RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 MDM1Q8TC05 714 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 KAT2BQ92831 832 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 SLC40A1Q9NP59 571 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 STK39Q9UEW8 545 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 IPPQ9Y573 584 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 TCRBV5S1A1TA0A578 114 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 TCRBV7S2A1N4TA0A589 114 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 GYG2O15488 501 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 PTPN4P29074 926 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 L1CAMP32004 1257 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 CBLBQ13191 982 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 PPP1R26Q5T8A7 1209 aaPredicted RBP4.69□□□□□ -1.66
SCN1A-210ENST00000635776 C6orf89Q6UWU4 347 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 C4orf33Q8N1A6 199 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.69□□□□□ -1.66
SCN1A-210ENST00000635776 ZNF668Q96K58 619 aaPredicted RBP4.69□□□□□ -1.66
SCN1A-210ENST00000635776 CEP295NLQ96MC4 621 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 TMEM237Q96Q45 408 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 CTNNAL1Q9UBT7 734 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 PCDHA11Q9Y5I1 949 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 ARHGAP42A6NI28 874 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 OR6C75A6NL08 312 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 C9IYK1 514 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 TRIM66O15016 1216 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 HSPA4LO95757 839 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 RBL1P28749 1068 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 EPHB2P29323 1055 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 MAP2K2P36507 400 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 GJA9P57773 515 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 IRX1P78414 480 aaPredicted RBP4.69□□□□□ -1.66
SCN1A-210ENST00000635776 ACAD11Q709F0 780 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 PRUNE1Q86TP1 453 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 C2orf15Q8WU43 125 aaKnown RBP4.69□□□□□ -1.66
SCN1A-210ENST00000635776 MAML1Q92585 1016 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 CMTM5Q96DZ9 223 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 EML4Q9HC35 981 aaKnown RBP4.69□□□□□ -1.66
SCN1A-210ENST00000635776 ENTPD7Q9NQZ7 604 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 FAM105AQ9NUU6 356 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 FARP1Q9Y4F1 1045 aaPredicted RBP4.69□□□□□ -1.66
SCN1A-210ENST00000635776 FAM189A1O60320 539 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 ZNF623O75123 536 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 GJB6O95452 261 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 NQO1P15559 274 aaKnown RBP4.69□□□□□ -1.66
SCN1A-210ENST00000635776 PCSK2P16519 638 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 CES1P23141 567 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 ANKRD20A2Q5SQ80 823 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 ANKRD20A1Q5TYW2 823 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 ZNF280DQ6N043 979 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 POTEHQ6S545 545 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 TTC8Q8TAM2 541 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 PIP4K2CQ8TBX8 421 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 UNC5CO95185 931 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 EOMESO95936 686 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 ATP13A4Q4VNC1 1196 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 RASSF3Q86WH2 238 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 COLGALT1Q8NBJ5 622 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 CCT6BQ92526 530 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 ERP27Q96DN0 273 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 NSL1Q96IY1 281 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 ASB2Q96Q27 587 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 LOXHD1Q8IVV2 1947 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 ADRA1BP35368 520 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 RENBPP51606 427 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 NME3Q13232 169 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 BSPRYQ5W0U4 402 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 MAP1SQ66K74 1059 aaPredicted RBP4.69□□□□□ -1.66
SCN1A-210ENST00000635776 OLFML1Q6UWY5 402 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 FAM35AQ86V20 835 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 EFHBQ8N7U6 833 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 PDZD8Q8NEN9 1154 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 UPF1Q92900 1129 aaKnown RBP eCLIP4.69□□□□□ -1.66
SCN1A-210ENST00000635776 ZNF317Q96PQ6 595 aaPredicted RBP4.69□□□□□ -1.66
SCN1A-210ENST00000635776 KRT82Q9NSB4 513 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 THAP1Q9NVV9 213 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 CPA4Q9UI42 421 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 MOXD2PA6NHM9 499 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 SOCS7O14512 581 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 SEPT4O43236 478 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 PAPSS1O43252 624 aaPredicted RBP4.69□□□□□ -1.66
SCN1A-210ENST00000635776 MYCNP04198 464 aaPredicted RBP4.69□□□□□ -1.66
SCN1A-210ENST00000635776 SERPINE1P05121 402 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 STX1BP61266 288 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 PKN2Q16513 984 aaKnown RBP4.69□□□□□ -1.66
SCN1A-210ENST00000635776 MAP7D1Q3KQU3 841 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 OVOS1Q6IE37 1185 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 FUKQ8N0W3 1084 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 MYH4Q9Y623 1939 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 TRAFD1O14545 582 aaPredicted RBP4.69□□□□□ -1.66
SCN1A-210ENST00000635776 B3GAT3O94766 335 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 ASMTLO95671 621 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 SNAI1O95863 264 aaPredicted RBP4.69□□□□□ -1.66
SCN1A-210ENST00000635776 ADSLP30566 484 aaPredicted RBP4.69□□□□□ -1.66
SCN1A-210ENST00000635776 TEDDM1Q5T9Z0 273 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 RAPH1Q70E73 1250 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 SDCCAG8Q86SQ7 713 aaPredicted RBP4.69□□□□□ -1.66
SCN1A-210ENST00000635776 CENPIQ92674 756 aaPredicted RBP4.69□□□□□ -1.66
SCN1A-210ENST00000635776 CSPG4P5Q96PW8 444 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 KCNK16Q96T55 309 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 XPNPEP3Q9NQH7 507 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 VTI1BQ9UEU0 232 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms