RNA–Protein interactions for RNA: ENST00000622972.3

LINC00963-215, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 444 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-215ENST00000622972 NLRC4Q9NPP4 1024 aa6.18□□□□□ -1.42
LINC00963-215ENST00000622972 PLCB1Q9NQ66 1216 aa6.18□□□□□ -1.42
LINC00963-215ENST00000622972 FAM207AQ9NSI2 230 aaPredicted RBP6.18□□□□□ -1.42
LINC00963-215ENST00000622972 CFAP97Q9P2B7 532 aa6.18□□□□□ -1.42
LINC00963-215ENST00000622972 NOCTQ9UK39 431 aaKnown RBP6.18□□□□□ -1.42
LINC00963-215ENST00000622972 DNAJC12Q9UKB3 198 aa6.18□□□□□ -1.42
LINC00963-215ENST00000622972 ARHGAP26Q9UNA1 814 aa6.18□□□□□ -1.42
LINC00963-215ENST00000622972 SH3BP1Q9Y3L3 701 aa6.18□□□□□ -1.42
LINC00963-215ENST00000622972 CPQQ9Y646 472 aa6.18□□□□□ -1.42
LINC00963-215ENST00000622972 CCDC163A0A0D9SF12 145 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 ZNF840PA6NDX5 716 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 SMTNL1A8MU46 457 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 CDK2AP1O14519 115 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 CYP26A1O43174 497 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 RHOBTB1O94844 696 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 DKK1O94907 266 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 RTN3O95197 1032 aaPredicted RBP6.17□□□□□ -1.42
LINC00963-215ENST00000622972 FGFR1OPO95684 399 aaKnown RBP6.17□□□□□ -1.42
LINC00963-215ENST00000622972 APBB3O95704 486 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 APODP05090 189 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 IRF1P10914 325 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 PFKLP17858 780 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 ADORA2BP29275 332 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 HOXA6P31267 233 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 CREB5Q02930 508 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 UBXN1Q04323 297 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 TBX2Q13207 712 aaPredicted RBP6.17□□□□□ -1.42
LINC00963-215ENST00000622972 DRAP1Q14919 205 aaPredicted RBP6.17□□□□□ -1.42
LINC00963-215ENST00000622972 SF3A2Q15428 464 aaKnown RBP6.17□□□□□ -1.42
LINC00963-215ENST00000622972 USP39Q53GS9 565 aaKnown RBP6.17□□□□□ -1.42
LINC00963-215ENST00000622972 PPM1JQ5JR12 505 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 BTBD8Q5XKL5 378 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 ARHGAP17Q68EM7 881 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 DENND1BQ6P3S1 775 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 SARM1Q6SZW1 724 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 TMEM270Q6UE05 265 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 NOP9Q86U38 636 aaKnown RBP6.17□□□□□ -1.42
LINC00963-215ENST00000622972 KBTBD6Q86V97 674 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 SLC47A2Q86VL8 602 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 UNC93AQ86WB7 457 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 DDX42Q86XP3 938 aaKnown RBP eCLIP6.17□□□□□ -1.42
LINC00963-215ENST00000622972 DNAAF5Q86Y56 855 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 NUP93Q8N1F7 819 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 PGBD3Q8N328 593 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 CCDC33Q8N5R6 958 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 TSEN2Q8NCE0 465 aaKnown RBP6.17□□□□□ -1.42
LINC00963-215ENST00000622972 PDZD8Q8NEN9 1154 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 NDRG1Q92597 394 aaKnown RBP6.17□□□□□ -1.42
LINC00963-215ENST00000622972 JAKMIP2Q96AA8 810 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 PIWIL1Q96J94 861 aaKnown RBP6.17□□□□□ -1.42
LINC00963-215ENST00000622972 TNIP3Q96KP6 325 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 C8orf48Q96LL4 319 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 CEP295NLQ96MC4 621 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 PCDHB18PQ96TA0 734 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 TPSD1Q9BZJ3 242 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 IMPG2Q9BZV3 1241 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 DNAI2Q9GZS0 605 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 NAT10Q9H0A0 1025 aaKnown RBP6.17□□□□□ -1.42
LINC00963-215ENST00000622972 CSNK1G1Q9HCP0 422 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 DMAP1Q9NPF5 467 aaPredicted RBP6.17□□□□□ -1.42
LINC00963-215ENST00000622972 KRT82Q9NSB4 513 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 POLR3BQ9NW08 1133 aaPredicted RBP6.17□□□□□ -1.42
LINC00963-215ENST00000622972 OSER1Q9NX31 292 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 BCCIPQ9P287 314 aaKnown RBP eCLIP6.17□□□□□ -1.42
LINC00963-215ENST00000622972 CHORDC1Q9UHD1 332 aaPredicted RBP6.17□□□□□ -1.42
LINC00963-215ENST00000622972 DNMT3LQ9UJW3 386 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 INVSQ9Y283 1065 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 HRH3Q9Y5N1 445 aa6.17□□□□□ -1.42
LINC00963-215ENST00000622972 NYNRINQ9P2P1 1898 aaKnown RBP6.17□□□□□ -1.42
LINC00963-215ENST00000622972 EP300Q09472 2414 aaPredicted RBP6.17□□□□□ -1.42
LINC00963-215ENST00000622972 A0A1W2PQC6 194 aa6.16□□□□□ -1.42
LINC00963-215ENST00000622972 LRRC53A6NM62 1247 aa6.16□□□□□ -1.42
LINC00963-215ENST00000622972 SLC30A4O14863 429 aa6.16□□□□□ -1.42
LINC00963-215ENST00000622972 DCLK1O15075 740 aa6.16□□□□□ -1.42
LINC00963-215ENST00000622972 ALDH1A2O94788 518 aa6.16□□□□□ -1.42
LINC00963-215ENST00000622972 CYP17A1P05093 508 aa6.16□□□□□ -1.42
LINC00963-215ENST00000622972 PLEKP08567 350 aaPredicted RBP6.16□□□□□ -1.42
LINC00963-215ENST00000622972 FAM163BP0C2L3 166 aa6.16□□□□□ -1.42
LINC00963-215ENST00000622972 ADH5P11766 374 aa6.16□□□□□ -1.42
LINC00963-215ENST00000622972 SNRPBP14678 240 aaKnown RBP6.16□□□□□ -1.42
LINC00963-215ENST00000622972 TGM1P22735 817 aa6.16□□□□□ -1.42
LINC00963-215ENST00000622972 MPLP40238 635 aa6.16□□□□□ -1.42
LINC00963-215ENST00000622972 ZNF75DP51815 510 aa6.16□□□□□ -1.42
LINC00963-215ENST00000622972 POLR2FP61218 127 aaKnown RBP6.16□□□□□ -1.42
LINC00963-215ENST00000622972 SLC7A9P82251 487 aa6.16□□□□□ -1.42
LINC00963-215ENST00000622972 ZXDBP98169 803 aa6.16□□□□□ -1.42
LINC00963-215ENST00000622972 KDSRQ06136 332 aa6.16□□□□□ -1.42
LINC00963-215ENST00000622972 PDE4CQ08493 712 aa6.16□□□□□ -1.42
LINC00963-215ENST00000622972 POU4F2Q12837 409 aa6.16□□□□□ -1.42
LINC00963-215ENST00000622972 DHCR24Q15392 516 aa6.16□□□□□ -1.42
LINC00963-215ENST00000622972 GOLGA7BQ2TAP0 167 aa6.16□□□□□ -1.42
LINC00963-215ENST00000622972 ANO4Q32M45 955 aa6.16□□□□□ -1.42
LINC00963-215ENST00000622972 HECTD3Q5T447 861 aa6.16□□□□□ -1.42
LINC00963-215ENST00000622972 HGSNATQ68CP4 663 aa6.16□□□□□ -1.42
LINC00963-215ENST00000622972 ANO7Q6IWH7 933 aa6.16□□□□□ -1.42
LINC00963-215ENST00000622972 WDR59Q6PJI9 974 aa6.16□□□□□ -1.42
LINC00963-215ENST00000622972 SYT13Q7L8C5 426 aa6.16□□□□□ -1.42
LINC00963-215ENST00000622972 IRF2BP2Q7Z5L9 587 aa6.16□□□□□ -1.42
LINC00963-215ENST00000622972 VSTM4Q8IW00 320 aa6.16□□□□□ -1.42
LINC00963-215ENST00000622972 CCDC150Q8NCX0 1101 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms