RNA–Protein interactions for RNA: ENST00000634781.1

SMARCA2-229, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 1 (best) BASIC

Gene SMARCA2, Length 1,106 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-229	ENST00000634781	AMIGO2	Q86SJ2	522 aa		4.78	□□□□□ -1.64
SMARCA2-229	ENST00000634781	ADGRG3	Q86Y34	549 aa		4.78	□□□□□ -1.64
SMARCA2-229	ENST00000634781	GATAD2A	Q86YP4	633 aa		4.78	□□□□□ -1.64
SMARCA2-229	ENST00000634781	C12orf76	Q8N812	135 aa	Predicted RBP	4.78	□□□□□ -1.64
SMARCA2-229	ENST00000634781	IPO4	Q8TEX9	1081 aa	Known RBP	4.78	□□□□□ -1.64
SMARCA2-229	ENST00000634781	WDR60	Q8WVS4	1066 aa		4.78	□□□□□ -1.64
SMARCA2-229	ENST00000634781	POF1B	Q8WVV4	589 aa		4.78	□□□□□ -1.64
SMARCA2-229	ENST00000634781	C18orf8	Q96DM3	657 aa		4.78	□□□□□ -1.64
SMARCA2-229	ENST00000634781	LTV1	Q96GA3	475 aa	Predicted RBP	4.78	□□□□□ -1.64
SMARCA2-229	ENST00000634781	WDYHV1	Q96HA8	205 aa		4.78	□□□□□ -1.64
SMARCA2-229	ENST00000634781	CCDC17	Q96LX7	622 aa		4.78	□□□□□ -1.64
SMARCA2-229	ENST00000634781	FYTTD1	Q96QD9	318 aa	Known RBP	4.78	□□□□□ -1.64
SMARCA2-229	ENST00000634781	PRPF18	Q99633	342 aa	Known RBP	4.78	□□□□□ -1.64
SMARCA2-229	ENST00000634781	RXFP3	Q9NSD7	469 aa		4.78	□□□□□ -1.64
SMARCA2-229	ENST00000634781	MAP3K20	Q9NYL2	800 aa	Known RBP	4.78	□□□□□ -1.64
SMARCA2-229	ENST00000634781	SCIN	Q9Y6U3	715 aa		4.78	□□□□□ -1.64
SMARCA2-229	ENST00000634781	KDM5C	P41229	1560 aa		4.78	□□□□□ -1.64
SMARCA2-229	ENST00000634781	RERE	Q9P2R6	1566 aa		4.78	□□□□□ -1.64
SMARCA2-229	ENST00000634781	CDK13	Q14004	1512 aa	Known RBP	4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	ZNF142	P52746	1687 aa	Predicted RBP	4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	TCOF1	Q13428	1488 aa	Known RBP	4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	SHANK2	Q9UPX8	1470 aa		4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	ABCA6	Q8N139	1617 aa		4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	PNMA6E	A0A0J9YXQ4	647 aa		4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	BTBD19	C9JJ37	291 aa		4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	UBE2Q2L	H0YL09	131 aa		4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	MT-CO3	P00414	261 aa		4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	NPPB	P16860	134 aa		4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	PTH2R	P49190	550 aa		4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	COPB1	P53618	953 aa	Known RBP	4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	ALDH18A1	P54886	795 aa	Known RBP	4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	PSG6	Q00889	435 aa		4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	CCDC15	Q0P6D6	951 aa		4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	LMAN2	Q12907	356 aa		4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	MTAP	Q13126	283 aa		4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	SEMA3B	Q13214	749 aa		4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	FHL3	Q13643	280 aa		4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	PTK2B	Q14289	1009 aa		4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	KCNJ12	Q14500	433 aa		4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	PFKFB4	Q16877	469 aa		4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	P3H1	Q32P28	736 aa		4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	KRTAP15-1	Q3LI76	137 aa		4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	ZACN	Q401N2	412 aa		4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	RNASE12	Q5GAN4	147 aa	Known RBP	4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	TMEM196	Q5HYL7	178 aa		4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	WDR78	Q5VTH9	848 aa		4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	KIRREL2	Q6UWL6	708 aa		4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	SERPINA13P	Q6UXR4	307 aa		4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	RD3	Q7Z3Z2	195 aa		4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	ZNF354C	Q86Y25	554 aa		4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	NRSN1	Q8IZ57	195 aa		4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	AFAP1	Q8N556	730 aa		4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	FAM98A	Q8NCA5	519 aa	Known RBP	4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	ADAMTS18	Q8TE60	1221 aa		4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	HS6ST2	Q96MM7	605 aa		4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	IGSF9	Q9P2J2	1179 aa		4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	LPAR3	Q9UBY5	353 aa		4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	ADAM21	Q9UKJ8	722 aa		4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	LAS1L	Q9Y4W2	734 aa	Known RBP	4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	COX11	Q9Y6N1	276 aa		4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	DGKB	Q9Y6T7	804 aa		4.77	□□□□□ -1.65
SMARCA2-229	ENST00000634781	SETD1B	Q9UPS6	1966 aa	Known RBP	4.76	□□□□□ -1.65
SMARCA2-229	ENST00000634781	PRX	Q9BXM0	1461 aa		4.76	□□□□□ -1.65
SMARCA2-229	ENST00000634781	RNF17	Q9BXT8	1623 aa	Known RBP	4.76	□□□□□ -1.65
SMARCA2-229	ENST00000634781	hCG_1642624	A0A1W2PR95	340 aa		4.76	□□□□□ -1.65
SMARCA2-229	ENST00000634781	PRRT4	C9JH25	899 aa		4.76	□□□□□ -1.65
SMARCA2-229	ENST00000634781		J3KTA2	159 aa		4.76	□□□□□ -1.65
SMARCA2-229	ENST00000634781	GCAT	O75600	419 aa		4.76	□□□□□ -1.65
SMARCA2-229	ENST00000634781	C1R	P00736	705 aa		4.76	□□□□□ -1.65
SMARCA2-229	ENST00000634781	DRD1	P21728	446 aa		4.76	□□□□□ -1.65
SMARCA2-229	ENST00000634781	FPR3	P25089	353 aa		4.76	□□□□□ -1.65
SMARCA2-229	ENST00000634781	MCM5	P33992	734 aa		4.76	□□□□□ -1.65
SMARCA2-229	ENST00000634781	PBX1	P40424	430 aa		4.76	□□□□□ -1.65
SMARCA2-229	ENST00000634781	CCT5	P48643	541 aa		4.76	□□□□□ -1.65
SMARCA2-229	ENST00000634781	CFHR3	Q02985	330 aa		4.76	□□□□□ -1.65
SMARCA2-229	ENST00000634781	DNASE1L3	Q13609	305 aa		4.76	□□□□□ -1.65
SMARCA2-229	ENST00000634781	BLMH	Q13867	455 aa		4.76	□□□□□ -1.65
SMARCA2-229	ENST00000634781	ELF2	Q15723	593 aa		4.76	□□□□□ -1.65
SMARCA2-229	ENST00000634781	AASDH	Q4L235	1098 aa	Predicted RBP	4.76	□□□□□ -1.65
SMARCA2-229	ENST00000634781	MEX3C	Q5U5Q3	659 aa	Known RBP	4.76	□□□□□ -1.65
SMARCA2-229	ENST00000634781	PTF1A	Q7RTS3	328 aa		4.76	□□□□□ -1.65
SMARCA2-229	ENST00000634781	BCDIN3D	Q7Z5W3	292 aa	Known RBP	4.76	□□□□□ -1.65
SMARCA2-229	ENST00000634781	CLASRP	Q8N2M8	674 aa	Known RBP	4.76	□□□□□ -1.65
SMARCA2-229	ENST00000634781	FAM71B	Q8TC56	605 aa		4.76	□□□□□ -1.65
SMARCA2-229	ENST00000634781	REPS1	Q96D71	796 aa		4.76	□□□□□ -1.65
SMARCA2-229	ENST00000634781	SCLT1	Q96NL6	688 aa		4.76	□□□□□ -1.65
SMARCA2-229	ENST00000634781	MMS19	Q96T76	1030 aa		4.76	□□□□□ -1.65
SMARCA2-229	ENST00000634781	USP29	Q9HBJ7	922 aa		4.76	□□□□□ -1.65
SMARCA2-229	ENST00000634781	OBP2B	Q9NPH6	170 aa		4.76	□□□□□ -1.65
SMARCA2-229	ENST00000634781	GAR1	Q9NY12	217 aa	Known RBP	4.76	□□□□□ -1.65
SMARCA2-229	ENST00000634781	MAFF	Q9ULX9	164 aa		4.76	□□□□□ -1.65
SMARCA2-229	ENST00000634781	NFU1	Q9UMS0	254 aa		4.76	□□□□□ -1.65
SMARCA2-229	ENST00000634781	RPS6KL1	Q9Y6S9	549 aa		4.76	□□□□□ -1.65
SMARCA2-229	ENST00000634781	MORC2	Q9Y6X9	1032 aa	Predicted RBP	4.76	□□□□□ -1.65
SMARCA2-229	ENST00000634781	MROH2A	A6NES4	1674 aa		4.76	□□□□□ -1.65
SMARCA2-229	ENST00000634781	A2ML1	A8K2U0	1454 aa		4.75	□□□□□ -1.65
SMARCA2-229	ENST00000634781	MLH3	Q9UHC1	1453 aa		4.75	□□□□□ -1.65
SMARCA2-229	ENST00000634781	LRRC3C	A6NJW4	275 aa		4.75	□□□□□ -1.65
SMARCA2-229	ENST00000634781	LGALS16	A8MUM7	142 aa		4.75	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms