RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 TULP3O75386 442 aa18.99■□□□□ 0.63
LITAF-220ENST00000620789 MOCS2O96007 188 aaPredicted RBP18.99■□□□□ 0.63
LITAF-220ENST00000620789 EGFP01133 1207 aa18.99■□□□□ 0.63
LITAF-220ENST00000620789 PENKP01210 267 aaPredicted RBP18.99■□□□□ 0.63
LITAF-220ENST00000620789 CYBBP04839 570 aa18.99■□□□□ 0.63
LITAF-220ENST00000620789 SLC2A3P11169 496 aa18.99■□□□□ 0.63
LITAF-220ENST00000620789 CCR1P32246 355 aa18.99■□□□□ 0.63
LITAF-220ENST00000620789 NME3Q13232 169 aa18.99■□□□□ 0.63
LITAF-220ENST00000620789 ARID5BQ14865 1188 aa18.99■□□□□ 0.63
LITAF-220ENST00000620789 SLC25A52Q3SY17 297 aa18.99■□□□□ 0.63
LITAF-220ENST00000620789 TRNP1Q6NT89 227 aa18.99■□□□□ 0.63
LITAF-220ENST00000620789 VPS36Q86VN1 386 aa18.99■□□□□ 0.63
LITAF-220ENST00000620789 EMC1Q8N766 993 aa18.99■□□□□ 0.63
LITAF-220ENST00000620789 BHMTQ93088 406 aa18.99■□□□□ 0.63
LITAF-220ENST00000620789 PGAP3Q96FM1 320 aaPredicted RBP18.99■□□□□ 0.63
LITAF-220ENST00000620789 P2RY11Q96G91 374 aa18.99■□□□□ 0.63
LITAF-220ENST00000620789 VCPIP1Q96JH7 1222 aa18.99■□□□□ 0.63
LITAF-220ENST00000620789 XPO6Q96QU8 1125 aaKnown RBP18.99■□□□□ 0.63
LITAF-220ENST00000620789 DNAJC7Q99615 494 aa18.99■□□□□ 0.63
LITAF-220ENST00000620789 IER2Q9BTL4 223 aa18.99■□□□□ 0.63
LITAF-220ENST00000620789 ADAM33Q9BZ11 813 aa18.99■□□□□ 0.63
LITAF-220ENST00000620789 COX16Q9P0S2 106 aa18.99■□□□□ 0.63
LITAF-220ENST00000620789 CALCOCO1Q9P1Z2 691 aa18.99■□□□□ 0.63
LITAF-220ENST00000620789 DEC1Q9P2X7 70 aa18.99■□□□□ 0.63
LITAF-220ENST00000620789 HCN4Q9Y3Q4 1203 aa18.99■□□□□ 0.63
LITAF-220ENST00000620789 TCRBV5S1A1TA0A578 114 aa18.98■□□□□ 0.63
LITAF-220ENST00000620789 GALR2O43603 387 aaPredicted RBP18.98■□□□□ 0.63
LITAF-220ENST00000620789 PLEKP08567 350 aaPredicted RBP18.98■□□□□ 0.63
LITAF-220ENST00000620789 KRT3P12035 628 aa18.98■□□□□ 0.63
LITAF-220ENST00000620789 TFE3P19532 575 aaPredicted RBP18.98■□□□□ 0.63
LITAF-220ENST00000620789 KDSRQ06136 332 aa18.98■□□□□ 0.63
LITAF-220ENST00000620789 MESP2Q0VG99 397 aa18.98■□□□□ 0.63
LITAF-220ENST00000620789 PPP2R5DQ14738 602 aa18.98■□□□□ 0.63
LITAF-220ENST00000620789 FBXO43Q4G163 708 aa18.98■□□□□ 0.63
LITAF-220ENST00000620789 PREPLQ4J6C6 727 aaPredicted RBP18.98■□□□□ 0.63
LITAF-220ENST00000620789 MPPE1Q53F39 396 aa18.98■□□□□ 0.63
LITAF-220ENST00000620789 FAM133BQ5BKY9 247 aaKnown RBP18.98■□□□□ 0.63
LITAF-220ENST00000620789 NADSYN1Q6IA69 706 aa18.98■□□□□ 0.63
LITAF-220ENST00000620789 DNAJC24Q6P3W2 148 aa18.98■□□□□ 0.63
LITAF-220ENST00000620789 TMC6Q7Z403 805 aa18.98■□□□□ 0.63
LITAF-220ENST00000620789 DRC7Q8IY82 874 aa18.98■□□□□ 0.63
LITAF-220ENST00000620789 PHTF2Q8N3S3 785 aa18.98■□□□□ 0.63
LITAF-220ENST00000620789 OR8K1Q8NGG5 319 aa18.98■□□□□ 0.63
LITAF-220ENST00000620789 JOSD2Q8TAC2 188 aa18.98■□□□□ 0.63
LITAF-220ENST00000620789 DDI1Q8WTU0 396 aa18.98■□□□□ 0.63
LITAF-220ENST00000620789 EZH1Q92800 747 aaPredicted RBP18.98■□□□□ 0.63
LITAF-220ENST00000620789 RNF34Q969K3 372 aa18.98■□□□□ 0.63
LITAF-220ENST00000620789 BTN2A3PQ96KV6 586 aa18.98■□□□□ 0.63
LITAF-220ENST00000620789 CFAP57Q96MR6 1250 aa18.98■□□□□ 0.63
LITAF-220ENST00000620789 TBCBQ99426 244 aa18.98■□□□□ 0.63
LITAF-220ENST00000620789 PRRX2Q99811 253 aa18.98■□□□□ 0.63
LITAF-220ENST00000620789 DDX50Q9BQ39 737 aaKnown RBP18.98■□□□□ 0.63
LITAF-220ENST00000620789 SELENOOQ9BVL4 669 aa18.98■□□□□ 0.63
LITAF-220ENST00000620789 IRX2Q9BZI1 471 aaPredicted RBP18.98■□□□□ 0.63
LITAF-220ENST00000620789 KCNH6Q9H252 994 aa18.98■□□□□ 0.63
LITAF-220ENST00000620789 ARHGEF4Q9NR80 690 aa18.98■□□□□ 0.63
LITAF-220ENST00000620789 PIGVQ9NUD9 493 aa18.98■□□□□ 0.63
LITAF-220ENST00000620789 DNAJC17Q9NVM6 304 aaKnown RBP18.98■□□□□ 0.63
LITAF-220ENST00000620789 TMEM51Q9NW97 253 aa18.98■□□□□ 0.63
LITAF-220ENST00000620789 PLK2Q9NYY3 685 aa18.98■□□□□ 0.63
LITAF-220ENST00000620789 ARHGAP20Q9P2F6 1191 aa18.98■□□□□ 0.63
LITAF-220ENST00000620789 ADAMTS1Q9UHI8 967 aa18.98■□□□□ 0.63
LITAF-220ENST00000620789 GOLGA6L7A0A1B0GV03 622 aa18.97■□□□□ 0.63
LITAF-220ENST00000620789 KCNU1A8MYU2 1149 aa18.97■□□□□ 0.63
LITAF-220ENST00000620789 TSPAN3O60637 253 aa18.97■□□□□ 0.63
LITAF-220ENST00000620789 MFAP3LO75121 409 aa18.97■□□□□ 0.63
LITAF-220ENST00000620789 RTN2O75298 545 aa18.97■□□□□ 0.63
LITAF-220ENST00000620789 KAT7O95251 611 aa18.97■□□□□ 0.63
LITAF-220ENST00000620789 GJB6O95452 261 aa18.97■□□□□ 0.63
LITAF-220ENST00000620789 F9P00740 461 aa18.97■□□□□ 0.63
LITAF-220ENST00000620789 APODP05090 189 aa18.97■□□□□ 0.63
LITAF-220ENST00000620789 ABCB4P21439 1286 aa18.97■□□□□ 0.63
LITAF-220ENST00000620789 RRM1P23921 792 aa18.97■□□□□ 0.63
LITAF-220ENST00000620789 SLC6A4P31645 630 aa18.97■□□□□ 0.63
LITAF-220ENST00000620789 GRIA2P42262 883 aa18.97■□□□□ 0.63
LITAF-220ENST00000620789 ZNF75DP51815 510 aa18.97■□□□□ 0.63
LITAF-220ENST00000620789 DEUP1Q05D60 604 aa18.97■□□□□ 0.63
LITAF-220ENST00000620789 TBX2Q13207 712 aaPredicted RBP18.97■□□□□ 0.63
LITAF-220ENST00000620789 RFWD3Q6PCD5 774 aa18.97■□□□□ 0.63
LITAF-220ENST00000620789 Q6ZS52 159 aa18.97■□□□□ 0.63
LITAF-220ENST00000620789 BNIPLQ7Z465 357 aa18.97■□□□□ 0.63
LITAF-220ENST00000620789 ATP6V0D2Q8N8Y2 350 aa18.97■□□□□ 0.63
LITAF-220ENST00000620789 TMA16Q96EY4 203 aaKnown RBP18.97■□□□□ 0.63
LITAF-220ENST00000620789 MRFAP1L1Q96HT8 127 aa18.97■□□□□ 0.63
LITAF-220ENST00000620789 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.97■□□□□ 0.63
LITAF-220ENST00000620789 ABHD10Q9NUJ1 306 aa18.97■□□□□ 0.63
LITAF-220ENST00000620789 SPATA6Q9NWH7 488 aaPredicted RBP18.97■□□□□ 0.63
LITAF-220ENST00000620789 SLC12A6Q9UHW9 1150 aa18.97■□□□□ 0.63
LITAF-220ENST00000620789 XPO7Q9UIA9 1087 aaKnown RBP18.97■□□□□ 0.63
LITAF-220ENST00000620789 FBXO10Q9UK96 956 aa18.97■□□□□ 0.63
LITAF-220ENST00000620789 A0A0A0MRY4 1105 aa18.96■□□□□ 0.63
LITAF-220ENST00000620789 C2CD4BA6NLJ0 364 aa18.96■□□□□ 0.63
LITAF-220ENST00000620789 SIGLEC16A6NMB1 481 aa18.96■□□□□ 0.63
LITAF-220ENST00000620789 RNF40O75150 1001 aa18.96■□□□□ 0.63
LITAF-220ENST00000620789 FTLP02792 175 aaPredicted RBP18.96■□□□□ 0.63
LITAF-220ENST00000620789 PDGFRAP16234 1089 aa18.96■□□□□ 0.63
LITAF-220ENST00000620789 COL9A1P20849 921 aa18.96■□□□□ 0.63
LITAF-220ENST00000620789 SDC4P31431 198 aa18.96■□□□□ 0.63
LITAF-220ENST00000620789 RFC1P35251 1148 aaPredicted RBP18.96■□□□□ 0.63
LITAF-220ENST00000620789 CXCR3P49682 368 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms