RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 TTC39BQ5VTQ0 682 aaPredicted RBP14.56□□□□□ -0.08
SNRPA1-216ENST00000626000 SPECC1LQ69YQ0 1117 aa14.56□□□□□ -0.08
SNRPA1-216ENST00000626000 IRF2BP2Q7Z5L9 587 aa14.56□□□□□ -0.08
SNRPA1-216ENST00000626000 TMEM25Q86YD3 366 aa14.56□□□□□ -0.08
SNRPA1-216ENST00000626000 DEFB106AQ8N104 65 aa14.56□□□□□ -0.08
SNRPA1-216ENST00000626000 SLC20A1Q8WUM9 679 aa14.56□□□□□ -0.08
SNRPA1-216ENST00000626000 CPA5Q8WXQ8 436 aa14.56□□□□□ -0.08
SNRPA1-216ENST00000626000 CHFRQ96EP1 664 aa14.56□□□□□ -0.08
SNRPA1-216ENST00000626000 TRIM11Q96F44 468 aa14.56□□□□□ -0.08
SNRPA1-216ENST00000626000 PGAP3Q96FM1 320 aaPredicted RBP14.56□□□□□ -0.08
SNRPA1-216ENST00000626000 SLC39A13Q96H72 371 aa14.56□□□□□ -0.08
SNRPA1-216ENST00000626000 SEMA4AQ9H3S1 761 aa14.56□□□□□ -0.08
SNRPA1-216ENST00000626000 PRMT8Q9NR22 394 aaPredicted RBP14.56□□□□□ -0.08
SNRPA1-216ENST00000626000 DNAJC17Q9NVM6 304 aaKnown RBP14.56□□□□□ -0.08
SNRPA1-216ENST00000626000 ADAM22Q9P0K1 906 aa14.56□□□□□ -0.08
SNRPA1-216ENST00000626000 CAPN11Q9UMQ6 739 aa14.56□□□□□ -0.08
SNRPA1-216ENST00000626000 SLC27A6Q9Y2P4 619 aa14.56□□□□□ -0.08
SNRPA1-216ENST00000626000 SCAMP3O14828 347 aaKnown RBP14.55□□□□□ -0.08
SNRPA1-216ENST00000626000 GZMAP12544 262 aa14.55□□□□□ -0.08
SNRPA1-216ENST00000626000 CHRNB2P17787 502 aa14.55□□□□□ -0.08
SNRPA1-216ENST00000626000 DGKGP49619 791 aa14.55□□□□□ -0.08
SNRPA1-216ENST00000626000 MTAPQ13126 283 aa14.55□□□□□ -0.08
SNRPA1-216ENST00000626000 EIF4HQ15056 248 aaKnown RBP14.55□□□□□ -0.08
SNRPA1-216ENST00000626000 TSR1Q2NL82 804 aaKnown RBP14.55□□□□□ -0.08
SNRPA1-216ENST00000626000 GAB4Q2WGN9 574 aa14.55□□□□□ -0.08
SNRPA1-216ENST00000626000 SLC25A52Q3SY17 297 aa14.55□□□□□ -0.08
SNRPA1-216ENST00000626000 SYPL2Q5VXT5 272 aa14.55□□□□□ -0.08
SNRPA1-216ENST00000626000 MMS22LQ6ZRQ5 1243 aa14.55□□□□□ -0.08
SNRPA1-216ENST00000626000 TPGS1Q6ZTW0 290 aa14.55□□□□□ -0.08
SNRPA1-216ENST00000626000 TERB1Q8NA31 727 aa14.55□□□□□ -0.08
SNRPA1-216ENST00000626000 HJURPQ8NCD3 748 aaPredicted RBP14.55□□□□□ -0.08
SNRPA1-216ENST00000626000 C3orf20Q8ND61 904 aa14.55□□□□□ -0.08
SNRPA1-216ENST00000626000 DDI1Q8WTU0 396 aa14.55□□□□□ -0.08
SNRPA1-216ENST00000626000 RNF34Q969K3 372 aa14.55□□□□□ -0.08
SNRPA1-216ENST00000626000 TMA16Q96EY4 203 aaKnown RBP14.55□□□□□ -0.08
SNRPA1-216ENST00000626000 FCRL2Q96LA5 508 aaPredicted RBP14.55□□□□□ -0.08
SNRPA1-216ENST00000626000 XPO4Q9C0E2 1151 aaKnown RBP14.55□□□□□ -0.08
SNRPA1-216ENST00000626000 TJP2Q9UDY2 1190 aa14.55□□□□□ -0.08
SNRPA1-216ENST00000626000 TBC1D3BA6NDS4 549 aa14.54□□□□□ -0.08
SNRPA1-216ENST00000626000 M0QYT0 321 aa14.54□□□□□ -0.08
SNRPA1-216ENST00000626000 TIMM44O43615 452 aa14.54□□□□□ -0.08
SNRPA1-216ENST00000626000 EGFP01133 1207 aa14.54□□□□□ -0.08
SNRPA1-216ENST00000626000 OXCT1P55809 520 aa14.54□□□□□ -0.08
SNRPA1-216ENST00000626000 EIF4EBP2Q13542 120 aaPredicted RBP14.54□□□□□ -0.08
SNRPA1-216ENST00000626000 FYB2Q5VWT5 728 aa14.54□□□□□ -0.08
SNRPA1-216ENST00000626000 ACAD10Q6JQN1 1059 aa14.54□□□□□ -0.08
SNRPA1-216ENST00000626000 SARM1Q6SZW1 724 aa14.54□□□□□ -0.08
SNRPA1-216ENST00000626000 SYT13Q7L8C5 426 aa14.54□□□□□ -0.08
SNRPA1-216ENST00000626000 DRC7Q8IY82 874 aa14.54□□□□□ -0.08
SNRPA1-216ENST00000626000 CAMKK1Q8N5S9 505 aa14.54□□□□□ -0.08
SNRPA1-216ENST00000626000 RNF214Q8ND24 703 aa14.54□□□□□ -0.08
SNRPA1-216ENST00000626000 PRSS33Q8NF86 280 aa14.54□□□□□ -0.08
SNRPA1-216ENST00000626000 WFIKKN2Q8TEU8 576 aa14.54□□□□□ -0.08
SNRPA1-216ENST00000626000 UCMAQ8WVF2 138 aa14.54□□□□□ -0.08
SNRPA1-216ENST00000626000 NT5C3BQ969T7 300 aa14.54□□□□□ -0.08
SNRPA1-216ENST00000626000 WBP2Q969T9 261 aa14.54□□□□□ -0.08
SNRPA1-216ENST00000626000 PPP1R9BQ96SB3 815 aa14.54□□□□□ -0.08
SNRPA1-216ENST00000626000 NPY6RQ99463 290 aa14.54□□□□□ -0.08
SNRPA1-216ENST00000626000 C11orf70Q9BRQ4 267 aa14.54□□□□□ -0.08
SNRPA1-216ENST00000626000 SELENOOQ9BVL4 669 aa14.54□□□□□ -0.08
SNRPA1-216ENST00000626000 ZNHIT6Q9NWK9 470 aaKnown RBP14.54□□□□□ -0.08
SNRPA1-216ENST00000626000 FBXO10Q9UK96 956 aa14.54□□□□□ -0.08
SNRPA1-216ENST00000626000 SLC8A2Q9UPR5 921 aa14.54□□□□□ -0.08
SNRPA1-216ENST00000626000 STARD13Q9Y3M8 1113 aa14.54□□□□□ -0.08
SNRPA1-216ENST00000626000 PCDHGA2Q9Y5H1 932 aa14.54□□□□□ -0.08
SNRPA1-216ENST00000626000 CACNA1HO95180 2353 aa14.53□□□□□ -0.08
SNRPA1-216ENST00000626000 CCDC163A0A0D9SF12 145 aa14.53□□□□□ -0.08
SNRPA1-216ENST00000626000 KCNU1A8MYU2 1149 aa14.53□□□□□ -0.08
SNRPA1-216ENST00000626000 F5H5T6 163 aa14.53□□□□□ -0.08
SNRPA1-216ENST00000626000 RNF40O75150 1001 aa14.53□□□□□ -0.08
SNRPA1-216ENST00000626000 SERPING1P05155 500 aa14.53□□□□□ -0.08
SNRPA1-216ENST00000626000 MYBL1P10243 752 aa14.53□□□□□ -0.08
SNRPA1-216ENST00000626000 KRT3P12035 628 aa14.53□□□□□ -0.08
SNRPA1-216ENST00000626000 SDC4P31431 198 aa14.53□□□□□ -0.08
SNRPA1-216ENST00000626000 TCF15Q12870 199 aa14.53□□□□□ -0.08
SNRPA1-216ENST00000626000 TDRD12Q587J7 1177 aaKnown RBP14.53□□□□□ -0.08
SNRPA1-216ENST00000626000 EOGTQ5NDL2 527 aa14.53□□□□□ -0.08
SNRPA1-216ENST00000626000 RABGAP1LQ5R372 815 aa14.53□□□□□ -0.08
SNRPA1-216ENST00000626000 SDE2Q6IQ49 451 aa14.53□□□□□ -0.08
SNRPA1-216ENST00000626000 ANKS1BQ7Z6G8 1248 aa14.53□□□□□ -0.08
SNRPA1-216ENST00000626000 PIWIL1Q96J94 861 aaKnown RBP14.53□□□□□ -0.08
SNRPA1-216ENST00000626000 SYT11Q9BT88 431 aa14.53□□□□□ -0.08
SNRPA1-216ENST00000626000 HAUS4Q9H6D7 363 aa14.53□□□□□ -0.08
SNRPA1-216ENST00000626000 RBM12Q9NTZ6 932 aaKnown RBP14.53□□□□□ -0.08
SNRPA1-216ENST00000626000 TMEM59LQ9UK28 342 aa14.53□□□□□ -0.08
SNRPA1-216ENST00000626000 GOLGA8SH3BPF8 625 aa14.52□□□□□ -0.09
SNRPA1-216ENST00000626000 GFRA2O00451 464 aa14.52□□□□□ -0.09
SNRPA1-216ENST00000626000 ZBTB24O43167 697 aaPredicted RBP14.52□□□□□ -0.09
SNRPA1-216ENST00000626000 GRAP2O75791 330 aa14.52□□□□□ -0.09
SNRPA1-216ENST00000626000 CNR2P34972 360 aa14.52□□□□□ -0.09
SNRPA1-216ENST00000626000 RDXP35241 583 aaKnown RBP14.52□□□□□ -0.09
SNRPA1-216ENST00000626000 PTPN9P43378 593 aa14.52□□□□□ -0.09
SNRPA1-216ENST00000626000 CXCR3P49682 368 aa14.52□□□□□ -0.09
SNRPA1-216ENST00000626000 SULT1E1P49888 294 aa14.52□□□□□ -0.09
SNRPA1-216ENST00000626000 RNASE9P60153 205 aaKnown RBP14.52□□□□□ -0.09
SNRPA1-216ENST00000626000 DEUP1Q05D60 604 aa14.52□□□□□ -0.09
SNRPA1-216ENST00000626000 KDSRQ06136 332 aa14.52□□□□□ -0.09
SNRPA1-216ENST00000626000 NME3Q13232 169 aa14.52□□□□□ -0.09
SNRPA1-216ENST00000626000 TAF5Q15542 800 aa14.52□□□□□ -0.09
SNRPA1-216ENST00000626000 ARL13BQ3SXY8 428 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms