RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 TKTL2Q9H0I9 626 aa10.27□□□□□ -0.76
VTA1-205ENST00000620996 ARHGEF4Q9NR80 690 aa10.27□□□□□ -0.76
VTA1-205ENST00000620996 TMEM161AQ9NX61 479 aa10.27□□□□□ -0.76
VTA1-205ENST00000620996 KANSL3Q9P2N6 904 aa10.27□□□□□ -0.76
VTA1-205ENST00000620996 FAM72CH0Y354 149 aa10.27□□□□□ -0.77
VTA1-205ENST00000620996 DNM1LO00429 736 aa10.27□□□□□ -0.77
VTA1-205ENST00000620996 ENPP3O14638 875 aa10.27□□□□□ -0.77
VTA1-205ENST00000620996 AGTP01019 485 aa10.27□□□□□ -0.77
VTA1-205ENST00000620996 KRT15P19012 456 aa10.27□□□□□ -0.77
VTA1-205ENST00000620996 SKOR1P84550 965 aa10.27□□□□□ -0.77
VTA1-205ENST00000620996 MSS51Q4VC12 460 aa10.27□□□□□ -0.77
VTA1-205ENST00000620996 SPOUT1Q5T280 376 aaKnown RBP10.27□□□□□ -0.77
VTA1-205ENST00000620996 FAM72AQ5TYM5 149 aa10.27□□□□□ -0.77
VTA1-205ENST00000620996 FAM72DQ6L9T8 149 aa10.27□□□□□ -0.77
VTA1-205ENST00000620996 TAOK1Q7L7X3 1001 aa10.27□□□□□ -0.77
VTA1-205ENST00000620996 TAC4Q86UU9 113 aa10.27□□□□□ -0.77
VTA1-205ENST00000620996 FAM72BQ86X60 149 aa10.27□□□□□ -0.77
VTA1-205ENST00000620996 SUGP1Q8IWZ8 645 aaKnown RBP10.27□□□□□ -0.77
VTA1-205ENST00000620996 FAM126BQ8IXS8 530 aa10.27□□□□□ -0.77
VTA1-205ENST00000620996 COLGALT2Q8IYK4 626 aa10.27□□□□□ -0.77
VTA1-205ENST00000620996 TFB1MQ8WVM0 346 aaKnown RBP10.27□□□□□ -0.77
VTA1-205ENST00000620996 SLC2A13Q96QE2 648 aa10.27□□□□□ -0.77
VTA1-205ENST00000620996 SEPT5Q99719 369 aaPredicted RBP10.27□□□□□ -0.77
VTA1-205ENST00000620996 PAIP2Q9BPZ3 127 aaKnown RBP10.27□□□□□ -0.77
VTA1-205ENST00000620996 HIPK3Q9H422 1215 aa10.27□□□□□ -0.77
VTA1-205ENST00000620996 DTLQ9NZJ0 730 aa10.27□□□□□ -0.77
VTA1-205ENST00000620996 SFMBT1Q9UHJ3 866 aa10.27□□□□□ -0.77
VTA1-205ENST00000620996 G3BP2Q9UN86 482 aaKnown RBP10.27□□□□□ -0.77
VTA1-205ENST00000620996 MSI1O43347 362 aaKnown RBP10.27□□□□□ -0.77
VTA1-205ENST00000620996 CYP11A1P05108 521 aa10.27□□□□□ -0.77
VTA1-205ENST00000620996 CCL5P13501 91 aa10.27□□□□□ -0.77
VTA1-205ENST00000620996 CHN1P15882 459 aa10.27□□□□□ -0.77
VTA1-205ENST00000620996 CYP2C18P33260 490 aa10.27□□□□□ -0.77
VTA1-205ENST00000620996 ADRA1BP35368 520 aa10.27□□□□□ -0.77
VTA1-205ENST00000620996 CCT5P48643 541 aa10.27□□□□□ -0.77
VTA1-205ENST00000620996 LRRC14Q15048 493 aa10.27□□□□□ -0.77
VTA1-205ENST00000620996 SMAD1Q15797 465 aaKnown RBP10.27□□□□□ -0.77
VTA1-205ENST00000620996 VARS2Q5ST30 1063 aaKnown RBP10.27□□□□□ -0.77
VTA1-205ENST00000620996 SWT1Q5T5J6 900 aaKnown RBP10.27□□□□□ -0.77
VTA1-205ENST00000620996 FAM171BQ6P995 826 aa10.27□□□□□ -0.77
VTA1-205ENST00000620996 RFX8Q6ZV50 586 aa10.27□□□□□ -0.77
VTA1-205ENST00000620996 DCP1BQ8IZD4 617 aaKnown RBP10.27□□□□□ -0.77
VTA1-205ENST00000620996 PGM2Q96G03 612 aa10.27□□□□□ -0.77
VTA1-205ENST00000620996 TTC25Q96NG3 672 aa10.27□□□□□ -0.77
VTA1-205ENST00000620996 FOXP3Q9BZS1 431 aa10.27□□□□□ -0.77
VTA1-205ENST00000620996 PIH1D1Q9NWS0 290 aaKnown RBP10.27□□□□□ -0.77
VTA1-205ENST00000620996 SLC27A5Q9Y2P5 690 aa10.27□□□□□ -0.77
VTA1-205ENST00000620996 MAD1L1Q9Y6D9 718 aa10.27□□□□□ -0.77
VTA1-205ENST00000620996 TDRD15B5MCY1 1934 aaKnown RBP10.26□□□□□ -0.77
VTA1-205ENST00000620996 CFAP69A5D8W1 941 aa10.26□□□□□ -0.77
VTA1-205ENST00000620996 HHLA1C9JL84 531 aa10.26□□□□□ -0.77
VTA1-205ENST00000620996 ATP5DP30049 168 aa10.26□□□□□ -0.77
VTA1-205ENST00000620996 EFTUD2Q15029 972 aaKnown RBP eCLIP10.26□□□□□ -0.77
VTA1-205ENST00000620996 SLC45A4Q5BKX6 768 aa10.26□□□□□ -0.77
VTA1-205ENST00000620996 ARCQ7LC44 396 aa10.26□□□□□ -0.77
VTA1-205ENST00000620996 VPS52Q8N1B4 723 aa10.26□□□□□ -0.77
VTA1-205ENST00000620996 NAT8LQ8N9F0 302 aa10.26□□□□□ -0.77
VTA1-205ENST00000620996 ATAD1Q8NBU5 361 aa10.26□□□□□ -0.77
VTA1-205ENST00000620996 DEPDC1BQ8WUY9 529 aa10.26□□□□□ -0.77
VTA1-205ENST00000620996 FERMT1Q9BQL6 677 aa10.26□□□□□ -0.77
VTA1-205ENST00000620996 ROPN1BQ9BZX4 212 aaPredicted RBP10.26□□□□□ -0.77
VTA1-205ENST00000620996 ROPN1Q9HAT0 212 aaPredicted RBP10.26□□□□□ -0.77
VTA1-205ENST00000620996 ETNK1Q9HBU6 452 aa10.26□□□□□ -0.77
VTA1-205ENST00000620996 CPSF2Q9P2I0 782 aaKnown RBP10.26□□□□□ -0.77
VTA1-205ENST00000620996 ATP11BQ9Y2G3 1177 aa10.26□□□□□ -0.77
VTA1-205ENST00000620996 FARP1Q9Y4F1 1045 aaPredicted RBP10.26□□□□□ -0.77
VTA1-205ENST00000620996 TTLL3Q9Y4R7 772 aa10.26□□□□□ -0.77
VTA1-205ENST00000620996 C2CD2LO14523 706 aa10.26□□□□□ -0.77
VTA1-205ENST00000620996 STK10O94804 968 aaKnown RBP10.26□□□□□ -0.77
VTA1-205ENST00000620996 ALDH2P05091 517 aa10.26□□□□□ -0.77
VTA1-205ENST00000620996 TYMPP19971 482 aa10.26□□□□□ -0.77
VTA1-205ENST00000620996 EPHB2P29323 1055 aa10.26□□□□□ -0.77
VTA1-205ENST00000620996 PHBP35232 272 aa10.26□□□□□ -0.77
VTA1-205ENST00000620996 PRMT2P55345 433 aa10.26□□□□□ -0.77
VTA1-205ENST00000620996 STAT4Q14765 748 aa10.26□□□□□ -0.77
VTA1-205ENST00000620996 MGAT5BQ3V5L5 792 aa10.26□□□□□ -0.77
VTA1-205ENST00000620996 CASC4Q6P4E1 433 aa10.26□□□□□ -0.77
VTA1-205ENST00000620996 C3orf62Q6ZUJ4 267 aa10.26□□□□□ -0.77
VTA1-205ENST00000620996 TP53INP2Q8IXH6 220 aa10.26□□□□□ -0.77
VTA1-205ENST00000620996 SLC43A3Q8NBI5 491 aa10.26□□□□□ -0.77
VTA1-205ENST00000620996 TLCD1Q96CP7 247 aa10.26□□□□□ -0.77
VTA1-205ENST00000620996 COLEC11Q9BWP8 271 aa10.26□□□□□ -0.77
VTA1-205ENST00000620996 USP29Q9HBJ7 922 aa10.26□□□□□ -0.77
VTA1-205ENST00000620996 ANLNQ9NQW6 1124 aa10.26□□□□□ -0.77
VTA1-205ENST00000620996 ADAM28Q9UKQ2 775 aa10.26□□□□□ -0.77
VTA1-205ENST00000620996 KCNK1O00180 336 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 CREB1P16220 341 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 ATP2A2P16615 1042 aaKnown RBP10.25□□□□□ -0.77
VTA1-205ENST00000620996 ELK3P41970 407 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 RAB41Q5JT25 222 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 CYP4X1Q8N118 509 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 ATP11CQ8NB49 1132 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 DQX1Q8TE96 717 aaKnown RBP10.25□□□□□ -0.77
VTA1-205ENST00000620996 HTR3CQ8WXA8 447 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 CELF6Q96J87 481 aaKnown RBP10.25□□□□□ -0.77
VTA1-205ENST00000620996 SERPINB12Q96P63 405 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 CD248Q9HCU0 757 aa10.25□□□□□ -0.77
VTA1-205ENST00000620996 INTS9Q9NV88 658 aaKnown RBP10.25□□□□□ -0.77
VTA1-205ENST00000620996 MAGED2Q9UNF1 606 aaPredicted RBP10.25□□□□□ -0.77
VTA1-205ENST00000620996 SHOX2O60902 331 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms