RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 LRRC4Q9HBW1 653 aa19.84■□□□□ 0.77
SMN1-211ENST00000625245 NUMA1Q14980 2115 aa19.84■□□□□ 0.77
SMN1-211ENST00000625245 FAM237AA0A1B0GTK4 181 aa19.83■□□□□ 0.77
SMN1-211ENST00000625245 METTL12A8MUP2 240 aa19.83■□□□□ 0.77
SMN1-211ENST00000625245 TULP2O00295 520 aa19.83■□□□□ 0.77
SMN1-211ENST00000625245 CETN3O15182 167 aa19.83■□□□□ 0.77
SMN1-211ENST00000625245 BCAT2O15382 392 aaPredicted RBP19.83■□□□□ 0.77
SMN1-211ENST00000625245 TIMM44O43615 452 aa19.83■□□□□ 0.77
SMN1-211ENST00000625245 FTH1P19P0C7X4 201 aa19.83■□□□□ 0.77
SMN1-211ENST00000625245 HLA-EP13747 358 aa19.83■□□□□ 0.77
SMN1-211ENST00000625245 HARS2P49590 506 aaKnown RBP19.83■□□□□ 0.77
SMN1-211ENST00000625245 COPAP53621 1224 aa19.83■□□□□ 0.77
SMN1-211ENST00000625245 EIF4HQ15056 248 aaKnown RBP19.83■□□□□ 0.77
SMN1-211ENST00000625245 EDRF1Q3B7T1 1238 aa19.83■□□□□ 0.77
SMN1-211ENST00000625245 ZCWPW2Q504Y3 356 aa19.83■□□□□ 0.77
SMN1-211ENST00000625245 MPPE1Q53F39 396 aa19.83■□□□□ 0.77
SMN1-211ENST00000625245 TCERG1LQ5VWI1 586 aa19.83■□□□□ 0.77
SMN1-211ENST00000625245 TMEM215Q68D42 235 aa19.83■□□□□ 0.77
SMN1-211ENST00000625245 IL21RQ9HBE5 538 aa19.83■□□□□ 0.77
SMN1-211ENST00000625245 SFMBT1Q9UHJ3 866 aa19.83■□□□□ 0.77
SMN1-211ENST00000625245 EIF2B4Q9UI10 523 aaKnown RBP19.83■□□□□ 0.77
SMN1-211ENST00000625245 KNL1Q8NG31 2342 aa19.83■□□□□ 0.76
SMN1-211ENST00000625245 ZZEF1O43149 2961 aa19.82■□□□□ 0.76
SMN1-211ENST00000625245 FAM221BA6H8Z2 402 aa19.82■□□□□ 0.76
SMN1-211ENST00000625245 CD19P15391 556 aa19.82■□□□□ 0.76
SMN1-211ENST00000625245 PDE4CQ08493 712 aa19.82■□□□□ 0.76
SMN1-211ENST00000625245 DCAF17Q5H9S7 520 aaPredicted RBP19.82■□□□□ 0.76
SMN1-211ENST00000625245 PM20D1Q6GTS8 502 aa19.82■□□□□ 0.76
SMN1-211ENST00000625245 RNF139Q8WU17 664 aa19.82■□□□□ 0.76
SMN1-211ENST00000625245 SNX19Q92543 992 aa19.82■□□□□ 0.76
SMN1-211ENST00000625245 EDEM1Q92611 657 aa19.82■□□□□ 0.76
SMN1-211ENST00000625245 IPO9Q96P70 1041 aaKnown RBP19.82■□□□□ 0.76
SMN1-211ENST00000625245 GOLPH3LQ9H4A5 285 aa19.82■□□□□ 0.76
SMN1-211ENST00000625245 GAREM1Q9H706 876 aa19.82■□□□□ 0.76
SMN1-211ENST00000625245 OLA1Q9NTK5 396 aaKnown RBP19.82■□□□□ 0.76
SMN1-211ENST00000625245 HESX1Q9UBX0 185 aa19.82■□□□□ 0.76
SMN1-211ENST00000625245 TSPAN16Q9UKR8 245 aa19.82■□□□□ 0.76
SMN1-211ENST00000625245 NFE2L3Q9Y4A8 694 aa19.82■□□□□ 0.76
SMN1-211ENST00000625245 ZNF202O95125 648 aa19.81■□□□□ 0.76
SMN1-211ENST00000625245 BCAT1P54687 386 aa19.81■□□□□ 0.76
SMN1-211ENST00000625245 ADIGQ0VDE8 80 aa19.81■□□□□ 0.76
SMN1-211ENST00000625245 TRIP4Q15650 581 aaPredicted RBP19.81■□□□□ 0.76
SMN1-211ENST00000625245 FNDC3BQ53EP0 1204 aaKnown RBP19.81■□□□□ 0.76
SMN1-211ENST00000625245 SGO2Q562F6 1265 aa19.81■□□□□ 0.76
SMN1-211ENST00000625245 FAM217AQ8IXS0 508 aa19.81■□□□□ 0.76
SMN1-211ENST00000625245 ZNF366Q8N895 744 aa19.81■□□□□ 0.76
SMN1-211ENST00000625245 RBBP8NLQ8NC74 664 aaPredicted RBP19.81■□□□□ 0.76
SMN1-211ENST00000625245 OR2T3Q8NH03 318 aa19.81■□□□□ 0.76
SMN1-211ENST00000625245 UBA3Q8TBC4 463 aa19.81■□□□□ 0.76
SMN1-211ENST00000625245 CYB5D2Q8WUJ1 264 aa19.81■□□□□ 0.76
SMN1-211ENST00000625245 ADAMTS14Q8WXS8 1223 aa19.81■□□□□ 0.76
SMN1-211ENST00000625245 TMA16Q96EY4 203 aaKnown RBP19.81■□□□□ 0.76
SMN1-211ENST00000625245 PLA2G4CQ9UP65 541 aa19.81■□□□□ 0.76
SMN1-211ENST00000625245 LHX6Q9UPM6 363 aa19.81■□□□□ 0.76
SMN1-211ENST00000625245 APOBEC2Q9Y235 224 aaKnown RBP19.81■□□□□ 0.76
SMN1-211ENST00000625245 ZDHHC9Q9Y397 364 aa19.81■□□□□ 0.76
SMN1-211ENST00000625245 PKD1L2Q7Z442 2459 aa19.81■□□□□ 0.76
SMN1-211ENST00000625245 ZFYVE26Q68DK2 2539 aa19.8■□□□□ 0.76
SMN1-211ENST00000625245 XPO1O14980 1071 aaKnown RBP19.8■□□□□ 0.76
SMN1-211ENST00000625245 CER1O95813 267 aa19.8■□□□□ 0.76
SMN1-211ENST00000625245 HOXD9P28356 352 aaPredicted RBP19.8■□□□□ 0.76
SMN1-211ENST00000625245 MATKP42679 507 aa19.8■□□□□ 0.76
SMN1-211ENST00000625245 MCCD1P59942 119 aaPredicted RBP19.8■□□□□ 0.76
SMN1-211ENST00000625245 RING1Q06587 406 aa19.8■□□□□ 0.76
SMN1-211ENST00000625245 SCAPQ12770 1279 aa19.8■□□□□ 0.76
SMN1-211ENST00000625245 HLA-BQ31612 363 aa19.8■□□□□ 0.76
SMN1-211ENST00000625245 CBWD6Q4V339 395 aa19.8■□□□□ 0.76
SMN1-211ENST00000625245 CBWD3Q5JTY5 395 aa19.8■□□□□ 0.76
SMN1-211ENST00000625245 CBWD5Q5RIA9 395 aa19.8■□□□□ 0.76
SMN1-211ENST00000625245 BSPRYQ5W0U4 402 aa19.8■□□□□ 0.76
SMN1-211ENST00000625245 CHST9Q7L1S5 443 aa19.8■□□□□ 0.76
SMN1-211ENST00000625245 BHLHA9Q7RTU4 235 aa19.8■□□□□ 0.76
SMN1-211ENST00000625245 SIX6OS1Q8N1H7 587 aa19.8■□□□□ 0.76
SMN1-211ENST00000625245 LHX5Q9H2C1 402 aa19.8■□□□□ 0.76
SMN1-211ENST00000625245 HBS1LQ9Y450 684 aaKnown RBP19.8■□□□□ 0.76
SMN1-211ENST00000625245 CABIN1Q9Y6J0 2220 aa19.79■□□□□ 0.76
SMN1-211ENST00000625245 PLXNB3Q9ULL4 1909 aa19.79■□□□□ 0.76
SMN1-211ENST00000625245 A0A1B0GVT2 93 aa19.79■□□□□ 0.76
SMN1-211ENST00000625245 A0A1W2PQ27 194 aa19.79■□□□□ 0.76
SMN1-211ENST00000625245 A0A1W2PQ64 194 aa19.79■□□□□ 0.76
SMN1-211ENST00000625245 TAF4O00268 1085 aa19.79■□□□□ 0.76
SMN1-211ENST00000625245 IGLV3-19P01714 112 aa19.79■□□□□ 0.76
SMN1-211ENST00000625245 HOXB3P14651 431 aaPredicted RBP19.79■□□□□ 0.76
SMN1-211ENST00000625245 HLA-FP30511 346 aa19.79■□□□□ 0.76
SMN1-211ENST00000625245 BNC1Q01954 994 aa19.79■□□□□ 0.76
SMN1-211ENST00000625245 BST2Q10589 180 aaKnown RBP19.79■□□□□ 0.76
SMN1-211ENST00000625245 LRMPQ12912 555 aa19.79■□□□□ 0.76
SMN1-211ENST00000625245 CUL2Q13617 745 aa19.79■□□□□ 0.76
SMN1-211ENST00000625245 IL27RAQ6UWB1 636 aa19.79■□□□□ 0.76
SMN1-211ENST00000625245 SLCO6A1Q86UG4 719 aa19.79■□□□□ 0.76
SMN1-211ENST00000625245 WFIKKN2Q8TEU8 576 aa19.79■□□□□ 0.76
SMN1-211ENST00000625245 CCDC34Q96HJ3 373 aa19.79■□□□□ 0.76
SMN1-211ENST00000625245 SCAND2PQ9GZW5 306 aaPredicted RBP19.79■□□□□ 0.76
SMN1-211ENST00000625245 C6orf106Q9H6K1 298 aaPredicted RBP19.79■□□□□ 0.76
SMN1-211ENST00000625245 TM7SF3Q9NS93 570 aa19.79■□□□□ 0.76
SMN1-211ENST00000625245 ABCB8Q9NUT2 735 aa19.79■□□□□ 0.76
SMN1-211ENST00000625245 PCOLCE2Q9UKZ9 415 aa19.79■□□□□ 0.76
SMN1-211ENST00000625245 FNDC3AQ9Y2H6 1198 aaKnown RBP19.79■□□□□ 0.76
SMN1-211ENST00000625245 YJEFN3A6XGL0 299 aa19.78■□□□□ 0.76
SMN1-211ENST00000625245 E7ENQ6 273 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms