RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 DNAJB12Q9NXW2 375 aaKnown RBP5.13□□□□□ -1.59
LINC00550-201ENST00000629293 ANGPTL2Q9UKU9 493 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 SLC8A2Q9UPR5 921 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 SOBPA7XYQ1 873 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 LACTBL1A8MY62 500 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 SLC30A4O14863 429 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 ACOT2P49753 483 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 MEA1Q16626 185 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 PSAPL1Q6NUJ1 521 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 CNNM4Q6P4Q7 775 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 KBTBD6Q86V97 674 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 ANKRD20A12PQ8NF67 263 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 BPIFB1Q8TDL5 484 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 FAM84AQ96KN4 292 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 SENP8Q96LD8 212 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 IRX2Q9BZI1 471 aaPredicted RBP5.13□□□□□ -1.59
LINC00550-201ENST00000629293 UBXN6Q9BZV1 441 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 VPS16Q9H269 839 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 RPF1Q9H9Y2 349 aaKnown RBP5.13□□□□□ -1.59
LINC00550-201ENST00000629293 TRIM33Q9UPN9 1127 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 REXO2Q9Y3B8 237 aaKnown RBP5.13□□□□□ -1.59
LINC00550-201ENST00000629293 K7ENM7 598 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 PSMA7O14818 248 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 CHADO15335 359 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 PEX14O75381 377 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 GSTP1P09211 210 aaKnown RBP5.12□□□□□ -1.59
LINC00550-201ENST00000629293 PNMA6AP0CW24 399 aaPredicted RBP5.12□□□□□ -1.59
LINC00550-201ENST00000629293 ARAFP10398 606 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 PPP1R2P41236 205 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 CTBSQ01459 385 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 TUBB2AQ13885 445 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.12□□□□□ -1.59
LINC00550-201ENST00000629293 N4BP2L1Q5TBK1 243 aaPredicted RBP5.12□□□□□ -1.59
LINC00550-201ENST00000629293 LONP2Q86WA8 852 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 MYCT1Q8N699 235 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 ZSCAN1Q8NBB4 408 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 ACRBPQ8NEB7 543 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 GPBAR1Q8TDU6 330 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 WDR89Q96FK6 387 aaPredicted RBP5.12□□□□□ -1.59
LINC00550-201ENST00000629293 TUBB2BQ9BVA1 445 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 TPSD1Q9BZJ3 242 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 ARHGAP28Q9P2N2 729 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 MYO1AQ9UBC5 1043 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 CAPN11Q9UMQ6 739 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 UBQLN1Q9UMX0 589 aaKnown RBP5.12□□□□□ -1.59
LINC00550-201ENST00000629293 CCL26Q9Y258 94 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 CITO14578 2027 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 TTC26A0AVF1 554 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 MTMR11A4FU01 709 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 TISP43B9A030 160 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 MEFVO15553 781 aaPredicted RBP5.12□□□□□ -1.59
LINC00550-201ENST00000629293 ATP8B1O43520 1251 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 KIF5CO60282 957 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 CLTAP09496 248 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 KCNE1P15382 129 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 NOVA1P51513 510 aaKnown RBP5.12□□□□□ -1.59
LINC00550-201ENST00000629293 DGKEP52429 567 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 AMPD2Q01433 879 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 UBXN1Q04323 297 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 GRSF1Q12849 480 aaKnown RBP eCLIP5.12□□□□□ -1.59
LINC00550-201ENST00000629293 STIM1Q13586 685 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 CSRP2Q16527 193 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 PPP2R5EQ16537 467 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 ITPRIPL2Q3MIP1 535 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 RNF43Q68DV7 783 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 TXNDC8Q6A555 127 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 CENPPQ6IPU0 288 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 KIAA1211LQ6NV74 962 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 ALKAL1Q6UXT8 129 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 KIAA0895Q8NCT3 520 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 PLPPR2Q96GM1 343 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 PNMA5Q96PV4 448 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 PI4K2AQ9BTU6 479 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 MSTO1Q9BUK6 570 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 GPR88Q9GZN0 384 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 C8orf33Q9H7E9 229 aaPredicted RBP5.12□□□□□ -1.59
LINC00550-201ENST00000629293 PTPRHQ9HD43 1115 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 BLOC1S4Q9NUP1 217 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 THG1LQ9NWX6 298 aaKnown RBP5.12□□□□□ -1.59
LINC00550-201ENST00000629293 STK17AQ9UEE5 414 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 CDC23Q9UJX2 597 aa5.12□□□□□ -1.59
LINC00550-201ENST00000629293 K7ESF4 209 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 XPOTO43592 962 aaKnown RBP5.11□□□□□ -1.59
LINC00550-201ENST00000629293 CKMP06732 381 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 NFICP08651 508 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 ODC1P11926 461 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 ARSAP15289 507 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 L1CAMP32004 1257 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 NTF4P34130 210 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 KRT9P35527 623 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 GPR15P49685 360 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 MAPK7Q13164 816 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 LRRC14Q15048 493 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 TMEM119Q4V9L6 283 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 MIIPQ5JXC2 388 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 STPG1Q5TH74 334 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 ZNF468Q5VIY5 522 aaPredicted RBP5.11□□□□□ -1.59
LINC00550-201ENST00000629293 WSCD1Q658N2 575 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 JADE1Q6IE81 842 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 ANO7Q6IWH7 933 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms