q9NQG7 708 aa16.6■□□□□ 0.25
CLN6-216ENST00000636876 SLC2A4RGQ9NR83 387 aa16.6■□□□□ 0.25
CLN6-216ENST00000636876 ARHGEF38Q9NXL2 777 aa16.6■□□□□ 0.25
CLN6-216ENST00000636876 XPO7Q9UIA9 1087 aaKnown RBP16.6■□□□□ 0.25
CLN6-216ENST00000636876 STOML2Q9UJZ1 356 aa16.6■□□□□ 0.25
CLN6-216ENST00000636876 DUSP12Q9UNI6 340 aa16.6■□□□□ 0.25
CLN6-216ENST00000636876 LRCH4O75427 683 aa16.59■□□□□ 0.25
CLN6-216ENST00000636876 PROSCO94903 275 aa16.59■□□□□ 0.25
CLN6-216ENST00000636876 NFATC1O95644 943 aa16.59■□□□□ 0.25
CLN6-216ENST00000636876 NOP2P46087 812 aaKnown RBP16.59■□□□□ 0.25
CLN6-216ENST00000636876 TNK2Q07912 1038 aa16.59■□□□□ 0.25
CLN6-216ENST00000636876 MTA1Q13330 715 aa16.59■□□□□ 0.25
CLN6-216ENST00000636876 ADGRF1Q5T601 910 aa16.59■□□□□ 0.25
CLN6-216ENST00000636876 NADSYN1Q6IA69 706 aa16.59■□□□□ 0.25
CLN6-216ENST00000636876 ADGRG2Q8IZP9 1017 aa16.59■□□□□ 0.25
CLN6-216ENST00000636876 CPXM2Q8N436 756 aa16.59■□□□□ 0.25
CLN6-216ENST00000636876 ARFGAP1Q8N6T3 406 aa16.59■□□□□ 0.25
CLN6-216ENST00000636876 EBF3Q9H4W6 596 aa16.59■□□□□ 0.25
CLN6-216ENST00000636876 TRPV5Q9NQA5 729 aa16.59■□□□□ 0.25
CLN6-216ENST00000636876 ANLNQ9NQW6 1124 aa16.59■□□□□ 0.25
CLN6-216ENST00000636876 SALL4Q9UJQ4 1053 aa16.59■□□□□ 0.25
CLN6-216ENST00000636876 DUSP10Q9Y6W6 482 aa16.59■□□□□ 0.25
CLN6-216ENST00000636876 MUC6Q6W4X9 2439 aa16.59■□□□□ 0.25
CLN6-216ENST00000636876 A0A0U1RQJ8 604 aa16.58■□□□□ 0.24
CLN6-216ENST00000636876 I6L893 689 aaPredicted RBP16.58■□□□□ 0.24
CLN6-216ENST00000636876 GFRA2O00451 464 aa16.58■□□□□ 0.24
CLN6-216ENST00000636876 PAGE1O75459 146 aa16.58■□□□□ 0.24
CLN6-216ENST00000636876 CCDC175P0C221 793 aa16.58■□□□□ 0.24
CLN6-216ENST00000636876 MIPP30301 263 aa16.58■□□□□ 0.24
CLN6-216ENST00000636876 MAN1A1P33908 653 aa16.58■□□□□ 0.24
CLN6-216ENST00000636876 ADRA1BP35368 520 aa16.58■□□□□ 0.24
CLN6-216ENST00000636876 PCK1P35558 622 aa16.58■□□□□ 0.24
CLN6-216ENST00000636876 CHKAP35790 457 aa16.58■□□□□ 0.24
CLN6-216ENST00000636876 ARHGAP25P42331 645 aa16.58■□□□□ 0.24
CLN6-216ENST00000636876 PFKPQ01813 784 aa16.58■□□□□ 0.24
CLN6-216ENST00000636876 KIF5AQ12840 1032 aa16.58■□□□□ 0.24
CLN6-216ENST00000636876 RUNX3Q13761 415 aa16.58■□□□□ 0.24
CLN6-216ENST00000636876 MESDQ14696 234 aa16.58■□□□□ 0.24
CLN6-216ENST00000636876 ITPRIPL2Q3MIP1 535 aa16.58■□□□□ 0.24
CLN6-216ENST00000636876 FAM133BQ5BKY9 247 aaKnown RBP16.58■□□□□ 0.24
CLN6-216ENST00000636876 PIK3R6Q5UE93 754 aa16.58■□□□□ 0.24
CLN6-216ENST00000636876 SCYL2Q6P3W7 929 aa16.58■□□□□ 0.24
CLN6-216ENST00000636876 CPA6Q8N4T0 437 aa16.58■□□□□ 0.24
CLN6-216ENST00000636876 ATRIPQ8WXE1 791 aa16.58■□□□□ 0.24
CLN6-216ENST00000636876 DNASE1L2Q92874 299 aa16.58■□□□□ 0.24
CLN6-216ENST00000636876 NTAN1Q96AB6 310 aa16.58■□□□□ 0.24
CLN6-216ENST00000636876 DDX50Q9BQ39 737 aaKnown RBP16.58■□□□□ 0.24
CLN6-216ENST00000636876 TMPRSS4Q9NRS4 437 aa16.58■□□□□ 0.24
CLN6-216ENST00000636876 MUTYHQ9UIF7 546 aa16.58■□□□□ 0.24
CLN6-216ENST00000636876 GOLGA6L7A0A1B0GV03 622 aa16.57■□□□□ 0.24
CLN6-216ENST00000636876 TMEM110-MUSTN1A8MSY1 372 aa16.57■□□□□ 0.24
CLN6-216ENST00000636876 CYP17A1P05093 508 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms