RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 ADGRF1Q5T601 910 aa19.3■□□□□ 0.68
CIRBP-245ENST00000621399 C1orf228Q6PIY5 440 aa19.3■□□□□ 0.68
CIRBP-245ENST00000621399 TPGS1Q6ZTW0 290 aa19.3■□□□□ 0.68
CIRBP-245ENST00000621399 FAM3CQ92520 227 aa19.3■□□□□ 0.68
CIRBP-245ENST00000621399 AZIN2Q96A70 460 aa19.3■□□□□ 0.68
CIRBP-245ENST00000621399 PGAP3Q96FM1 320 aaPredicted RBP19.3■□□□□ 0.68
CIRBP-245ENST00000621399 ADAM33Q9BZ11 813 aa19.3■□□□□ 0.68
CIRBP-245ENST00000621399 THAP2Q9H0W7 228 aa19.3■□□□□ 0.68
CIRBP-245ENST00000621399 TBC1D17Q9HA65 648 aa19.3■□□□□ 0.68
CIRBP-245ENST00000621399 MRPL47Q9HD33 250 aaKnown RBP19.3■□□□□ 0.68
CIRBP-245ENST00000621399 PIGVQ9NUD9 493 aa19.3■□□□□ 0.68
CIRBP-245ENST00000621399 SPTLC3Q9NUV7 552 aa19.3■□□□□ 0.68
CIRBP-245ENST00000621399 TMEM51Q9NW97 253 aa19.3■□□□□ 0.68
CIRBP-245ENST00000621399 STOML2Q9UJZ1 356 aa19.3■□□□□ 0.68
CIRBP-245ENST00000621399 NENFQ9UMX5 172 aa19.3■□□□□ 0.68
CIRBP-245ENST00000621399 PAXBP1Q9Y5B6 917 aa19.3■□□□□ 0.68
CIRBP-245ENST00000621399 SCINQ9Y6U3 715 aa19.3■□□□□ 0.68
CIRBP-245ENST00000621399 KANSL1LA0AUZ9 987 aa19.29■□□□□ 0.68
CIRBP-245ENST00000621399 RDXP35241 583 aaKnown RBP19.29■□□□□ 0.68
CIRBP-245ENST00000621399 PTPN9P43378 593 aa19.29■□□□□ 0.68
CIRBP-245ENST00000621399 PPP2R5DQ14738 602 aa19.29■□□□□ 0.68
CIRBP-245ENST00000621399 CDO1Q16878 200 aa19.29■□□□□ 0.68
CIRBP-245ENST00000621399 C15orf59Q2T9L4 293 aaPredicted RBP19.29■□□□□ 0.68
CIRBP-245ENST00000621399 TXNDC11Q6PKC3 985 aa19.29■□□□□ 0.68
CIRBP-245ENST00000621399 FAM217AQ8IXS0 508 aa19.29■□□□□ 0.68
CIRBP-245ENST00000621399 CPXM2Q8N436 756 aa19.29■□□□□ 0.68
CIRBP-245ENST00000621399 ATP6V0D2Q8N8Y2 350 aa19.29■□□□□ 0.68
CIRBP-245ENST00000621399 BTN2A3PQ96KV6 586 aa19.29■□□□□ 0.68
CIRBP-245ENST00000621399 DDX50Q9BQ39 737 aaKnown RBP19.29■□□□□ 0.68
CIRBP-245ENST00000621399 BBS2Q9BXC9 721 aa19.29■□□□□ 0.68
CIRBP-245ENST00000621399 C1QTNF1Q9BXJ1 281 aa19.29■□□□□ 0.68
CIRBP-245ENST00000621399 WDCPQ9H6R7 721 aa19.29■□□□□ 0.68
CIRBP-245ENST00000621399 MRPS17Q9Y2R5 130 aaKnown RBP19.29■□□□□ 0.68
CIRBP-245ENST00000621399 GOLGA6L7A0A1B0GV03 622 aa19.28■□□□□ 0.68
CIRBP-245ENST00000621399 SHISA7A6NL88 538 aa19.28■□□□□ 0.68
CIRBP-245ENST00000621399 KCNU1A8MYU2 1149 aa19.28■□□□□ 0.68
CIRBP-245ENST00000621399 NEDD8-MDP1E9PL57 170 aa19.28■□□□□ 0.68
CIRBP-245ENST00000621399 TRDMT1O14717 391 aaKnown RBP19.28■□□□□ 0.68
CIRBP-245ENST00000621399 TSPAN3O60637 253 aa19.28■□□□□ 0.68
CIRBP-245ENST00000621399 CYBBP04839 570 aa19.28■□□□□ 0.68
CIRBP-245ENST00000621399 CXCR3P49682 368 aa19.28■□□□□ 0.68
CIRBP-245ENST00000621399 ZNF143P52747 638 aaPredicted RBP19.28■□□□□ 0.68
CIRBP-245ENST00000621399 GALCP54803 685 aa19.28■□□□□ 0.68
CIRBP-245ENST00000621399 UBXN2BQ14CS0 331 aa19.28■□□□□ 0.68
CIRBP-245ENST00000621399 BRMS1LQ5PSV4 323 aa19.28■□□□□ 0.68
CIRBP-245ENST00000621399 BHMTQ93088 406 aa19.28■□□□□ 0.68
CIRBP-245ENST00000621399 EXOC4Q96A65 974 aa19.28■□□□□ 0.68
CIRBP-245ENST00000621399 NELL2Q99435 816 aa19.28■□□□□ 0.68
CIRBP-245ENST00000621399 C11orf16Q9NQ32 467 aa19.28■□□□□ 0.68
CIRBP-245ENST00000621399 MARK1Q9P0L2 795 aa19.28■□□□□ 0.68
CIRBP-245ENST00000621399 XPO7Q9UIA9 1087 aaKnown RBP19.28■□□□□ 0.68
CIRBP-245ENST00000621399 NDRG2Q9UN36 371 aaKnown RBP19.28■□□□□ 0.68
CIRBP-245ENST00000621399 KIF26AQ9ULI4 1882 aaPredicted RBP19.28■□□□□ 0.68
CIRBP-245ENST00000621399 TMEM191CA6NGB0 347 aa19.27■□□□□ 0.68
CIRBP-245ENST00000621399 FAM170BA6NMN3 283 aa19.27■□□□□ 0.68
CIRBP-245ENST00000621399 HOXC11O43248 304 aaPredicted RBP19.27■□□□□ 0.68
CIRBP-245ENST00000621399 GPR37L1O60883 481 aa19.27■□□□□ 0.68
CIRBP-245ENST00000621399 ENDOD1O94919 500 aa19.27■□□□□ 0.68
CIRBP-245ENST00000621399 H2AFZP0C0S5 128 aa19.27■□□□□ 0.68
CIRBP-245ENST00000621399 TYRP14679 529 aa19.27■□□□□ 0.68
CIRBP-245ENST00000621399 DESP17661 470 aa19.27■□□□□ 0.68
CIRBP-245ENST00000621399 GALK1P51570 392 aa19.27■□□□□ 0.68
CIRBP-245ENST00000621399 ATXN1P54253 815 aaKnown RBP19.27■□□□□ 0.68
CIRBP-245ENST00000621399 MTA1Q13330 715 aa19.27■□□□□ 0.68
CIRBP-245ENST00000621399 PON2Q15165 354 aa19.27■□□□□ 0.68
CIRBP-245ENST00000621399 GAB4Q2WGN9 574 aa19.27■□□□□ 0.68
CIRBP-245ENST00000621399 FAM133BQ5BKY9 247 aaKnown RBP19.27■□□□□ 0.68
CIRBP-245ENST00000621399 TMEM31Q5JXX7 168 aa19.27■□□□□ 0.68
CIRBP-245ENST00000621399 SH3PXD2AQ5TCZ1 1133 aa19.27■□□□□ 0.68
CIRBP-245ENST00000621399 NADSYN1Q6IA69 706 aa19.27■□□□□ 0.68
CIRBP-245ENST00000621399 H2AFVQ71UI9 128 aa19.27■□□□□ 0.68
CIRBP-245ENST00000621399 STRADAQ7RTN6 431 aa19.27■□□□□ 0.68
CIRBP-245ENST00000621399 BNIPLQ7Z465 357 aa19.27■□□□□ 0.68
CIRBP-245ENST00000621399 BMP8AQ7Z5Y6 402 aa19.27■□□□□ 0.68
CIRBP-245ENST00000621399 TMTC1Q8IUR5 882 aa19.27■□□□□ 0.68
CIRBP-245ENST00000621399 CCDC170Q8IYT3 715 aa19.27■□□□□ 0.68
CIRBP-245ENST00000621399 NAT16Q8N8M0 369 aa19.27■□□□□ 0.68
CIRBP-245ENST00000621399 DDI1Q8WTU0 396 aa19.27■□□□□ 0.68
CIRBP-245ENST00000621399 FAM172AQ8WUF8 416 aa19.27■□□□□ 0.68
CIRBP-245ENST00000621399 CTNNBL1Q8WYA6 563 aaPredicted RBP19.27■□□□□ 0.68
CIRBP-245ENST00000621399 CHFRQ96EP1 664 aa19.27■□□□□ 0.68
CIRBP-245ENST00000621399 P2RY13Q9BPV8 354 aa19.27■□□□□ 0.68
CIRBP-245ENST00000621399 CNPY3Q9BT09 278 aa19.27■□□□□ 0.68
CIRBP-245ENST00000621399 FOXQ1Q9C009 403 aa19.27■□□□□ 0.68
CIRBP-245ENST00000621399 TKTL2Q9H0I9 626 aa19.27■□□□□ 0.68
CIRBP-245ENST00000621399 LTB4R2Q9NPC1 389 aa19.27■□□□□ 0.68
CIRBP-245ENST00000621399 TICRRQ7Z2Z1 1910 aa19.26■□□□□ 0.67
CIRBP-245ENST00000621399 CCP110O43303 1012 aa19.26■□□□□ 0.67
CIRBP-245ENST00000621399 CYP1A2P05177 515 aa19.26■□□□□ 0.67
CIRBP-245ENST00000621399 PSMA2P25787 234 aa19.26■□□□□ 0.67
CIRBP-245ENST00000621399 SLC6A11P48066 632 aa19.26■□□□□ 0.67
CIRBP-245ENST00000621399 MPPE1Q53F39 396 aa19.26■□□□□ 0.67
CIRBP-245ENST00000621399 RAP1GAP2Q684P5 730 aa19.26■□□□□ 0.67
CIRBP-245ENST00000621399 NAIF1Q69YI7 327 aaPredicted RBP19.26■□□□□ 0.67
CIRBP-245ENST00000621399 RFWD3Q6PCD5 774 aa19.26■□□□□ 0.67
CIRBP-245ENST00000621399 FAM131BQ86XD5 332 aa19.26■□□□□ 0.67
CIRBP-245ENST00000621399 CENPIQ92674 756 aaPredicted RBP19.26■□□□□ 0.67
CIRBP-245ENST00000621399 CD101Q93033 1021 aa19.26■□□□□ 0.67
CIRBP-245ENST00000621399 ARHGEF26Q96DR7 871 aa19.26■□□□□ 0.67
CIRBP-245ENST00000621399 TMA16Q96EY4 203 aaKnown RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms